Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 TRAPPC2P9-201ENST00000434556 343 ntBASIC2.33□□□□□ -2.04
SCN11AQ9UI33 RNU1-40P-201ENST00000516816 164 ntBASIC2.33□□□□□ -2.04
SCN11AQ9UI33 RNU1-97P-201ENST00000516872 164 ntBASIC2.33□□□□□ -2.04
SCN11AQ9UI33 SMARCE1P4-201ENST00000523647 241 ntBASIC2.33□□□□□ -2.04
SCN11AQ9UI33 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC2.33□□□□□ -2.04
SCN11AQ9UI33 AC008687.2-201ENST00000597865 520 ntBASIC2.33□□□□□ -2.04
SCN11AQ9UI33 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC2.33□□□□□ -2.04
SCN11AQ9UI33 AL356280.1-201ENST00000603614 379 ntBASIC2.33□□□□□ -2.04
SCN11AQ9UI33 AC090617.7-201ENST00000623952 126 ntBASIC2.33□□□□□ -2.04
SCN11AQ9UI33 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC2.33□□□□□ -2.04
SCN11AQ9UI33 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
SCN11AQ9UI33 UBE2L2-201ENST00000254302 429 ntBASIC2.32□□□□□ -2.04
SCN11AQ9UI33 RNU1-101P-201ENST00000391171 127 ntBASIC2.32□□□□□ -2.04
SCN11AQ9UI33 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC2.32□□□□□ -2.04
SCN11AQ9UI33 GNGT1-204ENST00000430875 628 ntTSL 2 BASIC2.32□□□□□ -2.04
SCN11AQ9UI33 MTND2P2-201ENST00000434633 945 ntBASIC2.32□□□□□ -2.04
SCN11AQ9UI33 RPL23AP58-201ENST00000440453 469 ntBASIC2.32□□□□□ -2.04
SCN11AQ9UI33 CASP3P1-201ENST00000446037 609 ntBASIC2.32□□□□□ -2.04
SCN11AQ9UI33 AL109741.2-201ENST00000455561 343 ntBASIC2.32□□□□□ -2.04
SCN11AQ9UI33 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC2.32□□□□□ -2.04
SCN11AQ9UI33 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC2.32□□□□□ -2.04
SCN11AQ9UI33 AC023424.2-201ENST00000493479 777 ntBASIC2.32□□□□□ -2.04
SCN11AQ9UI33 AC011352.3-201ENST00000505162 593 ntBASIC2.32□□□□□ -2.04
SCN11AQ9UI33 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC2.32□□□□□ -2.04
SCN11AQ9UI33 AC092436.3-201ENST00000511788 257 ntBASIC2.32□□□□□ -2.04
SCN11AQ9UI33 snoZ278.1-201ENST00000517059 112 ntBASIC2.32□□□□□ -2.04
SCN11AQ9UI33 CBX3P4-201ENST00000538909 354 ntBASIC2.32□□□□□ -2.04
SCN11AQ9UI33 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC2.32□□□□□ -2.04
SCN11AQ9UI33 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC2.32□□□□□ -2.04
SCN11AQ9UI33 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC2.32□□□□□ -2.04
SCN11AQ9UI33 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC2.32□□□□□ -2.04
SCN11AQ9UI33 AC106730.3-201ENST00000624568 641 ntBASIC2.32□□□□□ -2.04
SCN11AQ9UI33 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC2.31□□□□□ -2.04
SCN11AQ9UI33 RNU2-68P-201ENST00000410878 191 ntBASIC2.31□□□□□ -2.04
SCN11AQ9UI33 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC2.31□□□□□ -2.04
SCN11AQ9UI33 AC090071.1-201ENST00000507713 644 ntBASIC2.31□□□□□ -2.04
SCN11AQ9UI33 AL163153.1-201ENST00000554223 283 ntBASIC2.31□□□□□ -2.04
SCN11AQ9UI33 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC2.31□□□□□ -2.04
SCN11AQ9UI33 MIR4474-201ENST00000579189 78 ntBASIC2.31□□□□□ -2.04
SCN11AQ9UI33 AP005136.1-201ENST00000579765 429 ntBASIC2.31□□□□□ -2.04
SCN11AQ9UI33 AC012360.2-201ENST00000609349 391 ntBASIC2.31□□□□□ -2.04
SCN11AQ9UI33 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC2.31□□□□□ -2.04
SCN11AQ9UI33 AL353748.2-201ENST00000622148 471 ntBASIC2.31□□□□□ -2.04
SCN11AQ9UI33 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
SCN11AQ9UI33 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC2.31□□□□□ -2.04
SCN11AQ9UI33 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC2.31□□□□□ -2.04
SCN11AQ9UI33 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
SCN11AQ9UI33 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.31□□□□□ -2.04
SCN11AQ9UI33 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
SCN11AQ9UI33 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.31□□□□□ -2.04
SCN11AQ9UI33 AL021407.1-201ENST00000404531 386 ntBASIC2.31□□□□□ -2.04
SCN11AQ9UI33 MIR1276-201ENST00000408707 83 ntBASIC2.31□□□□□ -2.04
SCN11AQ9UI33 USP9YP27-201ENST00000418455 438 ntBASIC2.31□□□□□ -2.04
SCN11AQ9UI33 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC2.31□□□□□ -2.04
SCN11AQ9UI33 HSPE1P20-201ENST00000538133 289 ntBASIC2.31□□□□□ -2.04
SCN11AQ9UI33 AL589935.2-201ENST00000616471 1231 ntBASIC2.31□□□□□ -2.04
SCN11AQ9UI33 AC010872.1-201ENST00000624225 675 ntBASIC2.31□□□□□ -2.04
SCN11AQ9UI33 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.3□□□□□ -2.04
SCN11AQ9UI33 RNU6-707P-201ENST00000364647 95 ntBASIC2.3□□□□□ -2.04
SCN11AQ9UI33 TOMM22P1-201ENST00000418578 312 ntBASIC2.3□□□□□ -2.04
SCN11AQ9UI33 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC2.3□□□□□ -2.04
SCN11AQ9UI33 HMGN2P20-201ENST00000437531 273 ntBASIC2.3□□□□□ -2.04
SCN11AQ9UI33 Z73417.1-201ENST00000447373 778 ntBASIC2.3□□□□□ -2.04
SCN11AQ9UI33 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC2.3□□□□□ -2.04
SCN11AQ9UI33 AK6-205ENST00000618980 483 ntTSL 2 BASIC2.3□□□□□ -2.04
SCN11AQ9UI33 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC2.3□□□□□ -2.04
SCN11AQ9UI33 RNY1P14-201ENST00000384426 108 ntBASIC2.29□□□□□ -2.04
SCN11AQ9UI33 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC2.29□□□□□ -2.04
SCN11AQ9UI33 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC2.29□□□□□ -2.04
SCN11AQ9UI33 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC2.29□□□□□ -2.04
SCN11AQ9UI33 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC2.29□□□□□ -2.04
SCN11AQ9UI33 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC2.29□□□□□ -2.04
SCN11AQ9UI33 MIR4448-201ENST00000584360 86 ntBASIC2.29□□□□□ -2.04
SCN11AQ9UI33 AC024560.3-201ENST00000608482 349 ntBASIC2.29□□□□□ -2.04
SCN11AQ9UI33 AC092159.4-201ENST00000624944 550 ntBASIC2.29□□□□□ -2.04
SCN11AQ9UI33 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC2.29□□□□□ -2.04
SCN11AQ9UI33 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
SCN11AQ9UI33 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC2.28□□□□□ -2.04
SCN11AQ9UI33 RNU6-582P-201ENST00000362989 107 ntBASIC2.28□□□□□ -2.04
SCN11AQ9UI33 RPL21P75-201ENST00000396599 483 ntBASIC2.28□□□□□ -2.04
SCN11AQ9UI33 RPL21P28-201ENST00000401418 483 ntBASIC2.28□□□□□ -2.04
SCN11AQ9UI33 AL592114.1-201ENST00000403842 483 ntBASIC2.28□□□□□ -2.04
SCN11AQ9UI33 RNU7-95P-201ENST00000459222 64 ntBASIC2.28□□□□□ -2.04
SCN11AQ9UI33 RPL21P39-201ENST00000463605 483 ntBASIC2.28□□□□□ -2.04
SCN11AQ9UI33 AC011979.1-201ENST00000472300 483 ntBASIC2.28□□□□□ -2.04
SCN11AQ9UI33 RPL21P93-201ENST00000480465 489 ntBASIC2.28□□□□□ -2.04
SCN11AQ9UI33 AC233702.1-201ENST00000482905 502 ntBASIC2.28□□□□□ -2.04
SCN11AQ9UI33 AC093591.1-201ENST00000491435 481 ntBASIC2.28□□□□□ -2.04
SCN11AQ9UI33 RPL21P16-201ENST00000495531 483 ntBASIC2.28□□□□□ -2.04
SCN11AQ9UI33 AC078918.1-201ENST00000498515 228 ntBASIC2.28□□□□□ -2.04
SCN11AQ9UI33 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.28□□□□□ -2.04
SCN11AQ9UI33 SNORA25.15-201ENST00000516487 89 ntBASIC2.28□□□□□ -2.04
SCN11AQ9UI33 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC2.28□□□□□ -2.04
SCN11AQ9UI33 SETP2-201ENST00000553886 926 ntBASIC2.28□□□□□ -2.04
SCN11AQ9UI33 AL590099.1-201ENST00000615276 138 ntBASIC2.28□□□□□ -2.04
SCN11AQ9UI33 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC2.28□□□□□ -2.04
SCN11AQ9UI33 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.28□□□□□ -2.04
SCN11AQ9UI33 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
SCN11AQ9UI33 AP000275.1-201ENST00000411943 390 ntBASIC2.28□□□□□ -2.04
SCN11AQ9UI33 XKRYP4-201ENST00000414395 483 ntBASIC2.28□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 96.3 ms