Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
RNF40O75150 RNU6-153P-201ENST00000364422 104 ntBASIC6.29□□□□□ -1.4
RNF40O75150 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC6.29□□□□□ -1.4
RNF40O75150 RNU6-933P-201ENST00000384424 107 ntBASIC6.29□□□□□ -1.4
RNF40O75150 RNU6-131P-201ENST00000391144 107 ntBASIC6.29□□□□□ -1.4
RNF40O75150 RNU2-21P-201ENST00000410368 188 ntBASIC6.29□□□□□ -1.4
RNF40O75150 RNU6-607P-201ENST00000411283 108 ntBASIC6.29□□□□□ -1.4
RNF40O75150 CYCSP33-201ENST00000414485 327 ntBASIC6.29□□□□□ -1.4
RNF40O75150 RPL21P90-201ENST00000415692 466 ntBASIC6.29□□□□□ -1.4
RNF40O75150 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC6.29□□□□□ -1.4
RNF40O75150 RPS15AP6-201ENST00000420703 385 ntBASIC6.29□□□□□ -1.4
RNF40O75150 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC6.29□□□□□ -1.4
RNF40O75150 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC6.29□□□□□ -1.4
RNF40O75150 AC006484.1-201ENST00000435086 1884 ntBASIC6.29□□□□□ -1.4
RNF40O75150 FTLP8-201ENST00000446770 267 ntBASIC6.29□□□□□ -1.4
RNF40O75150 Z92846.1-201ENST00000456203 268 ntBASIC6.29□□□□□ -1.4
RNF40O75150 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC6.29□□□□□ -1.4
RNF40O75150 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC6.29□□□□□ -1.4
RNF40O75150 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC6.29□□□□□ -1.4
RNF40O75150 AL162424.1-201ENST00000602325 221 ntBASIC6.29□□□□□ -1.4
RNF40O75150 MIR6793-201ENST00000612376 63 ntBASIC6.29□□□□□ -1.4
RNF40O75150 AL512624.1-201ENST00000613638 469 ntBASIC6.29□□□□□ -1.4
RNF40O75150 AL136228.1-201ENST00000622221 319 ntBASIC6.29□□□□□ -1.4
RNF40O75150 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC6.29□□□□□ -1.4
RNF40O75150 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
RNF40O75150 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC6.29□□□□□ -1.4
RNF40O75150 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC6.29□□□□□ -1.4
RNF40O75150 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC6.29□□□□□ -1.4
RNF40O75150 PANDAR-201ENST00000629595 1506 ntBASIC6.29□□□□□ -1.4
RNF40O75150 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC6.29□□□□□ -1.4
RNF40O75150 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC6.29□□□□□ -1.4
RNF40O75150 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
RNF40O75150 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC6.28□□□□□ -1.4
RNF40O75150 AC024587.1-201ENST00000505925 2157 ntBASIC6.28□□□□□ -1.4
RNF40O75150 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC6.28□□□□□ -1.4
RNF40O75150 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
RNF40O75150 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
RNF40O75150 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
RNF40O75150 Y_RNA.353-201ENST00000365440 108 ntBASIC6.28□□□□□ -1.4
RNF40O75150 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
RNF40O75150 RNU6-44P-201ENST00000384045 107 ntBASIC6.28□□□□□ -1.4
RNF40O75150 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
RNF40O75150 RNU11-4P-201ENST00000391149 133 ntBASIC6.28□□□□□ -1.4
RNF40O75150 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC6.28□□□□□ -1.4
RNF40O75150 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
RNF40O75150 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
RNF40O75150 CYCSP43-201ENST00000438233 310 ntBASIC6.28□□□□□ -1.4
RNF40O75150 RPL36AP39-201ENST00000445859 318 ntBASIC6.28□□□□□ -1.4
RNF40O75150 PRDX3P3-201ENST00000447765 522 ntBASIC6.28□□□□□ -1.4
RNF40O75150 BTF3P6-201ENST00000448054 499 ntBASIC6.28□□□□□ -1.4
RNF40O75150 AP006222.1-205ENST00000450734 457 ntBASIC6.28□□□□□ -1.4
RNF40O75150 RANP2-201ENST00000456833 229 ntBASIC6.28□□□□□ -1.4
RNF40O75150 RPS27P26-201ENST00000494583 239 ntBASIC6.28□□□□□ -1.4
RNF40O75150 AC016065.2-201ENST00000514530 444 ntBASIC6.28□□□□□ -1.4
RNF40O75150 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC6.28□□□□□ -1.4
RNF40O75150 AC027288.2-201ENST00000553028 243 ntBASIC6.28□□□□□ -1.4
RNF40O75150 FKBP1BP1-201ENST00000553366 325 ntBASIC6.28□□□□□ -1.4
RNF40O75150 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC6.28□□□□□ -1.4
RNF40O75150 AC006077.1-201ENST00000604746 343 ntBASIC6.28□□□□□ -1.4
RNF40O75150 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC6.28□□□□□ -1.4
RNF40O75150 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC6.28□□□□□ -1.4
RNF40O75150 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
RNF40O75150 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC6.28□□□□□ -1.4
RNF40O75150 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
RNF40O75150 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
RNF40O75150 AC239868.2-201ENST00000564237 4527 ntBASIC6.27□□□□□ -1.4
RNF40O75150 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC6.27□□□□□ -1.4
RNF40O75150 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC6.27□□□□□ -1.41
RNF40O75150 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
RNF40O75150 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC6.27□□□□□ -1.41
RNF40O75150 CRP-204ENST00000368112 787 ntTSL 2 BASIC6.27□□□□□ -1.41
RNF40O75150 Y_RNA.568-201ENST00000384742 113 ntBASIC6.27□□□□□ -1.41
RNF40O75150 MIR92A2-201ENST00000385299 75 ntBASIC6.27□□□□□ -1.41
RNF40O75150 MIR1203-201ENST00000408812 85 ntBASIC6.27□□□□□ -1.41
RNF40O75150 RNU6-651P-201ENST00000411040 105 ntBASIC6.27□□□□□ -1.41
RNF40O75150 RPL23AP36-201ENST00000413895 458 ntBASIC6.27□□□□□ -1.41
RNF40O75150 AL031736.2-201ENST00000426573 787 ntBASIC6.27□□□□□ -1.41
RNF40O75150 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC6.27□□□□□ -1.41
RNF40O75150 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC6.27□□□□□ -1.41
RNF40O75150 AP001324.2-201ENST00000461163 319 ntBASIC6.27□□□□□ -1.41
RNF40O75150 AC010326.1-201ENST00000462726 602 ntBASIC6.27□□□□□ -1.41
RNF40O75150 AC133134.1-201ENST00000466800 359 ntBASIC6.27□□□□□ -1.41
RNF40O75150 NDUFB5P1-201ENST00000508134 564 ntBASIC6.27□□□□□ -1.41
RNF40O75150 SSX6-203ENST00000509958 336 ntTSL 3 BASIC6.27□□□□□ -1.41
RNF40O75150 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC6.27□□□□□ -1.41
RNF40O75150 AC091144.1-201ENST00000519573 138 ntBASIC6.27□□□□□ -1.41
RNF40O75150 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
RNF40O75150 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
RNF40O75150 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC6.27□□□□□ -1.41
RNF40O75150 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC6.27□□□□□ -1.41
RNF40O75150 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC6.27□□□□□ -1.41
RNF40O75150 RPL12P48-201ENST00000605620 304 ntBASIC6.27□□□□□ -1.41
RNF40O75150 Y_RNA.772-201ENST00000606692 102 ntBASIC6.27□□□□□ -1.41
RNF40O75150 AP005431.1-201ENST00000618479 319 ntBASIC6.27□□□□□ -1.41
RNF40O75150 AC097372.5-201ENST00000623665 376 ntBASIC6.27□□□□□ -1.41
RNF40O75150 CYP4F35P-202ENST00000636121 390 ntBASIC6.27□□□□□ -1.41
RNF40O75150 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
RNF40O75150 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
RNF40O75150 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC6.27□□□□□ -1.41
RNF40O75150 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 124.8 ms