Protein–RNA interactions for Protein: Q9NPC8

SIX2, Homeobox protein SIX2, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX2Q9NPC8 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC3.44□□□□□ -1.86
SIX2Q9NPC8 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
SIX2Q9NPC8 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
SIX2Q9NPC8 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.44□□□□□ -1.86
SIX2Q9NPC8 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.44□□□□□ -1.86
SIX2Q9NPC8 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
SIX2Q9NPC8 Y_RNA.97-201ENST00000363094 102 ntBASIC3.44□□□□□ -1.86
SIX2Q9NPC8 U3.6-201ENST00000363622 211 ntBASIC3.44□□□□□ -1.86
SIX2Q9NPC8 SNORA62.3-201ENST00000365110 153 ntBASIC3.44□□□□□ -1.86
SIX2Q9NPC8 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC3.44□□□□□ -1.86
SIX2Q9NPC8 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC3.44□□□□□ -1.86
SIX2Q9NPC8 AL357075.1-201ENST00000404107 726 ntBASIC3.44□□□□□ -1.86
SIX2Q9NPC8 RN7SKP266-201ENST00000410232 287 ntBASIC3.44□□□□□ -1.86
SIX2Q9NPC8 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC3.44□□□□□ -1.86
SIX2Q9NPC8 AC009237.5-201ENST00000414271 501 ntBASIC3.44□□□□□ -1.86
SIX2Q9NPC8 HMGB3P23-201ENST00000414981 585 ntBASIC3.44□□□□□ -1.86
SIX2Q9NPC8 FNDC3CP-201ENST00000420795 1155 ntBASIC3.44□□□□□ -1.86
SIX2Q9NPC8 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC3.44□□□□□ -1.86
SIX2Q9NPC8 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC3.44□□□□□ -1.86
SIX2Q9NPC8 AC005300.1-201ENST00000428401 373 ntBASIC3.44□□□□□ -1.86
SIX2Q9NPC8 DLGAP5P1-201ENST00000430307 464 ntBASIC3.44□□□□□ -1.86
SIX2Q9NPC8 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC3.44□□□□□ -1.86
SIX2Q9NPC8 AL353705.1-201ENST00000433468 480 ntBASIC3.44□□□□□ -1.86
SIX2Q9NPC8 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC3.44□□□□□ -1.86
SIX2Q9NPC8 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.44□□□□□ -1.86
SIX2Q9NPC8 LSM1P1-201ENST00000438629 273 ntBASIC3.44□□□□□ -1.86
SIX2Q9NPC8 RPS12P18-201ENST00000442381 270 ntBASIC3.44□□□□□ -1.86
SIX2Q9NPC8 COX6CP12-201ENST00000446748 202 ntBASIC3.44□□□□□ -1.86
SIX2Q9NPC8 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC3.44□□□□□ -1.86
SIX2Q9NPC8 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC3.44□□□□□ -1.86
SIX2Q9NPC8 RNU6-956P-201ENST00000458868 103 ntBASIC3.44□□□□□ -1.86
SIX2Q9NPC8 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC3.44□□□□□ -1.86
SIX2Q9NPC8 ACTR3BP4-201ENST00000503033 1244 ntBASIC3.44□□□□□ -1.86
SIX2Q9NPC8 LAMTOR3P2-201ENST00000504479 232 ntBASIC3.44□□□□□ -1.86
SIX2Q9NPC8 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC3.44□□□□□ -1.86
SIX2Q9NPC8 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC3.44□□□□□ -1.86
SIX2Q9NPC8 CBX3P3-201ENST00000508108 532 ntBASIC3.44□□□□□ -1.86
SIX2Q9NPC8 RNU4ATAC10P-201ENST00000516967 122 ntBASIC3.44□□□□□ -1.86
SIX2Q9NPC8 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC3.44□□□□□ -1.86
SIX2Q9NPC8 AC068657.1-201ENST00000520807 306 ntBASIC3.44□□□□□ -1.86
SIX2Q9NPC8 COX6CP8-201ENST00000522620 226 ntBASIC3.44□□□□□ -1.86
SIX2Q9NPC8 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
SIX2Q9NPC8 AL161713.1-201ENST00000555538 145 ntBASIC3.44□□□□□ -1.86
SIX2Q9NPC8 AC091489.2-201ENST00000566263 604 ntBASIC3.44□□□□□ -1.86
SIX2Q9NPC8 ABBA01006766.1-201ENST00000584728 294 ntBASIC3.44□□□□□ -1.86
SIX2Q9NPC8 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC3.44□□□□□ -1.86
SIX2Q9NPC8 AC012065.4-201ENST00000602445 679 ntBASIC3.44□□□□□ -1.86
SIX2Q9NPC8 AC068790.2-201ENST00000602601 557 ntBASIC3.44□□□□□ -1.86
SIX2Q9NPC8 AP000403.1-201ENST00000603349 851 ntBASIC3.44□□□□□ -1.86
SIX2Q9NPC8 AC068276.1-201ENST00000605793 379 ntBASIC3.44□□□□□ -1.86
SIX2Q9NPC8 AL513477.2-201ENST00000607858 568 ntBASIC3.44□□□□□ -1.86
SIX2Q9NPC8 AC103591.3-201ENST00000608684 209 ntBASIC3.44□□□□□ -1.86
SIX2Q9NPC8 AL357080.1-201ENST00000617394 239 ntBASIC3.44□□□□□ -1.86
SIX2Q9NPC8 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC3.44□□□□□ -1.86
SIX2Q9NPC8 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC3.44□□□□□ -1.86
SIX2Q9NPC8 AC025048.6-202ENST00000627667 438 ntBASIC3.44□□□□□ -1.86
SIX2Q9NPC8 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC3.44□□□□□ -1.86
SIX2Q9NPC8 MIR7153-201ENST00000637758 57 ntBASIC3.44□□□□□ -1.86
SIX2Q9NPC8 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC3.44□□□□□ -1.86
SIX2Q9NPC8 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.44□□□□□ -1.86
SIX2Q9NPC8 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
SIX2Q9NPC8 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC3.44□□□□□ -1.86
SIX2Q9NPC8 MTND4P4-201ENST00000439033 1366 ntBASIC3.43□□□□□ -1.86
SIX2Q9NPC8 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.43□□□□□ -1.86
SIX2Q9NPC8 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
SIX2Q9NPC8 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
SIX2Q9NPC8 MIR148B-201ENST00000362252 99 ntBASIC3.43□□□□□ -1.86
SIX2Q9NPC8 RNU5F-6P-201ENST00000362979 116 ntBASIC3.43□□□□□ -1.86
SIX2Q9NPC8 RNU6-289P-201ENST00000364093 107 ntBASIC3.43□□□□□ -1.86
SIX2Q9NPC8 RNU6-343P-201ENST00000364709 104 ntBASIC3.43□□□□□ -1.86
SIX2Q9NPC8 RNU4-91P-201ENST00000364778 135 ntBASIC3.43□□□□□ -1.86
SIX2Q9NPC8 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
SIX2Q9NPC8 RNU6-730P-201ENST00000383954 104 ntBASIC3.43□□□□□ -1.86
SIX2Q9NPC8 MIR200C-201ENST00000384980 68 ntBASIC3.43□□□□□ -1.86
SIX2Q9NPC8 RPL31P1-201ENST00000398116 372 ntBASIC3.43□□□□□ -1.86
SIX2Q9NPC8 AL031679.1-201ENST00000400616 525 ntBASIC3.43□□□□□ -1.86
SIX2Q9NPC8 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC3.43□□□□□ -1.86
SIX2Q9NPC8 AC109780.2-201ENST00000413467 845 ntBASIC3.43□□□□□ -1.86
SIX2Q9NPC8 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC3.43□□□□□ -1.86
SIX2Q9NPC8 OR1AA1P-201ENST00000419597 916 ntBASIC3.43□□□□□ -1.86
SIX2Q9NPC8 AC069157.1-201ENST00000421749 137 ntBASIC3.43□□□□□ -1.86
SIX2Q9NPC8 MTCO2P34-201ENST00000421994 607 ntBASIC3.43□□□□□ -1.86
SIX2Q9NPC8 RPS27AP14-201ENST00000422868 454 ntBASIC3.43□□□□□ -1.86
SIX2Q9NPC8 TRAPPC2P9-201ENST00000434556 343 ntBASIC3.43□□□□□ -1.86
SIX2Q9NPC8 Z95327.1-201ENST00000446082 482 ntBASIC3.43□□□□□ -1.86
SIX2Q9NPC8 ST13P20-201ENST00000447996 1065 ntBASIC3.43□□□□□ -1.86
SIX2Q9NPC8 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.43□□□□□ -1.86
SIX2Q9NPC8 RPL7P31-201ENST00000450192 724 ntBASIC3.43□□□□□ -1.86
SIX2Q9NPC8 BX322784.1-201ENST00000455793 1077 ntBASIC3.43□□□□□ -1.86
SIX2Q9NPC8 AC091153.1-201ENST00000466297 402 ntBASIC3.43□□□□□ -1.86
SIX2Q9NPC8 ST13P14-201ENST00000474095 734 ntBASIC3.43□□□□□ -1.86
SIX2Q9NPC8 AC017015.1-201ENST00000477387 286 ntBASIC3.43□□□□□ -1.86
SIX2Q9NPC8 FAM172BP-201ENST00000487497 1089 ntBASIC3.43□□□□□ -1.86
SIX2Q9NPC8 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC3.43□□□□□ -1.86
SIX2Q9NPC8 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC3.43□□□□□ -1.86
SIX2Q9NPC8 AC114967.1-201ENST00000504890 259 ntBASIC3.43□□□□□ -1.86
SIX2Q9NPC8 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC3.43□□□□□ -1.86
SIX2Q9NPC8 POU5F1P7-201ENST00000508759 541 ntBASIC3.43□□□□□ -1.86
SIX2Q9NPC8 IGHV3-32-201ENST00000519182 355 ntBASIC3.43□□□□□ -1.86
SIX2Q9NPC8 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC3.43□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 91.4 ms