Protein–RNA interactions for Protein: Q9H4P4

RNF41, E3 ubiquitin-protein ligase NRDP1, humanhuman

Predicted RBP Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41Q9H4P4 CR769776.1-201ENST00000441254 787 ntBASIC3.27□□□□□ -1.89
RNF41Q9H4P4 AL831737.1-201ENST00000441288 271 ntBASIC3.27□□□□□ -1.89
RNF41Q9H4P4 SLC31A1P1-201ENST00000451221 567 ntBASIC3.27□□□□□ -1.89
RNF41Q9H4P4 TRGVB-201ENST00000453257 471 ntBASIC3.27□□□□□ -1.89
RNF41Q9H4P4 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC3.27□□□□□ -1.89
RNF41Q9H4P4 snoU13.3-201ENST00000459441 104 ntBASIC3.27□□□□□ -1.89
RNF41Q9H4P4 SNORD11.1-201ENST00000459482 85 ntBASIC3.27□□□□□ -1.89
RNF41Q9H4P4 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC3.27□□□□□ -1.89
RNF41Q9H4P4 AC108860.1-201ENST00000484521 383 ntBASIC3.27□□□□□ -1.89
RNF41Q9H4P4 AC096576.1-201ENST00000489014 359 ntBASIC3.27□□□□□ -1.89
RNF41Q9H4P4 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC3.27□□□□□ -1.89
RNF41Q9H4P4 RNU6-311P-201ENST00000516224 102 ntBASIC3.27□□□□□ -1.89
RNF41Q9H4P4 OR6C73P-201ENST00000546432 358 ntBASIC3.27□□□□□ -1.89
RNF41Q9H4P4 MTND1P24-201ENST00000552175 861 ntBASIC3.27□□□□□ -1.89
RNF41Q9H4P4 AC090695.1-201ENST00000561269 1222 ntBASIC3.27□□□□□ -1.89
RNF41Q9H4P4 AC138761.3-201ENST00000579993 334 ntBASIC3.27□□□□□ -1.89
RNF41Q9H4P4 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC3.27□□□□□ -1.89
RNF41Q9H4P4 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC3.27□□□□□ -1.89
RNF41Q9H4P4 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC3.27□□□□□ -1.89
RNF41Q9H4P4 AC091057.2-201ENST00000602594 792 ntBASIC3.27□□□□□ -1.89
RNF41Q9H4P4 DUXAP3-201ENST00000603616 594 ntBASIC3.27□□□□□ -1.89
RNF41Q9H4P4 AC025588.3-201ENST00000604182 274 ntBASIC3.27□□□□□ -1.89
RNF41Q9H4P4 AL033523.1-201ENST00000605153 153 ntBASIC3.27□□□□□ -1.89
RNF41Q9H4P4 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC3.27□□□□□ -1.89
RNF41Q9H4P4 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
RNF41Q9H4P4 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC3.27□□□□□ -1.89
RNF41Q9H4P4 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
RNF41Q9H4P4 ZNF734P-201ENST00000419494 1534 ntBASIC3.27□□□□□ -1.89
RNF41Q9H4P4 FAM35BP-202ENST00000497389 3337 ntBASIC3.27□□□□□ -1.89
RNF41Q9H4P4 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
RNF41Q9H4P4 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC3.27□□□□□ -1.89
RNF41Q9H4P4 SLC10A5P1-201ENST00000379063 1306 ntBASIC3.26□□□□□ -1.89
RNF41Q9H4P4 AC008264.2-201ENST00000610193 3731 ntBASIC3.26□□□□□ -1.89
RNF41Q9H4P4 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
RNF41Q9H4P4 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
RNF41Q9H4P4 RNU6-339P-201ENST00000384310 107 ntBASIC3.26□□□□□ -1.89
RNF41Q9H4P4 MIR9-1-201ENST00000385198 89 ntBASIC3.26□□□□□ -1.89
RNF41Q9H4P4 U3.26-201ENST00000391236 204 ntBASIC3.26□□□□□ -1.89
RNF41Q9H4P4 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC3.26□□□□□ -1.89
RNF41Q9H4P4 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC3.26□□□□□ -1.89
RNF41Q9H4P4 BMS1P22-201ENST00000414726 313 ntBASIC3.26□□□□□ -1.89
RNF41Q9H4P4 NDUFB4P5-201ENST00000415445 361 ntBASIC3.26□□□□□ -1.89
RNF41Q9H4P4 COX7BP2-201ENST00000437976 242 ntBASIC3.26□□□□□ -1.89
RNF41Q9H4P4 MTND2P20-201ENST00000440805 661 ntBASIC3.26□□□□□ -1.89
RNF41Q9H4P4 AC025750.2-201ENST00000442609 450 ntBASIC3.26□□□□□ -1.89
RNF41Q9H4P4 MTCO2P25-201ENST00000447065 681 ntBASIC3.26□□□□□ -1.89
RNF41Q9H4P4 RPL7P5-201ENST00000471472 736 ntBASIC3.26□□□□□ -1.89
RNF41Q9H4P4 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC3.26□□□□□ -1.89
RNF41Q9H4P4 AC021146.8-201ENST00000507455 733 ntBASIC3.26□□□□□ -1.89
RNF41Q9H4P4 HMGB1P28-201ENST00000507778 552 ntBASIC3.26□□□□□ -1.89
RNF41Q9H4P4 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC3.26□□□□□ -1.89
RNF41Q9H4P4 AC026801.2-201ENST00000515352 425 ntBASIC3.26□□□□□ -1.89
RNF41Q9H4P4 IGHVII-62-1-201ENST00000519283 235 ntBASIC3.26□□□□□ -1.89
RNF41Q9H4P4 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
RNF41Q9H4P4 RGS4-209ENST00000531057 544 ntTSL 4 BASIC3.26□□□□□ -1.89
RNF41Q9H4P4 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC3.26□□□□□ -1.89
RNF41Q9H4P4 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC3.26□□□□□ -1.89
RNF41Q9H4P4 MTND4P33-201ENST00000556706 766 ntBASIC3.26□□□□□ -1.89
RNF41Q9H4P4 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.26□□□□□ -1.89
RNF41Q9H4P4 AC022662.1-201ENST00000580252 331 ntBASIC3.26□□□□□ -1.89
RNF41Q9H4P4 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC3.26□□□□□ -1.89
RNF41Q9H4P4 AC006504.3-201ENST00000586818 523 ntBASIC3.26□□□□□ -1.89
RNF41Q9H4P4 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC3.26□□□□□ -1.89
RNF41Q9H4P4 AC113368.1-201ENST00000603736 382 ntBASIC3.26□□□□□ -1.89
RNF41Q9H4P4 AC107952.2-201ENST00000606048 486 ntBASIC3.26□□□□□ -1.89
RNF41Q9H4P4 AL451074.6-201ENST00000608512 729 ntBASIC3.26□□□□□ -1.89
RNF41Q9H4P4 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC3.26□□□□□ -1.89
RNF41Q9H4P4 AC092650.2-201ENST00000619984 902 ntBASIC3.26□□□□□ -1.89
RNF41Q9H4P4 AC068787.1-201ENST00000623908 691 ntBASIC3.26□□□□□ -1.89
RNF41Q9H4P4 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC3.26□□□□□ -1.89
RNF41Q9H4P4 MFF-206ENST00000392059 1710 ntTSL 5 BASIC3.26□□□□□ -1.89
RNF41Q9H4P4 AL157700.1-201ENST00000561973 1432 ntBASIC3.26□□□□□ -1.89
RNF41Q9H4P4 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
RNF41Q9H4P4 ZNF37BP-203ENST00000452306 1352 ntBASIC3.25□□□□□ -1.89
RNF41Q9H4P4 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
RNF41Q9H4P4 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
RNF41Q9H4P4 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
RNF41Q9H4P4 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
RNF41Q9H4P4 RNU6-989P-201ENST00000362756 107 ntBASIC3.25□□□□□ -1.89
RNF41Q9H4P4 RNU6-621P-201ENST00000364752 109 ntBASIC3.25□□□□□ -1.89
RNF41Q9H4P4 DYNLT3P1-201ENST00000378574 347 ntBASIC3.25□□□□□ -1.89
RNF41Q9H4P4 SNORA48.8-201ENST00000391324 134 ntBASIC3.25□□□□□ -1.89
RNF41Q9H4P4 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
RNF41Q9H4P4 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC3.25□□□□□ -1.89
RNF41Q9H4P4 AL035410.1-201ENST00000427409 427 ntBASIC3.25□□□□□ -1.89
RNF41Q9H4P4 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC3.25□□□□□ -1.89
RNF41Q9H4P4 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
RNF41Q9H4P4 VN1R10P-201ENST00000447106 875 ntBASIC3.25□□□□□ -1.89
RNF41Q9H4P4 PTENP1-201ENST00000447117 1215 ntBASIC3.25□□□□□ -1.89
RNF41Q9H4P4 NCOR1P1-202ENST00000486162 291 ntBASIC3.25□□□□□ -1.89
RNF41Q9H4P4 RN7SL283P-201ENST00000489055 303 ntBASIC3.25□□□□□ -1.89
RNF41Q9H4P4 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
RNF41Q9H4P4 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC3.25□□□□□ -1.89
RNF41Q9H4P4 AC118282.1-201ENST00000506408 765 ntBASIC3.25□□□□□ -1.89
RNF41Q9H4P4 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC3.25□□□□□ -1.89
RNF41Q9H4P4 AC079395.1-201ENST00000510981 262 ntBASIC3.25□□□□□ -1.89
RNF41Q9H4P4 RN7SKP265-201ENST00000516448 223 ntBASIC3.25□□□□□ -1.89
RNF41Q9H4P4 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC3.25□□□□□ -1.89
RNF41Q9H4P4 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC3.25□□□□□ -1.89
RNF41Q9H4P4 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC3.25□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 111 ms