Protein–RNA interactions for Protein: A6NMZ7

COL6A6, Collagen alpha-6(VI) chain, humanhuman

Predictions only

Length 2,263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6A6NMZ7 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC1.71□□□□□ -2.13
COL6A6A6NMZ7 AC005296.1-201ENST00000616145 209 ntBASIC1.71□□□□□ -2.13
COL6A6A6NMZ7 XIST_intron.1-201ENST00000619444 68 ntBASIC1.71□□□□□ -2.13
COL6A6A6NMZ7 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC1.71□□□□□ -2.13
COL6A6A6NMZ7 AC084768.2-201ENST00000622736 221 ntBASIC1.71□□□□□ -2.13
COL6A6A6NMZ7 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
COL6A6A6NMZ7 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC1.71□□□□□ -2.14
COL6A6A6NMZ7 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
COL6A6A6NMZ7 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC1.71□□□□□ -2.14
COL6A6A6NMZ7 MIR6073-201ENST00000352083 89 ntBASIC1.71□□□□□ -2.14
COL6A6A6NMZ7 AL035405.1-201ENST00000400795 710 ntBASIC1.71□□□□□ -2.14
COL6A6A6NMZ7 HNRNPDP2-201ENST00000406475 478 ntBASIC1.71□□□□□ -2.14
COL6A6A6NMZ7 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC1.71□□□□□ -2.14
COL6A6A6NMZ7 AL358075.3-201ENST00000426289 226 ntBASIC1.71□□□□□ -2.14
COL6A6A6NMZ7 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC1.71□□□□□ -2.14
COL6A6A6NMZ7 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC1.71□□□□□ -2.14
COL6A6A6NMZ7 AL121594.1-201ENST00000475906 575 ntBASIC1.71□□□□□ -2.14
COL6A6A6NMZ7 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC1.71□□□□□ -2.14
COL6A6A6NMZ7 AC010627.1-201ENST00000503819 1294 ntBASIC1.71□□□□□ -2.14
COL6A6A6NMZ7 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC1.71□□□□□ -2.14
COL6A6A6NMZ7 MIR4716-201ENST00000579628 84 ntBASIC1.71□□□□□ -2.14
COL6A6A6NMZ7 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC1.71□□□□□ -2.14
COL6A6A6NMZ7 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC1.71□□□□□ -2.14
COL6A6A6NMZ7 AC012467.1-201ENST00000607740 256 ntBASIC1.71□□□□□ -2.14
COL6A6A6NMZ7 AL355816.1-201ENST00000607951 118 ntBASIC1.71□□□□□ -2.14
COL6A6A6NMZ7 AC020658.4-201ENST00000613987 684 ntBASIC1.71□□□□□ -2.14
COL6A6A6NMZ7 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC1.71□□□□□ -2.14
COL6A6A6NMZ7 AC233981.2-201ENST00000611524 1614 ntBASIC1.71□□□□□ -2.14
COL6A6A6NMZ7 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
COL6A6A6NMZ7 MTND4P23-201ENST00000447723 1363 ntBASIC1.7□□□□□ -2.14
COL6A6A6NMZ7 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
COL6A6A6NMZ7 AC011155.1-201ENST00000316512 456 ntBASIC1.7□□□□□ -2.14
COL6A6A6NMZ7 AL034374.1-201ENST00000406329 351 ntBASIC1.7□□□□□ -2.14
COL6A6A6NMZ7 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC1.7□□□□□ -2.14
COL6A6A6NMZ7 ZFAND6P1-201ENST00000434138 605 ntBASIC1.7□□□□□ -2.14
COL6A6A6NMZ7 TRIM60P8Y-201ENST00000436338 762 ntBASIC1.7□□□□□ -2.14
COL6A6A6NMZ7 AC023512.1-201ENST00000444513 499 ntBASIC1.7□□□□□ -2.14
COL6A6A6NMZ7 AC007395.1-201ENST00000451333 677 ntBASIC1.7□□□□□ -2.14
COL6A6A6NMZ7 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC1.7□□□□□ -2.14
COL6A6A6NMZ7 HMGN1P7-201ENST00000491722 313 ntBASIC1.7□□□□□ -2.14
COL6A6A6NMZ7 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC1.7□□□□□ -2.14
COL6A6A6NMZ7 SNORA31.15-201ENST00000516771 132 ntBASIC1.7□□□□□ -2.14
COL6A6A6NMZ7 RNA5SP102-201ENST00000516865 106 ntBASIC1.7□□□□□ -2.14
COL6A6A6NMZ7 AP003467.2-201ENST00000520175 319 ntBASIC1.7□□□□□ -2.14
COL6A6A6NMZ7 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC1.7□□□□□ -2.14
COL6A6A6NMZ7 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC1.7□□□□□ -2.14
COL6A6A6NMZ7 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC1.7□□□□□ -2.14
COL6A6A6NMZ7 AC067805.1-201ENST00000559344 470 ntBASIC1.7□□□□□ -2.14
COL6A6A6NMZ7 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC1.7□□□□□ -2.14
COL6A6A6NMZ7 AC007687.1-201ENST00000602704 304 ntBASIC1.7□□□□□ -2.14
COL6A6A6NMZ7 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC1.7□□□□□ -2.14
COL6A6A6NMZ7 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.7□□□□□ -2.14
COL6A6A6NMZ7 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
COL6A6A6NMZ7 DCAF13P1-201ENST00000495256 1330 ntBASIC1.7□□□□□ -2.14
COL6A6A6NMZ7 MFF-206ENST00000392059 1710 ntTSL 5 BASIC1.7□□□□□ -2.14
COL6A6A6NMZ7 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
COL6A6A6NMZ7 SNORD21-201ENST00000383953 95 ntBASIC1.7□□□□□ -2.14
COL6A6A6NMZ7 RNU6-342P-201ENST00000384521 104 ntBASIC1.7□□□□□ -2.14
COL6A6A6NMZ7 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC1.7□□□□□ -2.14
COL6A6A6NMZ7 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC1.7□□□□□ -2.14
COL6A6A6NMZ7 AC234782.4-201ENST00000417646 1048 ntBASIC1.7□□□□□ -2.14
COL6A6A6NMZ7 MTND4LP13-201ENST00000425022 298 ntBASIC1.7□□□□□ -2.14
COL6A6A6NMZ7 Z85994.2-201ENST00000434327 452 ntBASIC1.7□□□□□ -2.14
COL6A6A6NMZ7 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC1.7□□□□□ -2.14
COL6A6A6NMZ7 RSL24D1P2-201ENST00000445584 366 ntBASIC1.7□□□□□ -2.14
COL6A6A6NMZ7 CASP3P1-201ENST00000446037 609 ntBASIC1.7□□□□□ -2.14
COL6A6A6NMZ7 RPS29P12-201ENST00000460178 152 ntBASIC1.7□□□□□ -2.14
COL6A6A6NMZ7 TOMM22P6-201ENST00000465035 409 ntBASIC1.7□□□□□ -2.14
COL6A6A6NMZ7 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
COL6A6A6NMZ7 AC107393.1-201ENST00000512403 346 ntBASIC1.7□□□□□ -2.14
COL6A6A6NMZ7 RNU6-889P-201ENST00000517189 103 ntBASIC1.7□□□□□ -2.14
COL6A6A6NMZ7 AC087441.2-201ENST00000529141 262 ntBASIC1.7□□□□□ -2.14
COL6A6A6NMZ7 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC1.7□□□□□ -2.14
COL6A6A6NMZ7 AC011472.4-201ENST00000615848 491 ntBASIC1.7□□□□□ -2.14
COL6A6A6NMZ7 AC010297.1-201ENST00000623948 149 ntBASIC1.7□□□□□ -2.14
COL6A6A6NMZ7 MIR3199-2-201ENST00000636243 86 ntBASIC1.7□□□□□ -2.14
COL6A6A6NMZ7 AC092447.7-201ENST00000422212 1621 ntBASIC1.7□□□□□ -2.14
COL6A6A6NMZ7 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC1.7□□□□□ -2.14
COL6A6A6NMZ7 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
COL6A6A6NMZ7 AF127577.6-201ENST00000623352 2191 ntBASIC1.7□□□□□ -2.14
COL6A6A6NMZ7 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
COL6A6A6NMZ7 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
COL6A6A6NMZ7 RNU4-31P-201ENST00000384211 141 ntBASIC1.69□□□□□ -2.14
COL6A6A6NMZ7 ARF4P2-201ENST00000430209 526 ntBASIC1.69□□□□□ -2.14
COL6A6A6NMZ7 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC1.69□□□□□ -2.14
COL6A6A6NMZ7 HMGB1P31-201ENST00000437242 427 ntBASIC1.69□□□□□ -2.14
COL6A6A6NMZ7 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC1.69□□□□□ -2.14
COL6A6A6NMZ7 HNRNPDLP3-201ENST00000456745 380 ntBASIC1.69□□□□□ -2.14
COL6A6A6NMZ7 RPS15AP17-201ENST00000470598 390 ntBASIC1.69□□□□□ -2.14
COL6A6A6NMZ7 ATP5EP1-201ENST00000510257 156 ntBASIC1.69□□□□□ -2.14
COL6A6A6NMZ7 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC1.69□□□□□ -2.14
COL6A6A6NMZ7 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC1.69□□□□□ -2.14
COL6A6A6NMZ7 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC1.69□□□□□ -2.14
COL6A6A6NMZ7 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC1.69□□□□□ -2.14
COL6A6A6NMZ7 AC123786.2-201ENST00000603459 275 ntBASIC1.69□□□□□ -2.14
COL6A6A6NMZ7 AC005021.1-201ENST00000608730 355 ntBASIC1.69□□□□□ -2.14
COL6A6A6NMZ7 AC022709.1-201ENST00000615967 87 ntBASIC1.69□□□□□ -2.14
COL6A6A6NMZ7 Xist_exon1.1-201ENST00000618930 85 ntBASIC1.69□□□□□ -2.14
COL6A6A6NMZ7 MIR4278-201ENST00000636094 69 ntBASIC1.69□□□□□ -2.14
COL6A6A6NMZ7 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC1.69□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 79.7 ms