Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 RPS4XP3-201ENST00000398541 413 ntBASIC3.11□□□□□ -1.91
SLC28A1O00337 RNU6-1077P-201ENST00000410506 102 ntBASIC3.11□□□□□ -1.91
SLC28A1O00337 RPS29P4-201ENST00000414733 161 ntBASIC3.11□□□□□ -1.91
SLC28A1O00337 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.11□□□□□ -1.91
SLC28A1O00337 AC012498.1-201ENST00000424037 437 ntBASIC3.11□□□□□ -1.91
SLC28A1O00337 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC3.11□□□□□ -1.91
SLC28A1O00337 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC3.11□□□□□ -1.91
SLC28A1O00337 AL359385.1-201ENST00000456509 365 ntBASIC3.11□□□□□ -1.91
SLC28A1O00337 AL049714.1-201ENST00000466686 347 ntBASIC3.11□□□□□ -1.91
SLC28A1O00337 RPL21P13-201ENST00000488305 481 ntBASIC3.11□□□□□ -1.91
SLC28A1O00337 AP001025.2-201ENST00000490908 477 ntBASIC3.11□□□□□ -1.91
SLC28A1O00337 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC3.11□□□□□ -1.91
SLC28A1O00337 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC3.11□□□□□ -1.91
SLC28A1O00337 RNU1-45P-201ENST00000517191 141 ntBASIC3.11□□□□□ -1.91
SLC28A1O00337 RNU6-711P-201ENST00000517255 106 ntBASIC3.11□□□□□ -1.91
SLC28A1O00337 AC026403.1-201ENST00000518938 295 ntBASIC3.11□□□□□ -1.91
SLC28A1O00337 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC3.11□□□□□ -1.91
SLC28A1O00337 HIGD1AP1-201ENST00000550979 275 ntBASIC3.11□□□□□ -1.91
SLC28A1O00337 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
SLC28A1O00337 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.11□□□□□ -1.91
SLC28A1O00337 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.11□□□□□ -1.91
SLC28A1O00337 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC3.11□□□□□ -1.91
SLC28A1O00337 AC073657.2-201ENST00000605661 303 ntBASIC3.11□□□□□ -1.91
SLC28A1O00337 AC004067.1-201ENST00000608733 700 ntBASIC3.11□□□□□ -1.91
SLC28A1O00337 AP000254.1-201ENST00000609934 520 ntBASIC3.11□□□□□ -1.91
SLC28A1O00337 MESTIT1_2.1-201ENST00000616328 235 ntBASIC3.11□□□□□ -1.91
SLC28A1O00337 MIR6076-201ENST00000617521 113 ntBASIC3.11□□□□□ -1.91
SLC28A1O00337 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
SLC28A1O00337 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.11□□□□□ -1.91
SLC28A1O00337 AL356863.1-201ENST00000623378 1080 ntBASIC3.11□□□□□ -1.91
SLC28A1O00337 AC008568.2-201ENST00000623862 2313 ntBASIC3.11□□□□□ -1.91
SLC28A1O00337 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.11□□□□□ -1.91
SLC28A1O00337 AC004972.1-201ENST00000623934 2209 ntBASIC3.11□□□□□ -1.91
SLC28A1O00337 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC3.1□□□□□ -1.91
SLC28A1O00337 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.1□□□□□ -1.91
SLC28A1O00337 AL079305.1-201ENST00000623159 3008 ntBASIC3.1□□□□□ -1.91
SLC28A1O00337 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
SLC28A1O00337 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC3.1□□□□□ -1.91
SLC28A1O00337 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
SLC28A1O00337 RNU5A-1-201ENST00000362698 116 ntBASIC3.1□□□□□ -1.91
SLC28A1O00337 U3.6-201ENST00000363622 211 ntBASIC3.1□□□□□ -1.91
SLC28A1O00337 MIR320C1-201ENST00000408566 88 ntBASIC3.1□□□□□ -1.91
SLC28A1O00337 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC3.1□□□□□ -1.91
SLC28A1O00337 HMGN1P24-201ENST00000412282 298 ntBASIC3.1□□□□□ -1.91
SLC28A1O00337 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.1□□□□□ -1.91
SLC28A1O00337 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC3.1□□□□□ -1.91
SLC28A1O00337 USP9YP36-201ENST00000424581 829 ntBASIC3.1□□□□□ -1.91
SLC28A1O00337 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC3.1□□□□□ -1.91
SLC28A1O00337 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.1□□□□□ -1.91
SLC28A1O00337 MTND1P32-201ENST00000433043 938 ntBASIC3.1□□□□□ -1.91
SLC28A1O00337 NDUFB4P6-201ENST00000436819 366 ntBASIC3.1□□□□□ -1.91
SLC28A1O00337 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC3.1□□□□□ -1.91
SLC28A1O00337 RPL23AP35-201ENST00000451906 501 ntBASIC3.1□□□□□ -1.91
SLC28A1O00337 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC3.1□□□□□ -1.91
SLC28A1O00337 AC104308.1-201ENST00000454621 333 ntBASIC3.1□□□□□ -1.91
SLC28A1O00337 ANKRD26P4-201ENST00000455755 950 ntBASIC3.1□□□□□ -1.91
SLC28A1O00337 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC3.1□□□□□ -1.91
SLC28A1O00337 RPL31P60-201ENST00000478450 367 ntBASIC3.1□□□□□ -1.91
SLC28A1O00337 RPL30P14-201ENST00000482744 348 ntBASIC3.1□□□□□ -1.91
SLC28A1O00337 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.1□□□□□ -1.91
SLC28A1O00337 AC034244.1-201ENST00000507687 207 ntBASIC3.1□□□□□ -1.91
SLC28A1O00337 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC3.1□□□□□ -1.91
SLC28A1O00337 MTCYBP43-201ENST00000513621 740 ntBASIC3.1□□□□□ -1.91
SLC28A1O00337 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC3.1□□□□□ -1.91
SLC28A1O00337 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC3.1□□□□□ -1.91
SLC28A1O00337 MTCO1P49-201ENST00000523429 802 ntBASIC3.1□□□□□ -1.91
SLC28A1O00337 AP003497.1-201ENST00000528472 562 ntBASIC3.1□□□□□ -1.91
SLC28A1O00337 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC3.1□□□□□ -1.91
SLC28A1O00337 AC023050.2-201ENST00000544968 387 ntBASIC3.1□□□□□ -1.91
SLC28A1O00337 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC3.1□□□□□ -1.91
SLC28A1O00337 AC011260.1-201ENST00000578420 472 ntBASIC3.1□□□□□ -1.91
SLC28A1O00337 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.1□□□□□ -1.91
SLC28A1O00337 RNU6-88P-201ENST00000606801 100 ntBASIC3.1□□□□□ -1.91
SLC28A1O00337 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC3.1□□□□□ -1.91
SLC28A1O00337 AL161637.1-201ENST00000622380 412 ntBASIC3.1□□□□□ -1.91
SLC28A1O00337 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC3.1□□□□□ -1.91
SLC28A1O00337 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC3.1□□□□□ -1.91
SLC28A1O00337 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
SLC28A1O00337 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
SLC28A1O00337 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
SLC28A1O00337 AC012321.1-201ENST00000561622 1588 ntBASIC3.09□□□□□ -1.91
SLC28A1O00337 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.09□□□□□ -1.91
SLC28A1O00337 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
SLC28A1O00337 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
SLC28A1O00337 SNORA1.3-201ENST00000384676 136 ntBASIC3.09□□□□□ -1.91
SLC28A1O00337 RPS3AP26-201ENST00000398259 784 ntBASIC3.09□□□□□ -1.91
SLC28A1O00337 RNA5SP38-201ENST00000410750 119 ntBASIC3.09□□□□□ -1.91
SLC28A1O00337 BX323014.1-201ENST00000412876 237 ntBASIC3.09□□□□□ -1.91
SLC28A1O00337 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC3.09□□□□□ -1.91
SLC28A1O00337 AL008987.1-201ENST00000415528 237 ntBASIC3.09□□□□□ -1.91
SLC28A1O00337 HSFY4P-201ENST00000415994 1181 ntBASIC3.09□□□□□ -1.91
SLC28A1O00337 MTCO2P21-201ENST00000419780 677 ntBASIC3.09□□□□□ -1.91
SLC28A1O00337 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.09□□□□□ -1.91
SLC28A1O00337 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC3.09□□□□□ -1.91
SLC28A1O00337 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC3.09□□□□□ -1.91
SLC28A1O00337 AC009969.1-201ENST00000438726 172 ntBASIC3.09□□□□□ -1.91
SLC28A1O00337 AC112653.1-201ENST00000443851 386 ntBASIC3.09□□□□□ -1.91
SLC28A1O00337 Z73417.1-201ENST00000447373 778 ntBASIC3.09□□□□□ -1.91
SLC28A1O00337 AL590664.1-201ENST00000448065 339 ntBASIC3.09□□□□□ -1.91
SLC28A1O00337 MTND1P9-201ENST00000453775 944 ntBASIC3.09□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 87.2 ms