Protein–RNA interactions for Protein: Q9Y5H8

PCDHA3, Protocadherin alpha-3, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3Q9Y5H8 AC093838.1-201ENST00000613014 469 ntBASIC4.33□□□□□ -1.72
PCDHA3Q9Y5H8 AL773545.4-201ENST00000637262 310 ntBASIC4.33□□□□□ -1.72
PCDHA3Q9Y5H8 AL513478.4-201ENST00000641636 310 ntBASIC4.33□□□□□ -1.72
PCDHA3Q9Y5H8 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC4.33□□□□□ -1.72
PCDHA3Q9Y5H8 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
PCDHA3Q9Y5H8 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
PCDHA3Q9Y5H8 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC4.32□□□□□ -1.72
PCDHA3Q9Y5H8 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
PCDHA3Q9Y5H8 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
PCDHA3Q9Y5H8 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC4.32□□□□□ -1.72
PCDHA3Q9Y5H8 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
PCDHA3Q9Y5H8 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
PCDHA3Q9Y5H8 RNU6-1155P-201ENST00000363554 107 ntBASIC4.32□□□□□ -1.72
PCDHA3Q9Y5H8 RNA5SP513-201ENST00000364648 118 ntBASIC4.32□□□□□ -1.72
PCDHA3Q9Y5H8 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC4.32□□□□□ -1.72
PCDHA3Q9Y5H8 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC4.32□□□□□ -1.72
PCDHA3Q9Y5H8 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC4.32□□□□□ -1.72
PCDHA3Q9Y5H8 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC4.32□□□□□ -1.72
PCDHA3Q9Y5H8 AC099677.1-201ENST00000420575 175 ntBASIC4.32□□□□□ -1.72
PCDHA3Q9Y5H8 AC009480.2-201ENST00000422916 432 ntBASIC4.32□□□□□ -1.72
PCDHA3Q9Y5H8 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC4.32□□□□□ -1.72
PCDHA3Q9Y5H8 TRIM60P10Y-201ENST00000425589 751 ntBASIC4.32□□□□□ -1.72
PCDHA3Q9Y5H8 OR4K11P-201ENST00000431829 904 ntBASIC4.32□□□□□ -1.72
PCDHA3Q9Y5H8 TRIM60P8Y-201ENST00000436338 762 ntBASIC4.32□□□□□ -1.72
PCDHA3Q9Y5H8 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC4.32□□□□□ -1.72
PCDHA3Q9Y5H8 ATP6V0E1P2-201ENST00000441771 245 ntBASIC4.32□□□□□ -1.72
PCDHA3Q9Y5H8 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC4.32□□□□□ -1.72
PCDHA3Q9Y5H8 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC4.32□□□□□ -1.72
PCDHA3Q9Y5H8 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC4.32□□□□□ -1.72
PCDHA3Q9Y5H8 RPL31P58-201ENST00000469001 379 ntBASIC4.32□□□□□ -1.72
PCDHA3Q9Y5H8 RN7SL459P-201ENST00000481078 302 ntBASIC4.32□□□□□ -1.72
PCDHA3Q9Y5H8 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC4.32□□□□□ -1.72
PCDHA3Q9Y5H8 CEACAMP10-202ENST00000495431 496 ntBASIC4.32□□□□□ -1.72
PCDHA3Q9Y5H8 AC116353.2-201ENST00000505332 712 ntBASIC4.32□□□□□ -1.72
PCDHA3Q9Y5H8 AC008958.1-201ENST00000511047 682 ntBASIC4.32□□□□□ -1.72
PCDHA3Q9Y5H8 AC105914.1-201ENST00000511798 226 ntBASIC4.32□□□□□ -1.72
PCDHA3Q9Y5H8 RNU7-143P-201ENST00000516781 65 ntBASIC4.32□□□□□ -1.72
PCDHA3Q9Y5H8 HMGN1P28-201ENST00000521340 364 ntBASIC4.32□□□□□ -1.72
PCDHA3Q9Y5H8 AC011979.2-201ENST00000527568 352 ntBASIC4.32□□□□□ -1.72
PCDHA3Q9Y5H8 SMILR-201ENST00000533992 553 ntTSL 4 BASIC4.32□□□□□ -1.72
PCDHA3Q9Y5H8 AK6P1-201ENST00000540219 478 ntBASIC4.32□□□□□ -1.72
PCDHA3Q9Y5H8 AC018630.1-201ENST00000541376 925 ntBASIC4.32□□□□□ -1.72
PCDHA3Q9Y5H8 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC4.32□□□□□ -1.72
PCDHA3Q9Y5H8 AC068135.2-201ENST00000569293 1028 ntBASIC4.32□□□□□ -1.72
PCDHA3Q9Y5H8 RPL23AP87-202ENST00000573039 466 ntBASIC4.32□□□□□ -1.72
PCDHA3Q9Y5H8 MIR4715-201ENST00000584117 79 ntBASIC4.32□□□□□ -1.72
PCDHA3Q9Y5H8 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC4.32□□□□□ -1.72
PCDHA3Q9Y5H8 BNIP3P33-201ENST00000598912 569 ntBASIC4.32□□□□□ -1.72
PCDHA3Q9Y5H8 IGKV1OR2-118-201ENST00000603238 347 ntBASIC4.32□□□□□ -1.72
PCDHA3Q9Y5H8 AP001330.5-201ENST00000607176 411 ntBASIC4.32□□□□□ -1.72
PCDHA3Q9Y5H8 AC104458.1-201ENST00000608243 463 ntBASIC4.32□□□□□ -1.72
PCDHA3Q9Y5H8 AC103710.2-201ENST00000609912 942 ntBASIC4.32□□□□□ -1.72
PCDHA3Q9Y5H8 AC006338.1-201ENST00000618453 749 ntBASIC4.32□□□□□ -1.72
PCDHA3Q9Y5H8 MIR6130-201ENST00000619419 109 ntBASIC4.32□□□□□ -1.72
PCDHA3Q9Y5H8 AC005609.4-201ENST00000625071 447 ntBASIC4.32□□□□□ -1.72
PCDHA3Q9Y5H8 MIR7641-1-201ENST00000627518 61 ntBASIC4.32□□□□□ -1.72
PCDHA3Q9Y5H8 MIR1321-201ENST00000637766 79 ntBASIC4.32□□□□□ -1.72
PCDHA3Q9Y5H8 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
PCDHA3Q9Y5H8 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.32□□□□□ -1.72
PCDHA3Q9Y5H8 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
PCDHA3Q9Y5H8 AC138915.3-201ENST00000562908 1389 ntBASIC4.31□□□□□ -1.72
PCDHA3Q9Y5H8 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC4.31□□□□□ -1.72
PCDHA3Q9Y5H8 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
PCDHA3Q9Y5H8 RNU6-223P-201ENST00000362830 107 ntBASIC4.31□□□□□ -1.72
PCDHA3Q9Y5H8 RNU1-132P-201ENST00000364300 164 ntBASIC4.31□□□□□ -1.72
PCDHA3Q9Y5H8 RNU1-39P-201ENST00000383897 165 ntBASIC4.31□□□□□ -1.72
PCDHA3Q9Y5H8 Y_RNA.409-201ENST00000383990 98 ntBASIC4.31□□□□□ -1.72
PCDHA3Q9Y5H8 Y_RNA.453-201ENST00000384223 109 ntBASIC4.31□□□□□ -1.72
PCDHA3Q9Y5H8 RNU6-456P-201ENST00000384493 107 ntBASIC4.31□□□□□ -1.72
PCDHA3Q9Y5H8 RNU6-780P-201ENST00000391030 104 ntBASIC4.31□□□□□ -1.72
PCDHA3Q9Y5H8 AL603766.1-201ENST00000407763 664 ntBASIC4.31□□□□□ -1.72
PCDHA3Q9Y5H8 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC4.31□□□□□ -1.72
PCDHA3Q9Y5H8 MTATP6P18-201ENST00000417994 673 ntBASIC4.31□□□□□ -1.72
PCDHA3Q9Y5H8 AC068287.1-201ENST00000430283 295 ntBASIC4.31□□□□□ -1.72
PCDHA3Q9Y5H8 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC4.31□□□□□ -1.72
PCDHA3Q9Y5H8 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC4.31□□□□□ -1.72
PCDHA3Q9Y5H8 GPR143P-201ENST00000434155 205 ntBASIC4.31□□□□□ -1.72
PCDHA3Q9Y5H8 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC4.31□□□□□ -1.72
PCDHA3Q9Y5H8 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC4.31□□□□□ -1.72
PCDHA3Q9Y5H8 RPL23AP46-201ENST00000438548 490 ntBASIC4.31□□□□□ -1.72
PCDHA3Q9Y5H8 RPL23AP24-201ENST00000458203 385 ntBASIC4.31□□□□□ -1.72
PCDHA3Q9Y5H8 RNA5SP246-201ENST00000458909 119 ntBASIC4.31□□□□□ -1.72
PCDHA3Q9Y5H8 AL049714.1-201ENST00000466686 347 ntBASIC4.31□□□□□ -1.72
PCDHA3Q9Y5H8 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC4.31□□□□□ -1.72
PCDHA3Q9Y5H8 RN7SL481P-201ENST00000477764 299 ntBASIC4.31□□□□□ -1.72
PCDHA3Q9Y5H8 AF213884.1-201ENST00000488102 463 ntBASIC4.31□□□□□ -1.72
PCDHA3Q9Y5H8 AC135721.1-201ENST00000497954 479 ntBASIC4.31□□□□□ -1.72
PCDHA3Q9Y5H8 FAM92A1P2-202ENST00000504766 877 ntBASIC4.31□□□□□ -1.72
PCDHA3Q9Y5H8 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC4.31□□□□□ -1.72
PCDHA3Q9Y5H8 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC4.31□□□□□ -1.72
PCDHA3Q9Y5H8 PRDX4P1-201ENST00000507189 574 ntBASIC4.31□□□□□ -1.72
PCDHA3Q9Y5H8 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC4.31□□□□□ -1.72
PCDHA3Q9Y5H8 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC4.31□□□□□ -1.72
PCDHA3Q9Y5H8 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC4.31□□□□□ -1.72
PCDHA3Q9Y5H8 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC4.31□□□□□ -1.72
PCDHA3Q9Y5H8 AC090281.1-201ENST00000523019 276 ntBASIC4.31□□□□□ -1.72
PCDHA3Q9Y5H8 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC4.31□□□□□ -1.72
PCDHA3Q9Y5H8 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC4.31□□□□□ -1.72
PCDHA3Q9Y5H8 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC4.31□□□□□ -1.72
PCDHA3Q9Y5H8 AL359212.1-201ENST00000556608 614 ntBASIC4.31□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 82.8 ms