Protein–RNA interactions for Protein: H3BMG3

SMKR1, Small lysine-rich protein 1, humanhuman

Predictions only

Length 65 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMKR1H3BMG3 HSFY6P-201ENST00000445573 403 ntBASIC2.3□□□□□ -2.04
SMKR1H3BMG3 DDX3P2-201ENST00000446138 111 ntBASIC2.3□□□□□ -2.04
SMKR1H3BMG3 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC2.3□□□□□ -2.04
SMKR1H3BMG3 GAPDHP27-201ENST00000447427 1020 ntBASIC2.3□□□□□ -2.04
SMKR1H3BMG3 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC2.3□□□□□ -2.04
SMKR1H3BMG3 ATG12P2-201ENST00000456830 416 ntBASIC2.3□□□□□ -2.04
SMKR1H3BMG3 AP1S2P1-201ENST00000457344 379 ntBASIC2.3□□□□□ -2.04
SMKR1H3BMG3 RPL21P41-201ENST00000459863 264 ntBASIC2.3□□□□□ -2.04
SMKR1H3BMG3 RPL21P39-201ENST00000463605 483 ntBASIC2.3□□□□□ -2.04
SMKR1H3BMG3 RPL31P41-201ENST00000477967 372 ntBASIC2.3□□□□□ -2.04
SMKR1H3BMG3 RPL21P93-201ENST00000480465 489 ntBASIC2.3□□□□□ -2.04
SMKR1H3BMG3 AC087190.1-201ENST00000484462 480 ntBASIC2.3□□□□□ -2.04
SMKR1H3BMG3 AC093591.1-201ENST00000491435 481 ntBASIC2.3□□□□□ -2.04
SMKR1H3BMG3 RPL21P129-201ENST00000491732 478 ntBASIC2.3□□□□□ -2.04
SMKR1H3BMG3 RPL21P16-201ENST00000495531 483 ntBASIC2.3□□□□□ -2.04
SMKR1H3BMG3 MTCO1P35-201ENST00000515270 228 ntBASIC2.3□□□□□ -2.04
SMKR1H3BMG3 RNU6-840P-201ENST00000517275 65 ntBASIC2.3□□□□□ -2.04
SMKR1H3BMG3 AC021451.1-201ENST00000523498 1129 ntBASIC2.3□□□□□ -2.04
SMKR1H3BMG3 MS4A3-208ENST00000534744 507 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
SMKR1H3BMG3 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC2.3□□□□□ -2.04
SMKR1H3BMG3 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC2.3□□□□□ -2.04
SMKR1H3BMG3 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC2.3□□□□□ -2.04
SMKR1H3BMG3 SETP2-201ENST00000553886 926 ntBASIC2.3□□□□□ -2.04
SMKR1H3BMG3 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC2.3□□□□□ -2.04
SMKR1H3BMG3 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC2.3□□□□□ -2.04
SMKR1H3BMG3 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC2.3□□□□□ -2.04
SMKR1H3BMG3 AC245389.1-201ENST00000605141 529 ntBASIC2.3□□□□□ -2.04
SMKR1H3BMG3 AC131902.3-201ENST00000611767 581 ntBASIC2.3□□□□□ -2.04
SMKR1H3BMG3 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC2.3□□□□□ -2.04
SMKR1H3BMG3 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
SMKR1H3BMG3 AC011477.1-204ENST00000623416 1325 ntBASIC2.3□□□□□ -2.04
SMKR1H3BMG3 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.3□□□□□ -2.04
SMKR1H3BMG3 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
SMKR1H3BMG3 DDX10P1-201ENST00000448545 1933 ntBASIC2.3□□□□□ -2.04
SMKR1H3BMG3 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC2.3□□□□□ -2.04
SMKR1H3BMG3 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
SMKR1H3BMG3 CR848007.1-201ENST00000442354 1699 ntBASIC2.29□□□□□ -2.04
SMKR1H3BMG3 DDX43P2-201ENST00000604753 1354 ntBASIC2.29□□□□□ -2.04
SMKR1H3BMG3 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
SMKR1H3BMG3 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
SMKR1H3BMG3 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
SMKR1H3BMG3 SNORA23-201ENST00000365128 182 ntBASIC2.29□□□□□ -2.04
SMKR1H3BMG3 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC2.29□□□□□ -2.04
SMKR1H3BMG3 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
SMKR1H3BMG3 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC2.29□□□□□ -2.04
SMKR1H3BMG3 RNU6-217P-201ENST00000384164 104 ntBASIC2.29□□□□□ -2.04
SMKR1H3BMG3 RNU6-114P-201ENST00000384704 105 ntBASIC2.29□□□□□ -2.04
SMKR1H3BMG3 MIR627-201ENST00000384979 97 ntBASIC2.29□□□□□ -2.04
SMKR1H3BMG3 RNU6-754P-201ENST00000391166 107 ntBASIC2.29□□□□□ -2.04
SMKR1H3BMG3 HIST1H2APS3-201ENST00000403259 134 ntBASIC2.29□□□□□ -2.04
SMKR1H3BMG3 RN7SKP123-201ENST00000410732 291 ntBASIC2.29□□□□□ -2.04
SMKR1H3BMG3 RAP1BP1-201ENST00000412709 553 ntBASIC2.29□□□□□ -2.04
SMKR1H3BMG3 MTND1P21-201ENST00000412991 285 ntBASIC2.29□□□□□ -2.04
SMKR1H3BMG3 MTATP6P19-201ENST00000413797 659 ntBASIC2.29□□□□□ -2.04
SMKR1H3BMG3 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC2.29□□□□□ -2.04
SMKR1H3BMG3 TEX41-203ENST00000420472 765 ntTSL 3 BASIC2.29□□□□□ -2.04
SMKR1H3BMG3 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC2.29□□□□□ -2.04
SMKR1H3BMG3 AC093151.1-201ENST00000427711 313 ntBASIC2.29□□□□□ -2.04
SMKR1H3BMG3 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC2.29□□□□□ -2.04
SMKR1H3BMG3 ATP5C1P1-201ENST00000441945 895 ntBASIC2.29□□□□□ -2.04
SMKR1H3BMG3 RPS12P18-201ENST00000442381 270 ntBASIC2.29□□□□□ -2.04
SMKR1H3BMG3 AC112653.1-201ENST00000443851 386 ntBASIC2.29□□□□□ -2.04
SMKR1H3BMG3 AL358232.1-201ENST00000448030 501 ntBASIC2.29□□□□□ -2.04
SMKR1H3BMG3 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC2.29□□□□□ -2.04
SMKR1H3BMG3 AL590639.1-201ENST00000456484 337 ntBASIC2.29□□□□□ -2.04
SMKR1H3BMG3 MTND1P16-201ENST00000465177 898 ntBASIC2.29□□□□□ -2.04
SMKR1H3BMG3 HSPD1P15-201ENST00000505573 1122 ntBASIC2.29□□□□□ -2.04
SMKR1H3BMG3 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC2.29□□□□□ -2.04
SMKR1H3BMG3 AC079395.1-201ENST00000510981 262 ntBASIC2.29□□□□□ -2.04
SMKR1H3BMG3 AC112206.4-201ENST00000515142 405 ntBASIC2.29□□□□□ -2.04
SMKR1H3BMG3 RN7SKP21-201ENST00000516503 220 ntBASIC2.29□□□□□ -2.04
SMKR1H3BMG3 RAB9BP1-201ENST00000519581 626 ntBASIC2.29□□□□□ -2.04
SMKR1H3BMG3 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC2.29□□□□□ -2.04
SMKR1H3BMG3 RGS5-218ENST00000526176 574 ntTSL 4 BASIC2.29□□□□□ -2.04
SMKR1H3BMG3 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC2.29□□□□□ -2.04
SMKR1H3BMG3 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC2.29□□□□□ -2.04
SMKR1H3BMG3 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC2.29□□□□□ -2.04
SMKR1H3BMG3 AC005951.2-201ENST00000576282 495 ntBASIC2.29□□□□□ -2.04
SMKR1H3BMG3 MIR4286-201ENST00000580651 93 ntBASIC2.29□□□□□ -2.04
SMKR1H3BMG3 AC083760.1-201ENST00000589621 670 ntBASIC2.29□□□□□ -2.04
SMKR1H3BMG3 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC2.29□□□□□ -2.04
SMKR1H3BMG3 AC012119.1-201ENST00000603184 222 ntBASIC2.29□□□□□ -2.04
SMKR1H3BMG3 DUXAP3-201ENST00000603616 594 ntBASIC2.29□□□□□ -2.04
SMKR1H3BMG3 AC090912.3-201ENST00000609775 533 ntBASIC2.29□□□□□ -2.04
SMKR1H3BMG3 MIR7851-201ENST00000610611 160 ntBASIC2.29□□□□□ -2.04
SMKR1H3BMG3 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
SMKR1H3BMG3 AC109809.1-201ENST00000619665 545 ntBASIC2.29□□□□□ -2.04
SMKR1H3BMG3 AL049777.1-201ENST00000622740 518 ntBASIC2.29□□□□□ -2.04
SMKR1H3BMG3 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC2.29□□□□□ -2.04
SMKR1H3BMG3 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.29□□□□□ -2.04
SMKR1H3BMG3 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.29□□□□□ -2.04
SMKR1H3BMG3 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
SMKR1H3BMG3 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC2.29□□□□□ -2.04
SMKR1H3BMG3 AL138713.1-201ENST00000624026 2130 ntBASIC2.29□□□□□ -2.04
SMKR1H3BMG3 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC2.29□□□□□ -2.04
SMKR1H3BMG3 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC2.28□□□□□ -2.04
SMKR1H3BMG3 MAPK10-266ENST00000641066 6555 ntBASIC2.28□□□□□ -2.04
SMKR1H3BMG3 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC2.28□□□□□ -2.04
SMKR1H3BMG3 AC092447.10-201ENST00000620607 1652 ntBASIC2.28□□□□□ -2.04
SMKR1H3BMG3 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 167.7 ms