Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
COL20A1Q9P218 RNA5SP119-201ENST00000362715 117 ntBASIC4.3□□□□□ -1.72
COL20A1Q9P218 RNU6-1078P-201ENST00000364522 103 ntBASIC4.3□□□□□ -1.72
COL20A1Q9P218 RNU6-1279P-201ENST00000383917 103 ntBASIC4.3□□□□□ -1.72
COL20A1Q9P218 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
COL20A1Q9P218 C8orf59P1-201ENST00000429930 303 ntBASIC4.3□□□□□ -1.72
COL20A1Q9P218 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
COL20A1Q9P218 AL121871.1-201ENST00000443413 436 ntBASIC4.3□□□□□ -1.72
COL20A1Q9P218 MTND1P1-201ENST00000445453 368 ntBASIC4.3□□□□□ -1.72
COL20A1Q9P218 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC4.3□□□□□ -1.72
COL20A1Q9P218 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC4.3□□□□□ -1.72
COL20A1Q9P218 RPL7L1P8-201ENST00000469911 741 ntBASIC4.3□□□□□ -1.72
COL20A1Q9P218 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
COL20A1Q9P218 AC055855.1-201ENST00000489563 579 ntBASIC4.3□□□□□ -1.72
COL20A1Q9P218 AC105252.1-201ENST00000503089 286 ntBASIC4.3□□□□□ -1.72
COL20A1Q9P218 AC107401.1-201ENST00000503426 685 ntBASIC4.3□□□□□ -1.72
COL20A1Q9P218 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC4.3□□□□□ -1.72
COL20A1Q9P218 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC4.3□□□□□ -1.72
COL20A1Q9P218 RNU2-46P-201ENST00000517038 113 ntBASIC4.3□□□□□ -1.72
COL20A1Q9P218 RNU6-430P-201ENST00000517078 107 ntBASIC4.3□□□□□ -1.72
COL20A1Q9P218 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC4.3□□□□□ -1.72
COL20A1Q9P218 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC4.3□□□□□ -1.72
COL20A1Q9P218 HMGN1P28-201ENST00000521340 364 ntBASIC4.3□□□□□ -1.72
COL20A1Q9P218 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC4.3□□□□□ -1.72
COL20A1Q9P218 ZDHHC20P3-201ENST00000531576 336 ntBASIC4.3□□□□□ -1.72
COL20A1Q9P218 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC4.3□□□□□ -1.72
COL20A1Q9P218 AC123904.2-201ENST00000548059 300 ntBASIC4.3□□□□□ -1.72
COL20A1Q9P218 AC069240.1-201ENST00000548774 375 ntBASIC4.3□□□□□ -1.72
COL20A1Q9P218 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC4.3□□□□□ -1.72
COL20A1Q9P218 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC4.3□□□□□ -1.72
COL20A1Q9P218 AC099489.2-201ENST00000574976 260 ntBASIC4.3□□□□□ -1.72
COL20A1Q9P218 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC4.3□□□□□ -1.72
COL20A1Q9P218 AL022154.1-201ENST00000604698 785 ntBASIC4.3□□□□□ -1.72
COL20A1Q9P218 AC098614.4-201ENST00000607601 462 ntBASIC4.3□□□□□ -1.72
COL20A1Q9P218 AC090970.3-201ENST00000612566 866 ntBASIC4.3□□□□□ -1.72
COL20A1Q9P218 AC099654.12-201ENST00000639868 649 ntBASIC4.3□□□□□ -1.72
COL20A1Q9P218 UBE3AP2-201ENST00000429033 2259 ntBASIC4.3□□□□□ -1.72
COL20A1Q9P218 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC4.29□□□□□ -1.72
COL20A1Q9P218 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
COL20A1Q9P218 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.29□□□□□ -1.72
COL20A1Q9P218 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
COL20A1Q9P218 AC106871.1-201ENST00000568324 3102 ntBASIC4.29□□□□□ -1.72
COL20A1Q9P218 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
COL20A1Q9P218 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
COL20A1Q9P218 RNU6-712P-201ENST00000410558 100 ntBASIC4.29□□□□□ -1.72
COL20A1Q9P218 RNA5SP306-201ENST00000411087 107 ntBASIC4.29□□□□□ -1.72
COL20A1Q9P218 RPS7P15-201ENST00000415804 584 ntBASIC4.29□□□□□ -1.72
COL20A1Q9P218 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC4.29□□□□□ -1.72
COL20A1Q9P218 BEND7P1-201ENST00000422058 457 ntBASIC4.29□□□□□ -1.72
COL20A1Q9P218 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC4.29□□□□□ -1.72
COL20A1Q9P218 AL589872.1-201ENST00000426602 288 ntBASIC4.29□□□□□ -1.72
COL20A1Q9P218 AC104651.1-201ENST00000427559 735 ntBASIC4.29□□□□□ -1.72
COL20A1Q9P218 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC4.29□□□□□ -1.72
COL20A1Q9P218 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC4.29□□□□□ -1.72
COL20A1Q9P218 AC234775.1-201ENST00000454247 670 ntBASIC4.29□□□□□ -1.72
COL20A1Q9P218 AC093278.1-201ENST00000494700 600 ntBASIC4.29□□□□□ -1.72
COL20A1Q9P218 ACTR3BP4-201ENST00000503033 1244 ntBASIC4.29□□□□□ -1.72
COL20A1Q9P218 AC104619.4-201ENST00000510773 249 ntBASIC4.29□□□□□ -1.72
COL20A1Q9P218 AC026726.1-201ENST00000512859 601 ntBASIC4.29□□□□□ -1.72
COL20A1Q9P218 RNU6-1095P-201ENST00000516148 108 ntBASIC4.29□□□□□ -1.72
COL20A1Q9P218 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC4.29□□□□□ -1.72
COL20A1Q9P218 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
COL20A1Q9P218 AL391840.1-201ENST00000571144 367 ntBASIC4.29□□□□□ -1.72
COL20A1Q9P218 MIR3913-1-201ENST00000577744 102 ntBASIC4.29□□□□□ -1.72
COL20A1Q9P218 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC4.29□□□□□ -1.72
COL20A1Q9P218 AC245014.2-201ENST00000603689 287 ntBASIC4.29□□□□□ -1.72
COL20A1Q9P218 AL161729.4-201ENST00000604650 476 ntBASIC4.29□□□□□ -1.72
COL20A1Q9P218 AC246785.4-201ENST00000605374 287 ntBASIC4.29□□□□□ -1.72
COL20A1Q9P218 AL355472.4-201ENST00000610233 626 ntBASIC4.29□□□□□ -1.72
COL20A1Q9P218 AC091304.9-201ENST00000612091 226 ntBASIC4.29□□□□□ -1.72
COL20A1Q9P218 ALG13-230ENST00000623189 458 ntTSL 3 BASIC4.29□□□□□ -1.72
COL20A1Q9P218 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC4.29□□□□□ -1.72
COL20A1Q9P218 MAPK10-253ENST00000641010 4072 ntBASIC4.29□□□□□ -1.72
COL20A1Q9P218 MTND5P26-201ENST00000426018 1752 ntBASIC4.29□□□□□ -1.72
COL20A1Q9P218 AC018529.3-201ENST00000624212 2254 ntBASIC4.29□□□□□ -1.72
COL20A1Q9P218 STK31-205ENST00000433467 3085 ntTSL 2 BASIC4.29□□□□□ -1.72
COL20A1Q9P218 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
COL20A1Q9P218 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
COL20A1Q9P218 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
COL20A1Q9P218 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
COL20A1Q9P218 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC4.29□□□□□ -1.72
COL20A1Q9P218 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.72
COL20A1Q9P218 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC4.28□□□□□ -1.72
COL20A1Q9P218 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC4.28□□□□□ -1.72
COL20A1Q9P218 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.72
COL20A1Q9P218 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.28□□□□□ -1.72
COL20A1Q9P218 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC4.28□□□□□ -1.72
COL20A1Q9P218 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
COL20A1Q9P218 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC4.28□□□□□ -1.72
COL20A1Q9P218 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.28□□□□□ -1.72
COL20A1Q9P218 MIR448-201ENST00000362131 111 ntBASIC4.28□□□□□ -1.72
COL20A1Q9P218 U8.3-201ENST00000363321 132 ntBASIC4.28□□□□□ -1.72
COL20A1Q9P218 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
COL20A1Q9P218 CCNG1P1-201ENST00000406783 885 ntBASIC4.28□□□□□ -1.72
COL20A1Q9P218 AL583834.1-201ENST00000406943 343 ntBASIC4.28□□□□□ -1.72
COL20A1Q9P218 RNA5SP44-201ENST00000410446 133 ntBASIC4.28□□□□□ -1.72
COL20A1Q9P218 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC4.28□□□□□ -1.72
COL20A1Q9P218 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC4.28□□□□□ -1.72
COL20A1Q9P218 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
COL20A1Q9P218 AC099677.1-201ENST00000420575 175 ntBASIC4.28□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 96.9 ms