Protein–RNA interactions for Protein: O95639

CPSF4, Cleavage and polyadenylation specificity factor subunit 4, humanhuman

Known RBP Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4O95639 RNU6-1181P-201ENST00000384191 106 ntBASIC2.17□□□□□ -2.06
CPSF4O95639 RPL21P75-201ENST00000396599 483 ntBASIC2.17□□□□□ -2.06
CPSF4O95639 RPL21P28-201ENST00000401418 483 ntBASIC2.17□□□□□ -2.06
CPSF4O95639 AL592114.1-201ENST00000403842 483 ntBASIC2.17□□□□□ -2.06
CPSF4O95639 AL023807.1-201ENST00000407932 359 ntBASIC2.17□□□□□ -2.06
CPSF4O95639 RNU6ATAC16P-201ENST00000408591 138 ntBASIC2.17□□□□□ -2.06
CPSF4O95639 RN7SKP140-201ENST00000411196 284 ntBASIC2.17□□□□□ -2.06
CPSF4O95639 HMGN2P35-201ENST00000412164 270 ntBASIC2.17□□□□□ -2.06
CPSF4O95639 AF274854.1-201ENST00000413236 615 ntBASIC2.17□□□□□ -2.06
CPSF4O95639 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC2.17□□□□□ -2.06
CPSF4O95639 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC2.17□□□□□ -2.06
CPSF4O95639 RPS6P14-201ENST00000425165 719 ntBASIC2.17□□□□□ -2.06
CPSF4O95639 AC006548.1-201ENST00000427470 102 ntBASIC2.17□□□□□ -2.06
CPSF4O95639 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC2.17□□□□□ -2.06
CPSF4O95639 AC004022.1-201ENST00000447766 1066 ntBASIC2.17□□□□□ -2.06
CPSF4O95639 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC2.17□□□□□ -2.06
CPSF4O95639 RPL21P39-201ENST00000463605 483 ntBASIC2.17□□□□□ -2.06
CPSF4O95639 AC010285.1-201ENST00000470580 392 ntBASIC2.17□□□□□ -2.06
CPSF4O95639 AC011979.1-201ENST00000472300 483 ntBASIC2.17□□□□□ -2.06
CPSF4O95639 RPL21P93-201ENST00000480465 489 ntBASIC2.17□□□□□ -2.06
CPSF4O95639 AC233702.1-201ENST00000482905 502 ntBASIC2.17□□□□□ -2.06
CPSF4O95639 AC093591.1-201ENST00000491435 481 ntBASIC2.17□□□□□ -2.06
CPSF4O95639 RPL21P16-201ENST00000495531 483 ntBASIC2.17□□□□□ -2.06
CPSF4O95639 ARL4AP2-201ENST00000507378 601 ntBASIC2.17□□□□□ -2.06
CPSF4O95639 AC234781.5-201ENST00000508429 271 ntBASIC2.17□□□□□ -2.06
CPSF4O95639 SNORA31.20-201ENST00000517111 133 ntBASIC2.17□□□□□ -2.06
CPSF4O95639 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC2.17□□□□□ -2.06
CPSF4O95639 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.17□□□□□ -2.06
CPSF4O95639 AC239860.2-201ENST00000525886 270 ntBASIC2.17□□□□□ -2.06
CPSF4O95639 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC2.17□□□□□ -2.06
CPSF4O95639 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC2.17□□□□□ -2.06
CPSF4O95639 AC234778.2-201ENST00000566241 354 ntBASIC2.17□□□□□ -2.06
CPSF4O95639 AC023825.1-201ENST00000566704 1030 ntBASIC2.17□□□□□ -2.06
CPSF4O95639 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC2.17□□□□□ -2.06
CPSF4O95639 AC090330.1-201ENST00000588646 764 ntBASIC2.17□□□□□ -2.06
CPSF4O95639 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC2.17□□□□□ -2.06
CPSF4O95639 AC103881.1-201ENST00000603476 538 ntBASIC2.17□□□□□ -2.06
CPSF4O95639 AC103810.6-201ENST00000606708 136 ntBASIC2.17□□□□□ -2.06
CPSF4O95639 AP000238.1-201ENST00000608759 426 ntBASIC2.17□□□□□ -2.06
CPSF4O95639 AP005137.2-201ENST00000609238 400 ntBASIC2.17□□□□□ -2.06
CPSF4O95639 AL590282.1-201ENST00000610379 1136 ntBASIC2.17□□□□□ -2.06
CPSF4O95639 AC008759.3-201ENST00000613300 508 ntBASIC2.17□□□□□ -2.06
CPSF4O95639 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
CPSF4O95639 AC073968.1-201ENST00000618594 637 ntBASIC2.17□□□□□ -2.06
CPSF4O95639 CR381572.1-201ENST00000625098 102 ntBASIC2.17□□□□□ -2.06
CPSF4O95639 AC111188.2-201ENST00000529697 1387 ntBASIC2.17□□□□□ -2.06
CPSF4O95639 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC2.17□□□□□ -2.06
CPSF4O95639 AC016717.2-201ENST00000609089 5141 ntBASIC2.17□□□□□ -2.06
CPSF4O95639 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
CPSF4O95639 AP002907.1-201ENST00000606361 1430 ntBASIC2.17□□□□□ -2.06
CPSF4O95639 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.16□□□□□ -2.06
CPSF4O95639 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC2.16□□□□□ -2.06
CPSF4O95639 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC2.16□□□□□ -2.06
CPSF4O95639 THUMPD3P1-201ENST00000506556 1480 ntBASIC2.16□□□□□ -2.06
CPSF4O95639 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
CPSF4O95639 VTRNA1-1-201ENST00000363120 99 ntBASIC2.16□□□□□ -2.06
CPSF4O95639 RNU6-251P-201ENST00000363235 104 ntBASIC2.16□□□□□ -2.06
CPSF4O95639 RNU5B-4P-201ENST00000363508 111 ntBASIC2.16□□□□□ -2.06
CPSF4O95639 AL603865.2-201ENST00000401679 213 ntBASIC2.16□□□□□ -2.06
CPSF4O95639 RPL19P1-201ENST00000411635 428 ntBASIC2.16□□□□□ -2.06
CPSF4O95639 Z92545.1-201ENST00000411782 234 ntBASIC2.16□□□□□ -2.06
CPSF4O95639 AL136133.1-201ENST00000413694 376 ntBASIC2.16□□□□□ -2.06
CPSF4O95639 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC2.16□□□□□ -2.06
CPSF4O95639 OFD1P2Y-201ENST00000421895 1149 ntBASIC2.16□□□□□ -2.06
CPSF4O95639 HSFY1P1-201ENST00000423928 1178 ntBASIC2.16□□□□□ -2.06
CPSF4O95639 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC2.16□□□□□ -2.06
CPSF4O95639 MTCYBP32-201ENST00000427945 1084 ntBASIC2.16□□□□□ -2.06
CPSF4O95639 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC2.16□□□□□ -2.06
CPSF4O95639 AC129850.1-201ENST00000436203 508 ntBASIC2.16□□□□□ -2.06
CPSF4O95639 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC2.16□□□□□ -2.06
CPSF4O95639 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC2.16□□□□□ -2.06
CPSF4O95639 AL034418.1-201ENST00000448675 860 ntBASIC2.16□□□□□ -2.06
CPSF4O95639 NPM1P13-201ENST00000452663 865 ntBASIC2.16□□□□□ -2.06
CPSF4O95639 RPS24P6-201ENST00000452670 400 ntBASIC2.16□□□□□ -2.06
CPSF4O95639 HMGB1P15-201ENST00000453854 435 ntBASIC2.16□□□□□ -2.06
CPSF4O95639 RPS3P1-201ENST00000456781 192 ntBASIC2.16□□□□□ -2.06
CPSF4O95639 MTCO3P2-201ENST00000457365 171 ntBASIC2.16□□□□□ -2.06
CPSF4O95639 PABPC1P3-201ENST00000469174 459 ntBASIC2.16□□□□□ -2.06
CPSF4O95639 AC126389.1-201ENST00000477436 290 ntBASIC2.16□□□□□ -2.06
CPSF4O95639 GAPDHP39-201ENST00000481866 979 ntBASIC2.16□□□□□ -2.06
CPSF4O95639 AL024509.2-201ENST00000493462 493 ntBASIC2.16□□□□□ -2.06
CPSF4O95639 RN7SL636P-201ENST00000497504 294 ntBASIC2.16□□□□□ -2.06
CPSF4O95639 AC084024.2-201ENST00000503480 791 ntBASIC2.16□□□□□ -2.06
CPSF4O95639 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC2.16□□□□□ -2.06
CPSF4O95639 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC2.16□□□□□ -2.06
CPSF4O95639 TTC39CP1-201ENST00000512513 755 ntBASIC2.16□□□□□ -2.06
CPSF4O95639 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC2.16□□□□□ -2.06
CPSF4O95639 RNU4-29P-201ENST00000515943 174 ntBASIC2.16□□□□□ -2.06
CPSF4O95639 RNA5SP24-201ENST00000516478 95 ntBASIC2.16□□□□□ -2.06
CPSF4O95639 SNORA31.11-201ENST00000516528 139 ntBASIC2.16□□□□□ -2.06
CPSF4O95639 RNU6-56P-201ENST00000516986 93 ntBASIC2.16□□□□□ -2.06
CPSF4O95639 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC2.16□□□□□ -2.06
CPSF4O95639 AC023632.1-201ENST00000518463 375 ntBASIC2.16□□□□□ -2.06
CPSF4O95639 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC2.16□□□□□ -2.06
CPSF4O95639 AP003066.2-201ENST00000529375 555 ntBASIC2.16□□□□□ -2.06
CPSF4O95639 ZNF705CP-201ENST00000530515 889 ntBASIC2.16□□□□□ -2.06
CPSF4O95639 SMILR-201ENST00000533992 553 ntTSL 4 BASIC2.16□□□□□ -2.06
CPSF4O95639 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
CPSF4O95639 AC093519.1-201ENST00000566109 298 ntBASIC2.16□□□□□ -2.06
CPSF4O95639 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC2.16□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 123.4 ms