Protein–RNA interactions for Protein: A0A0B4J266

TRAV41, T-cell receptor alpha variable 41 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV41A0A0B4J266 SNORD39.3-201ENST00000584451 71 ntBASIC1.98□□□□□ -2.09
TRAV41A0A0B4J266 AL390838.2-201ENST00000602394 274 ntBASIC1.98□□□□□ -2.09
TRAV41A0A0B4J266 AC040174.2-201ENST00000602701 465 ntBASIC1.98□□□□□ -2.09
TRAV41A0A0B4J266 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC1.98□□□□□ -2.09
TRAV41A0A0B4J266 AC026790.2-201ENST00000606282 430 ntBASIC1.98□□□□□ -2.09
TRAV41A0A0B4J266 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC1.98□□□□□ -2.09
TRAV41A0A0B4J266 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC1.98□□□□□ -2.09
TRAV41A0A0B4J266 AL353748.2-201ENST00000622148 471 ntBASIC1.98□□□□□ -2.09
TRAV41A0A0B4J266 AC040168.1-201ENST00000623594 991 ntBASIC1.98□□□□□ -2.09
TRAV41A0A0B4J266 AC010297.1-201ENST00000623948 149 ntBASIC1.98□□□□□ -2.09
TRAV41A0A0B4J266 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC1.98□□□□□ -2.09
TRAV41A0A0B4J266 AC010680.1-201ENST00000590024 3590 ntBASIC1.98□□□□□ -2.09
TRAV41A0A0B4J266 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC1.98□□□□□ -2.09
TRAV41A0A0B4J266 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
TRAV41A0A0B4J266 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
TRAV41A0A0B4J266 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC1.97□□□□□ -2.09
TRAV41A0A0B4J266 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
TRAV41A0A0B4J266 RNU6-173P-201ENST00000364215 104 ntBASIC1.97□□□□□ -2.09
TRAV41A0A0B4J266 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC1.97□□□□□ -2.09
TRAV41A0A0B4J266 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC1.97□□□□□ -2.09
TRAV41A0A0B4J266 RPA3-203ENST00000401447 414 ntTSL 3 BASIC1.97□□□□□ -2.09
TRAV41A0A0B4J266 AC233981.1-201ENST00000423224 461 ntBASIC1.97□□□□□ -2.09
TRAV41A0A0B4J266 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC1.97□□□□□ -2.09
TRAV41A0A0B4J266 RNF2P1-201ENST00000442955 1010 ntBASIC1.97□□□□□ -2.09
TRAV41A0A0B4J266 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
TRAV41A0A0B4J266 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC1.97□□□□□ -2.09
TRAV41A0A0B4J266 RPS20P24-201ENST00000457473 361 ntBASIC1.97□□□□□ -2.09
TRAV41A0A0B4J266 PABPC1P3-201ENST00000469174 459 ntBASIC1.97□□□□□ -2.09
TRAV41A0A0B4J266 AC126389.1-201ENST00000477436 290 ntBASIC1.97□□□□□ -2.09
TRAV41A0A0B4J266 VPS26AP1-201ENST00000483197 979 ntBASIC1.97□□□□□ -2.09
TRAV41A0A0B4J266 AC011352.3-201ENST00000505162 593 ntBASIC1.97□□□□□ -2.09
TRAV41A0A0B4J266 RNU4-29P-201ENST00000515943 174 ntBASIC1.97□□□□□ -2.09
TRAV41A0A0B4J266 RNA5SP148-201ENST00000516527 94 ntBASIC1.97□□□□□ -2.09
TRAV41A0A0B4J266 UBTFL10-201ENST00000528532 562 ntBASIC1.97□□□□□ -2.09
TRAV41A0A0B4J266 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC1.97□□□□□ -2.09
TRAV41A0A0B4J266 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC1.97□□□□□ -2.09
TRAV41A0A0B4J266 AC095057.3-201ENST00000567102 1157 ntBASIC1.97□□□□□ -2.09
TRAV41A0A0B4J266 AC074051.3-201ENST00000570238 358 ntBASIC1.97□□□□□ -2.09
TRAV41A0A0B4J266 MIR3670-2-201ENST00000582974 65 ntBASIC1.97□□□□□ -2.09
TRAV41A0A0B4J266 MIR3670-1-201ENST00000584160 65 ntBASIC1.97□□□□□ -2.09
TRAV41A0A0B4J266 MIR3670-3-201ENST00000584855 65 ntBASIC1.97□□□□□ -2.09
TRAV41A0A0B4J266 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC1.97□□□□□ -2.09
TRAV41A0A0B4J266 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC1.97□□□□□ -2.09
TRAV41A0A0B4J266 AC007621.1-201ENST00000604544 437 ntBASIC1.97□□□□□ -2.09
TRAV41A0A0B4J266 MIR3670-4-201ENST00000612260 65 ntBASIC1.97□□□□□ -2.09
TRAV41A0A0B4J266 AP006248.3-201ENST00000623580 594 ntBASIC1.97□□□□□ -2.09
TRAV41A0A0B4J266 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC1.97□□□□□ -2.09
TRAV41A0A0B4J266 MFSD8-245ENST00000641743 948 ntBASIC1.97□□□□□ -2.09
TRAV41A0A0B4J266 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC1.96□□□□□ -2.1
TRAV41A0A0B4J266 ANKRD62P1-201ENST00000434304 1623 ntBASIC1.96□□□□□ -2.1
TRAV41A0A0B4J266 U3.29-201ENST00000391296 212 ntBASIC1.96□□□□□ -2.1
TRAV41A0A0B4J266 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
TRAV41A0A0B4J266 UQCRFS1P3-201ENST00000407697 385 ntBASIC1.96□□□□□ -2.1
TRAV41A0A0B4J266 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC1.96□□□□□ -2.1
TRAV41A0A0B4J266 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC1.96□□□□□ -2.1
TRAV41A0A0B4J266 RPL27AP8-201ENST00000424277 446 ntBASIC1.96□□□□□ -2.1
TRAV41A0A0B4J266 AC234781.2-201ENST00000426370 994 ntBASIC1.96□□□□□ -2.1
TRAV41A0A0B4J266 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC1.96□□□□□ -2.1
TRAV41A0A0B4J266 SUMO1P4-201ENST00000429430 302 ntBASIC1.96□□□□□ -2.1
TRAV41A0A0B4J266 RPL31P54-201ENST00000429803 370 ntBASIC1.96□□□□□ -2.1
TRAV41A0A0B4J266 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC1.96□□□□□ -2.1
TRAV41A0A0B4J266 NDUFB4P6-201ENST00000436819 366 ntBASIC1.96□□□□□ -2.1
TRAV41A0A0B4J266 AC004866.2-201ENST00000438285 481 ntBASIC1.96□□□□□ -2.1
TRAV41A0A0B4J266 AC092170.1-201ENST00000440211 356 ntBASIC1.96□□□□□ -2.1
TRAV41A0A0B4J266 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC1.96□□□□□ -2.1
TRAV41A0A0B4J266 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC1.96□□□□□ -2.1
TRAV41A0A0B4J266 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC1.96□□□□□ -2.1
TRAV41A0A0B4J266 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC1.96□□□□□ -2.1
TRAV41A0A0B4J266 RPL31P50-201ENST00000471002 296 ntBASIC1.96□□□□□ -2.1
TRAV41A0A0B4J266 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC1.96□□□□□ -2.1
TRAV41A0A0B4J266 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC1.96□□□□□ -2.1
TRAV41A0A0B4J266 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC1.96□□□□□ -2.1
TRAV41A0A0B4J266 OR5BM1P-201ENST00000512021 366 ntBASIC1.96□□□□□ -2.1
TRAV41A0A0B4J266 TBCAP3-201ENST00000512475 312 ntBASIC1.96□□□□□ -2.1
TRAV41A0A0B4J266 AC114781.4-201ENST00000513707 639 ntBASIC1.96□□□□□ -2.1
TRAV41A0A0B4J266 RNA5SP320-201ENST00000516263 124 ntBASIC1.96□□□□□ -2.1
TRAV41A0A0B4J266 AC027309.2-201ENST00000520566 192 ntBASIC1.96□□□□□ -2.1
TRAV41A0A0B4J266 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC1.96□□□□□ -2.1
TRAV41A0A0B4J266 AC234778.2-201ENST00000566241 354 ntBASIC1.96□□□□□ -2.1
TRAV41A0A0B4J266 AC107982.2-201ENST00000577360 463 ntTSL 5 BASIC1.96□□□□□ -2.1
TRAV41A0A0B4J266 AL356575.1-201ENST00000603008 283 ntBASIC1.96□□□□□ -2.1
TRAV41A0A0B4J266 AC079089.3-201ENST00000603094 673 ntBASIC1.96□□□□□ -2.1
TRAV41A0A0B4J266 AC055876.5-201ENST00000605667 259 ntBASIC1.96□□□□□ -2.1
TRAV41A0A0B4J266 AC245517.5-201ENST00000611529 162 ntBASIC1.96□□□□□ -2.1
TRAV41A0A0B4J266 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
TRAV41A0A0B4J266 AC034102.8-201ENST00000615146 484 ntBASIC1.96□□□□□ -2.1
TRAV41A0A0B4J266 SNHG22-203ENST00000617833 660 ntBASIC1.96□□□□□ -2.1
TRAV41A0A0B4J266 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC1.96□□□□□ -2.1
TRAV41A0A0B4J266 FO624990.1-201ENST00000636373 85 ntBASIC1.96□□□□□ -2.1
TRAV41A0A0B4J266 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC1.96□□□□□ -2.1
TRAV41A0A0B4J266 ZNF663P-202ENST00000641770 1131 ntBASIC1.96□□□□□ -2.1
TRAV41A0A0B4J266 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC1.96□□□□□ -2.1
TRAV41A0A0B4J266 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC1.96□□□□□ -2.1
TRAV41A0A0B4J266 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC1.96□□□□□ -2.1
TRAV41A0A0B4J266 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC1.95□□□□□ -2.1
TRAV41A0A0B4J266 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
TRAV41A0A0B4J266 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC1.95□□□□□ -2.1
TRAV41A0A0B4J266 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
TRAV41A0A0B4J266 RNA5SP393-201ENST00000363423 117 ntBASIC1.95□□□□□ -2.1
TRAV41A0A0B4J266 RNA5SP456-201ENST00000364002 114 ntBASIC1.95□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms