Protein–RNA interactions for Protein: O15347

HMGB3, High mobility group protein B3, humanhuman

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3O15347 AC233981.1-201ENST00000423224 461 ntBASIC1.93□□□□□ -2.1
HMGB3O15347 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC1.93□□□□□ -2.1
HMGB3O15347 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC1.93□□□□□ -2.1
HMGB3O15347 AL139132.1-201ENST00000431587 344 ntBASIC1.93□□□□□ -2.1
HMGB3O15347 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC1.93□□□□□ -2.1
HMGB3O15347 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC1.93□□□□□ -2.1
HMGB3O15347 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC1.93□□□□□ -2.1
HMGB3O15347 AC099677.4-201ENST00000446786 380 ntTSL 3 BASIC1.93□□□□□ -2.1
HMGB3O15347 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC1.93□□□□□ -2.1
HMGB3O15347 RPL30P5-201ENST00000494923 336 ntBASIC1.93□□□□□ -2.1
HMGB3O15347 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC1.93□□□□□ -2.1
HMGB3O15347 SAP18P1-201ENST00000512058 390 ntBASIC1.93□□□□□ -2.1
HMGB3O15347 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC1.93□□□□□ -2.1
HMGB3O15347 SNORA31.18-201ENST00000517043 134 ntBASIC1.93□□□□□ -2.1
HMGB3O15347 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC1.93□□□□□ -2.1
HMGB3O15347 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC1.93□□□□□ -2.1
HMGB3O15347 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC1.93□□□□□ -2.1
HMGB3O15347 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC1.93□□□□□ -2.1
HMGB3O15347 AC130650.1-201ENST00000570581 415 ntTSL 2 BASIC1.93□□□□□ -2.1
HMGB3O15347 RPS3AP23-202ENST00000574601 686 ntBASIC1.93□□□□□ -2.1
HMGB3O15347 MIR3616-201ENST00000584070 92 ntBASIC1.93□□□□□ -2.1
HMGB3O15347 AC061975.8-201ENST00000587058 721 ntBASIC1.93□□□□□ -2.1
HMGB3O15347 AC093227.2-201ENST00000589357 285 ntBASIC1.93□□□□□ -2.1
HMGB3O15347 AL022099.1-201ENST00000604551 712 ntBASIC1.93□□□□□ -2.1
HMGB3O15347 MIR6810-201ENST00000622701 70 ntBASIC1.93□□□□□ -2.1
HMGB3O15347 DUXAP9-208ENST00000622815 614 ntBASIC1.93□□□□□ -2.1
HMGB3O15347 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC1.93□□□□□ -2.1
HMGB3O15347 NUP58P1-201ENST00000502546 1738 ntBASIC1.93□□□□□ -2.1
HMGB3O15347 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC1.93□□□□□ -2.1
HMGB3O15347 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC1.93□□□□□ -2.1
HMGB3O15347 POMP-202ENST00000460403 1428 ntTSL 3 BASIC1.92□□□□□ -2.1
HMGB3O15347 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC1.92□□□□□ -2.1
HMGB3O15347 SNORA6-201ENST00000384033 151 ntBASIC1.92□□□□□ -2.1
HMGB3O15347 NDUFB4P4-201ENST00000404822 243 ntBASIC1.92□□□□□ -2.1
HMGB3O15347 U3.37-201ENST00000408528 213 ntBASIC1.92□□□□□ -2.1
HMGB3O15347 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
HMGB3O15347 RPL7P44-201ENST00000424827 742 ntBASIC1.92□□□□□ -2.1
HMGB3O15347 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC1.92□□□□□ -2.1
HMGB3O15347 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC1.92□□□□□ -2.1
HMGB3O15347 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC1.92□□□□□ -2.1
HMGB3O15347 AC107626.1-201ENST00000471084 183 ntBASIC1.92□□□□□ -2.1
HMGB3O15347 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC1.92□□□□□ -2.1
HMGB3O15347 HIGD1AP13-201ENST00000509878 289 ntBASIC1.92□□□□□ -2.1
HMGB3O15347 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC1.92□□□□□ -2.1
HMGB3O15347 RNA5SP341-201ENST00000516261 117 ntBASIC1.92□□□□□ -2.1
HMGB3O15347 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC1.92□□□□□ -2.1
HMGB3O15347 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC1.92□□□□□ -2.1
HMGB3O15347 LSM6P2-201ENST00000552208 177 ntBASIC1.92□□□□□ -2.1
HMGB3O15347 AC078814.3-201ENST00000553036 491 ntBASIC1.92□□□□□ -2.1
HMGB3O15347 AC023824.2-201ENST00000566185 400 ntBASIC1.92□□□□□ -2.1
HMGB3O15347 AC034105.4-201ENST00000568304 277 ntBASIC1.92□□□□□ -2.1
HMGB3O15347 AC011471.1-201ENST00000585766 187 ntBASIC1.92□□□□□ -2.1
HMGB3O15347 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC1.92□□□□□ -2.1
HMGB3O15347 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
HMGB3O15347 AC009090.3-201ENST00000616553 565 ntBASIC1.92□□□□□ -2.1
HMGB3O15347 FRG1HP-204ENST00000617940 757 ntBASIC1.92□□□□□ -2.1
HMGB3O15347 AC012314.7-201ENST00000619693 93 ntBASIC1.92□□□□□ -2.1
HMGB3O15347 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
HMGB3O15347 AC012640.5-201ENST00000623897 319 ntBASIC1.92□□□□□ -2.1
HMGB3O15347 AL022578.1-201ENST00000439330 1433 ntBASIC1.91□□□□□ -2.1
HMGB3O15347 ZNF720P1-201ENST00000562403 1939 ntBASIC1.91□□□□□ -2.1
HMGB3O15347 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
HMGB3O15347 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
HMGB3O15347 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
HMGB3O15347 ZBTB8OSP1-201ENST00000342688 498 ntBASIC1.91□□□□□ -2.1
HMGB3O15347 SNORD82-201ENST00000365530 70 ntBASIC1.91□□□□□ -2.1
HMGB3O15347 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
HMGB3O15347 MIR134-201ENST00000385258 73 ntBASIC1.91□□□□□ -2.1
HMGB3O15347 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
HMGB3O15347 UBA52P6-201ENST00000399822 382 ntBASIC1.91□□□□□ -2.1
HMGB3O15347 RNU6ATAC16P-201ENST00000408591 138 ntBASIC1.91□□□□□ -2.1
HMGB3O15347 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC1.91□□□□□ -2.1
HMGB3O15347 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC1.91□□□□□ -2.1
HMGB3O15347 AL158825.1-201ENST00000414735 521 ntBASIC1.91□□□□□ -2.1
HMGB3O15347 ZNF92P1Y-201ENST00000415010 1191 ntBASIC1.91□□□□□ -2.1
HMGB3O15347 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC1.91□□□□□ -2.1
HMGB3O15347 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC1.91□□□□□ -2.1
HMGB3O15347 ARL4AP4-201ENST00000434170 518 ntBASIC1.91□□□□□ -2.1
HMGB3O15347 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC1.91□□□□□ -2.1
HMGB3O15347 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
HMGB3O15347 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC1.91□□□□□ -2.1
HMGB3O15347 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC1.91□□□□□ -2.1
HMGB3O15347 RPS15AP27-201ENST00000449183 343 ntBASIC1.91□□□□□ -2.1
HMGB3O15347 RNU6-420P-201ENST00000458780 107 ntBASIC1.91□□□□□ -2.1
HMGB3O15347 RNU7-23P-201ENST00000459465 62 ntBASIC1.91□□□□□ -2.1
HMGB3O15347 RPL31P60-201ENST00000478450 367 ntBASIC1.91□□□□□ -2.1
HMGB3O15347 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
HMGB3O15347 NAA50-206ENST00000493454 964 ntTSL 2 BASIC1.91□□□□□ -2.1
HMGB3O15347 MTCYBP17-201ENST00000503579 789 ntBASIC1.91□□□□□ -2.1
HMGB3O15347 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC1.91□□□□□ -2.1
HMGB3O15347 AC074250.1-201ENST00000511117 192 ntBASIC1.91□□□□□ -2.1
HMGB3O15347 RNU6-27P-201ENST00000516146 107 ntBASIC1.91□□□□□ -2.1
HMGB3O15347 AP003467.2-201ENST00000520175 319 ntBASIC1.91□□□□□ -2.1
HMGB3O15347 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC1.91□□□□□ -2.1
HMGB3O15347 OR4R2P-201ENST00000530815 597 ntBASIC1.91□□□□□ -2.1
HMGB3O15347 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC1.91□□□□□ -2.1
HMGB3O15347 AC243972.3-201ENST00000539655 198 ntBASIC1.91□□□□□ -2.1
HMGB3O15347 AC022080.3-201ENST00000544433 482 ntBASIC1.91□□□□□ -2.1
HMGB3O15347 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC1.91□□□□□ -2.1
HMGB3O15347 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC1.91□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 106.8 ms