Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 AL161734.1-201ENST00000609720 557 ntBASIC4.26□□□□□ -1.73
FOXN3O00409 AC103710.1-201ENST00000610003 901 ntBASIC4.26□□□□□ -1.73
FOXN3O00409 MIR6867-201ENST00000610636 67 ntBASIC4.26□□□□□ -1.73
FOXN3O00409 MIR6758-201ENST00000620653 63 ntBASIC4.26□□□□□ -1.73
FOXN3O00409 MIR6830-201ENST00000636015 70 ntBASIC4.26□□□□□ -1.73
FOXN3O00409 AC244258.1-201ENST00000637553 1071 ntBASIC4.26□□□□□ -1.73
FOXN3O00409 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC4.26□□□□□ -1.73
FOXN3O00409 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
FOXN3O00409 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.26□□□□□ -1.73
FOXN3O00409 AL365440.1-201ENST00000436135 2167 ntBASIC4.26□□□□□ -1.73
FOXN3O00409 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC4.26□□□□□ -1.73
FOXN3O00409 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
FOXN3O00409 API5-210ENST00000534600 1760 ntTSL 5 BASIC4.25□□□□□ -1.73
FOXN3O00409 AC027290.2-201ENST00000623210 18662 ntBASIC4.25□□□□□ -1.73
FOXN3O00409 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC4.25□□□□□ -1.73
FOXN3O00409 RNU6-278P-201ENST00000390945 109 ntBASIC4.25□□□□□ -1.73
FOXN3O00409 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
FOXN3O00409 RPA3-203ENST00000401447 414 ntTSL 3 BASIC4.25□□□□□ -1.73
FOXN3O00409 Y_RNA.604-201ENST00000410574 102 ntBASIC4.25□□□□□ -1.73
FOXN3O00409 RN7SKP159-201ENST00000410657 292 ntBASIC4.25□□□□□ -1.73
FOXN3O00409 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC4.25□□□□□ -1.73
FOXN3O00409 AC099677.1-201ENST00000420575 175 ntBASIC4.25□□□□□ -1.73
FOXN3O00409 AC007283.2-201ENST00000424739 197 ntBASIC4.25□□□□□ -1.73
FOXN3O00409 TRIM60P10Y-201ENST00000425589 751 ntBASIC4.25□□□□□ -1.73
FOXN3O00409 GAS5-208ENST00000425771 242 ntTSL 3 BASIC4.25□□□□□ -1.73
FOXN3O00409 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC4.25□□□□□ -1.73
FOXN3O00409 AC087650.1-201ENST00000431445 468 ntBASIC4.25□□□□□ -1.73
FOXN3O00409 RPL21P112-201ENST00000434403 463 ntBASIC4.25□□□□□ -1.73
FOXN3O00409 TRIM60P8Y-201ENST00000436338 762 ntBASIC4.25□□□□□ -1.73
FOXN3O00409 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
FOXN3O00409 AC083863.1-201ENST00000438811 231 ntBASIC4.25□□□□□ -1.73
FOXN3O00409 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC4.25□□□□□ -1.73
FOXN3O00409 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC4.25□□□□□ -1.73
FOXN3O00409 MTND1P9-201ENST00000453775 944 ntBASIC4.25□□□□□ -1.73
FOXN3O00409 MTCYBP1-201ENST00000454315 1119 ntBASIC4.25□□□□□ -1.73
FOXN3O00409 MTCO3P20-201ENST00000454926 688 ntBASIC4.25□□□□□ -1.73
FOXN3O00409 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC4.25□□□□□ -1.73
FOXN3O00409 RPS7P7-201ENST00000463499 571 ntBASIC4.25□□□□□ -1.73
FOXN3O00409 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC4.25□□□□□ -1.73
FOXN3O00409 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC4.25□□□□□ -1.73
FOXN3O00409 AL358832.1-201ENST00000497800 389 ntBASIC4.25□□□□□ -1.73
FOXN3O00409 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC4.25□□□□□ -1.73
FOXN3O00409 AC010587.1-201ENST00000505809 469 ntBASIC4.25□□□□□ -1.73
FOXN3O00409 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC4.25□□□□□ -1.73
FOXN3O00409 DUXAP2-201ENST00000519198 589 ntBASIC4.25□□□□□ -1.73
FOXN3O00409 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC4.25□□□□□ -1.73
FOXN3O00409 AC109635.4-202ENST00000531666 412 ntBASIC4.25□□□□□ -1.73
FOXN3O00409 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
FOXN3O00409 AC018630.1-201ENST00000541376 925 ntBASIC4.25□□□□□ -1.73
FOXN3O00409 AC091516.1-201ENST00000549191 703 ntBASIC4.25□□□□□ -1.73
FOXN3O00409 NTS-203ENST00000551529 801 ntTSL 3 BASIC4.25□□□□□ -1.73
FOXN3O00409 ARL1-211ENST00000551828 776 ntTSL 5 BASIC4.25□□□□□ -1.73
FOXN3O00409 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC4.25□□□□□ -1.73
FOXN3O00409 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC4.25□□□□□ -1.73
FOXN3O00409 AC099489.2-201ENST00000574976 260 ntBASIC4.25□□□□□ -1.73
FOXN3O00409 FAM60BP-201ENST00000578364 658 ntBASIC4.25□□□□□ -1.73
FOXN3O00409 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
FOXN3O00409 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC4.25□□□□□ -1.73
FOXN3O00409 DUXAP4-201ENST00000603046 613 ntBASIC4.25□□□□□ -1.73
FOXN3O00409 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC4.25□□□□□ -1.73
FOXN3O00409 AC087241.4-201ENST00000612441 480 ntBASIC4.25□□□□□ -1.73
FOXN3O00409 AL450472.3-201ENST00000615578 367 ntBASIC4.25□□□□□ -1.73
FOXN3O00409 AC006338.1-201ENST00000618453 749 ntBASIC4.25□□□□□ -1.73
FOXN3O00409 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC4.25□□□□□ -1.73
FOXN3O00409 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
FOXN3O00409 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC4.25□□□□□ -1.73
FOXN3O00409 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
FOXN3O00409 UBE3AP2-201ENST00000429033 2259 ntBASIC4.24□□□□□ -1.73
FOXN3O00409 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC4.24□□□□□ -1.73
FOXN3O00409 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
FOXN3O00409 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
FOXN3O00409 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC4.24□□□□□ -1.73
FOXN3O00409 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
FOXN3O00409 RNU6-882P-201ENST00000391025 103 ntBASIC4.24□□□□□ -1.73
FOXN3O00409 SNX10-203ENST00000409367 746 ntTSL 5 BASIC4.24□□□□□ -1.73
FOXN3O00409 FCF1P9-201ENST00000412546 282 ntBASIC4.24□□□□□ -1.73
FOXN3O00409 UBE2FP1-201ENST00000416536 447 ntBASIC4.24□□□□□ -1.73
FOXN3O00409 EI24P1-201ENST00000416584 867 ntBASIC4.24□□□□□ -1.73
FOXN3O00409 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
FOXN3O00409 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC4.24□□□□□ -1.73
FOXN3O00409 AC017083.1-201ENST00000428093 483 ntBASIC4.24□□□□□ -1.73
FOXN3O00409 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC4.24□□□□□ -1.73
FOXN3O00409 RPL31P35-201ENST00000431058 377 ntBASIC4.24□□□□□ -1.73
FOXN3O00409 AL358934.1-201ENST00000432346 324 ntBASIC4.24□□□□□ -1.73
FOXN3O00409 OR2B8P-201ENST00000432841 938 ntBASIC4.24□□□□□ -1.73
FOXN3O00409 TIMM9P1-201ENST00000436122 256 ntBASIC4.24□□□□□ -1.73
FOXN3O00409 CYCSP43-201ENST00000438233 310 ntBASIC4.24□□□□□ -1.73
FOXN3O00409 AC004866.2-201ENST00000438285 481 ntBASIC4.24□□□□□ -1.73
FOXN3O00409 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC4.24□□□□□ -1.73
FOXN3O00409 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC4.24□□□□□ -1.73
FOXN3O00409 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC4.24□□□□□ -1.73
FOXN3O00409 RPL9P33-201ENST00000484311 566 ntBASIC4.24□□□□□ -1.73
FOXN3O00409 AC135721.1-201ENST00000497954 479 ntBASIC4.24□□□□□ -1.73
FOXN3O00409 AC096751.1-202ENST00000502691 1067 ntBASIC4.24□□□□□ -1.73
FOXN3O00409 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC4.24□□□□□ -1.73
FOXN3O00409 RNU6-430P-201ENST00000517078 107 ntBASIC4.24□□□□□ -1.73
FOXN3O00409 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC4.24□□□□□ -1.73
FOXN3O00409 AC008489.1-201ENST00000524271 483 ntBASIC4.24□□□□□ -1.73
FOXN3O00409 DEFB108D-201ENST00000527787 222 ntBASIC4.24□□□□□ -1.73
FOXN3O00409 AP000857.1-201ENST00000532151 543 ntBASIC4.24□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 122.7 ms