Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 MIR4446-201ENST00000578505 67 ntBASIC2.48□□□□□ -2.01
VAPAQ9P0L0 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC2.48□□□□□ -2.01
VAPAQ9P0L0 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC2.48□□□□□ -2.01
VAPAQ9P0L0 AC010620.2-201ENST00000600135 313 ntBASIC2.48□□□□□ -2.01
VAPAQ9P0L0 AC013444.2-201ENST00000603317 787 ntBASIC2.48□□□□□ -2.01
VAPAQ9P0L0 AL671309.1-201ENST00000603750 544 ntBASIC2.48□□□□□ -2.01
VAPAQ9P0L0 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC2.48□□□□□ -2.01
VAPAQ9P0L0 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
VAPAQ9P0L0 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC2.48□□□□□ -2.01
VAPAQ9P0L0 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.48□□□□□ -2.01
VAPAQ9P0L0 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.48□□□□□ -2.01
VAPAQ9P0L0 RNA5SP393-201ENST00000363423 117 ntBASIC2.47□□□□□ -2.01
VAPAQ9P0L0 RNU6-1180P-201ENST00000364935 107 ntBASIC2.47□□□□□ -2.01
VAPAQ9P0L0 RNU6-1197P-201ENST00000391183 107 ntBASIC2.47□□□□□ -2.01
VAPAQ9P0L0 AL035405.1-201ENST00000400795 710 ntBASIC2.47□□□□□ -2.01
VAPAQ9P0L0 AL356057.3-201ENST00000402607 340 ntBASIC2.47□□□□□ -2.01
VAPAQ9P0L0 RNU6ATAC34P-201ENST00000408879 121 ntBASIC2.47□□□□□ -2.01
VAPAQ9P0L0 RNU2-25P-201ENST00000411041 191 ntBASIC2.47□□□□□ -2.01
VAPAQ9P0L0 RNU6-575P-201ENST00000411326 105 ntBASIC2.47□□□□□ -2.01
VAPAQ9P0L0 BOLA3P4-201ENST00000418151 400 ntBASIC2.47□□□□□ -2.01
VAPAQ9P0L0 PSMA6P3-201ENST00000428242 164 ntBASIC2.47□□□□□ -2.01
VAPAQ9P0L0 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC2.47□□□□□ -2.01
VAPAQ9P0L0 AC024082.2-201ENST00000434771 238 ntBASIC2.47□□□□□ -2.01
VAPAQ9P0L0 AC011816.1-201ENST00000441346 546 ntBASIC2.47□□□□□ -2.01
VAPAQ9P0L0 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC2.47□□□□□ -2.01
VAPAQ9P0L0 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC2.47□□□□□ -2.01
VAPAQ9P0L0 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
VAPAQ9P0L0 AC091860.1-201ENST00000505723 432 ntBASIC2.47□□□□□ -2.01
VAPAQ9P0L0 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC2.47□□□□□ -2.01
VAPAQ9P0L0 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.47□□□□□ -2.01
VAPAQ9P0L0 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC2.47□□□□□ -2.01
VAPAQ9P0L0 AC079148.1-201ENST00000565944 819 ntBASIC2.47□□□□□ -2.01
VAPAQ9P0L0 LARP7P2-201ENST00000575306 125 ntBASIC2.47□□□□□ -2.01
VAPAQ9P0L0 RPL23AP78-201ENST00000599928 470 ntBASIC2.47□□□□□ -2.01
VAPAQ9P0L0 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC2.47□□□□□ -2.01
VAPAQ9P0L0 AP002906.1-201ENST00000603405 233 ntBASIC2.47□□□□□ -2.01
VAPAQ9P0L0 AC092954.1-201ENST00000609121 445 ntBASIC2.47□□□□□ -2.01
VAPAQ9P0L0 AP000254.1-201ENST00000609934 520 ntBASIC2.47□□□□□ -2.01
VAPAQ9P0L0 AL161629.2-201ENST00000615347 275 ntBASIC2.47□□□□□ -2.01
VAPAQ9P0L0 AC244100.1-202ENST00000621554 382 ntBASIC2.47□□□□□ -2.01
VAPAQ9P0L0 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
VAPAQ9P0L0 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
VAPAQ9P0L0 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC2.47□□□□□ -2.01
VAPAQ9P0L0 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.46□□□□□ -2.01
VAPAQ9P0L0 IL33-203ENST00000456383 2501 ntTSL 5 BASIC2.46□□□□□ -2.01
VAPAQ9P0L0 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC2.46□□□□□ -2.01
VAPAQ9P0L0 AC008568.2-201ENST00000623862 2313 ntBASIC2.46□□□□□ -2.02
VAPAQ9P0L0 AC087359.1-201ENST00000508335 1740 ntBASIC2.46□□□□□ -2.02
VAPAQ9P0L0 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
VAPAQ9P0L0 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
VAPAQ9P0L0 U6.112-201ENST00000384129 70 ntBASIC2.46□□□□□ -2.02
VAPAQ9P0L0 RNU2-28P-201ENST00000410457 189 ntBASIC2.46□□□□□ -2.02
VAPAQ9P0L0 AC092634.6-201ENST00000418558 192 ntBASIC2.46□□□□□ -2.02
VAPAQ9P0L0 USP9YP20-201ENST00000419224 558 ntBASIC2.46□□□□□ -2.02
VAPAQ9P0L0 MTCO3P1-205ENST00000422088 832 ntBASIC2.46□□□□□ -2.02
VAPAQ9P0L0 DEFB130D-201ENST00000426866 237 ntBASIC2.46□□□□□ -2.02
VAPAQ9P0L0 RAC1P8-201ENST00000427086 527 ntBASIC2.46□□□□□ -2.02
VAPAQ9P0L0 AL135938.1-201ENST00000443141 297 ntBASIC2.46□□□□□ -2.02
VAPAQ9P0L0 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
VAPAQ9P0L0 AC009961.3-201ENST00000449832 765 ntBASIC2.46□□□□□ -2.02
VAPAQ9P0L0 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC2.46□□□□□ -2.02
VAPAQ9P0L0 AL049714.1-201ENST00000466686 347 ntBASIC2.46□□□□□ -2.02
VAPAQ9P0L0 OR52A4P-202ENST00000481634 799 ntBASIC2.46□□□□□ -2.02
VAPAQ9P0L0 AC013828.1-201ENST00000481845 158 ntBASIC2.46□□□□□ -2.02
VAPAQ9P0L0 AC147055.4-201ENST00000504399 745 ntBASIC2.46□□□□□ -2.02
VAPAQ9P0L0 VN1R104P-201ENST00000505115 1009 ntBASIC2.46□□□□□ -2.02
VAPAQ9P0L0 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC2.46□□□□□ -2.02
VAPAQ9P0L0 RNA5SP282-201ENST00000516355 108 ntBASIC2.46□□□□□ -2.02
VAPAQ9P0L0 RNU6-362P-201ENST00000516736 90 ntBASIC2.46□□□□□ -2.02
VAPAQ9P0L0 SNORA48.10-201ENST00000516965 160 ntBASIC2.46□□□□□ -2.02
VAPAQ9P0L0 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC2.46□□□□□ -2.02
VAPAQ9P0L0 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC2.46□□□□□ -2.02
VAPAQ9P0L0 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC2.46□□□□□ -2.02
VAPAQ9P0L0 AC128657.1-201ENST00000549459 145 ntBASIC2.46□□□□□ -2.02
VAPAQ9P0L0 AC060766.3-201ENST00000591442 263 ntBASIC2.46□□□□□ -2.02
VAPAQ9P0L0 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC2.46□□□□□ -2.02
VAPAQ9P0L0 SRGNP1-201ENST00000603392 451 ntBASIC2.46□□□□□ -2.02
VAPAQ9P0L0 AL031176.1-201ENST00000604554 466 ntBASIC2.46□□□□□ -2.02
VAPAQ9P0L0 AC079791.1-201ENST00000605356 973 ntBASIC2.46□□□□□ -2.02
VAPAQ9P0L0 AC024560.3-201ENST00000608482 349 ntBASIC2.46□□□□□ -2.02
VAPAQ9P0L0 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC2.46□□□□□ -2.02
VAPAQ9P0L0 VN1R74P-201ENST00000613259 503 ntBASIC2.46□□□□□ -2.02
VAPAQ9P0L0 MIR8084-201ENST00000614105 89 ntBASIC2.46□□□□□ -2.02
VAPAQ9P0L0 AL162274.2-201ENST00000614406 332 ntBASIC2.46□□□□□ -2.02
VAPAQ9P0L0 AC140725.3-201ENST00000616193 880 ntBASIC2.46□□□□□ -2.02
VAPAQ9P0L0 AC097460.3-201ENST00000623099 442 ntBASIC2.46□□□□□ -2.02
VAPAQ9P0L0 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.46□□□□□ -2.02
VAPAQ9P0L0 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC2.45□□□□□ -2.02
VAPAQ9P0L0 DBF4P1-201ENST00000412976 1892 ntBASIC2.45□□□□□ -2.02
VAPAQ9P0L0 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
VAPAQ9P0L0 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
VAPAQ9P0L0 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
VAPAQ9P0L0 AC009812.4-201ENST00000569134 1805 ntBASIC2.45□□□□□ -2.02
VAPAQ9P0L0 OR4G11P-202ENST00000642116 1414 ntBASIC2.45□□□□□ -2.02
VAPAQ9P0L0 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
VAPAQ9P0L0 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
VAPAQ9P0L0 MIR6073-201ENST00000352083 89 ntBASIC2.45□□□□□ -2.02
VAPAQ9P0L0 RNU1-140P-201ENST00000365040 165 ntBASIC2.45□□□□□ -2.02
VAPAQ9P0L0 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
VAPAQ9P0L0 RNU6-198P-201ENST00000384258 104 ntBASIC2.45□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 89.9 ms