Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
SNX18Q96RF0 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
SNX18Q96RF0 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
SNX18Q96RF0 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC3.99□□□□□ -1.77
SNX18Q96RF0 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC3.99□□□□□ -1.77
SNX18Q96RF0 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
SNX18Q96RF0 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.98□□□□□ -1.77
SNX18Q96RF0 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
SNX18Q96RF0 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
SNX18Q96RF0 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
SNX18Q96RF0 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
SNX18Q96RF0 DHX40P1-201ENST00000588725 1412 ntBASIC3.98□□□□□ -1.77
SNX18Q96RF0 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC3.98□□□□□ -1.77
SNX18Q96RF0 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC3.98□□□□□ -1.77
SNX18Q96RF0 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC3.98□□□□□ -1.77
SNX18Q96RF0 AC126755.2-208ENST00000327792 462 ntBASIC3.98□□□□□ -1.77
SNX18Q96RF0 AC138969.1-213ENST00000331436 462 ntBASIC3.98□□□□□ -1.77
SNX18Q96RF0 RNA5SP388-201ENST00000362584 119 ntBASIC3.98□□□□□ -1.77
SNX18Q96RF0 Y_RNA.160-201ENST00000363677 92 ntBASIC3.98□□□□□ -1.77
SNX18Q96RF0 RNY1P12-201ENST00000364251 105 ntBASIC3.98□□□□□ -1.77
SNX18Q96RF0 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
SNX18Q96RF0 RNU1-39P-201ENST00000383897 165 ntBASIC3.98□□□□□ -1.77
SNX18Q96RF0 MIR153-1-201ENST00000384914 90 ntBASIC3.98□□□□□ -1.77
SNX18Q96RF0 MAP1LC3BP1-201ENST00000417653 379 ntBASIC3.98□□□□□ -1.77
SNX18Q96RF0 ZNF90P2-204ENST00000419323 1075 ntBASIC3.98□□□□□ -1.77
SNX18Q96RF0 LAMTOR3P1-201ENST00000428620 370 ntBASIC3.98□□□□□ -1.77
SNX18Q96RF0 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC3.98□□□□□ -1.77
SNX18Q96RF0 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
SNX18Q96RF0 RPL23AP30-201ENST00000432419 501 ntBASIC3.98□□□□□ -1.77
SNX18Q96RF0 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC3.98□□□□□ -1.77
SNX18Q96RF0 ATP6V0E1P2-201ENST00000441771 245 ntBASIC3.98□□□□□ -1.77
SNX18Q96RF0 AL162591.2-201ENST00000449634 317 ntBASIC3.98□□□□□ -1.77
SNX18Q96RF0 FDX1P2-201ENST00000450769 375 ntBASIC3.98□□□□□ -1.77
SNX18Q96RF0 SNORD121B-201ENST00000458838 81 ntBASIC3.98□□□□□ -1.77
SNX18Q96RF0 ST13P14-201ENST00000474095 734 ntBASIC3.98□□□□□ -1.77
SNX18Q96RF0 AL139099.1-201ENST00000497398 403 ntBASIC3.98□□□□□ -1.77
SNX18Q96RF0 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC3.98□□□□□ -1.77
SNX18Q96RF0 AC018710.1-201ENST00000506509 158 ntBASIC3.98□□□□□ -1.77
SNX18Q96RF0 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC3.98□□□□□ -1.77
SNX18Q96RF0 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC3.98□□□□□ -1.77
SNX18Q96RF0 RNA5SP337-201ENST00000517007 109 ntBASIC3.98□□□□□ -1.77
SNX18Q96RF0 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
SNX18Q96RF0 AP003385.6-201ENST00000531603 374 ntBASIC3.98□□□□□ -1.77
SNX18Q96RF0 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC3.98□□□□□ -1.77
SNX18Q96RF0 AC007424.1-203ENST00000554613 687 ntBASIC3.98□□□□□ -1.77
SNX18Q96RF0 AC034105.3-201ENST00000565294 442 ntBASIC3.98□□□□□ -1.77
SNX18Q96RF0 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC3.98□□□□□ -1.77
SNX18Q96RF0 MIR4715-201ENST00000584117 79 ntBASIC3.98□□□□□ -1.77
SNX18Q96RF0 AC244505.7-201ENST00000599675 272 ntBASIC3.98□□□□□ -1.77
SNX18Q96RF0 AC025449.1-201ENST00000603896 529 ntBASIC3.98□□□□□ -1.77
SNX18Q96RF0 TEX41-238ENST00000604253 709 ntTSL 5 BASIC3.98□□□□□ -1.77
SNX18Q96RF0 AC012603.1-201ENST00000606424 528 ntBASIC3.98□□□□□ -1.77
SNX18Q96RF0 MIR6891-201ENST00000618788 93 ntBASIC3.98□□□□□ -1.77
SNX18Q96RF0 AC002550.2-201ENST00000621246 394 ntBASIC3.98□□□□□ -1.77
SNX18Q96RF0 AL356585.4-201ENST00000623078 1229 ntBASIC3.98□□□□□ -1.77
SNX18Q96RF0 AC009161.2-201ENST00000624626 138 ntBASIC3.98□□□□□ -1.77
SNX18Q96RF0 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC3.98□□□□□ -1.77
SNX18Q96RF0 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
SNX18Q96RF0 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
SNX18Q96RF0 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC3.98□□□□□ -1.77
SNX18Q96RF0 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC3.98□□□□□ -1.77
SNX18Q96RF0 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
SNX18Q96RF0 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
SNX18Q96RF0 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.97□□□□□ -1.77
SNX18Q96RF0 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
SNX18Q96RF0 AL049555.1-201ENST00000562834 1933 ntBASIC3.97□□□□□ -1.77
SNX18Q96RF0 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
SNX18Q96RF0 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
SNX18Q96RF0 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC3.97□□□□□ -1.77
SNX18Q96RF0 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
SNX18Q96RF0 RNU6-1322P-201ENST00000364309 107 ntBASIC3.97□□□□□ -1.77
SNX18Q96RF0 SNORA70F-201ENST00000384142 135 ntBASIC3.97□□□□□ -1.77
SNX18Q96RF0 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
SNX18Q96RF0 RNU6-821P-201ENST00000390995 107 ntBASIC3.97□□□□□ -1.77
SNX18Q96RF0 AL356776.1-201ENST00000406574 447 ntBASIC3.97□□□□□ -1.77
SNX18Q96RF0 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC3.97□□□□□ -1.77
SNX18Q96RF0 AC012498.1-201ENST00000424037 437 ntBASIC3.97□□□□□ -1.77
SNX18Q96RF0 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC3.97□□□□□ -1.77
SNX18Q96RF0 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC3.97□□□□□ -1.77
SNX18Q96RF0 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC3.97□□□□□ -1.77
SNX18Q96RF0 GTF2IP20-201ENST00000431663 360 ntBASIC3.97□□□□□ -1.77
SNX18Q96RF0 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
SNX18Q96RF0 FTH1P1-201ENST00000437933 532 ntBASIC3.97□□□□□ -1.77
SNX18Q96RF0 RPS15AP9-201ENST00000439856 381 ntBASIC3.97□□□□□ -1.77
SNX18Q96RF0 RPL23AP93-201ENST00000440847 484 ntBASIC3.97□□□□□ -1.77
SNX18Q96RF0 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC3.97□□□□□ -1.77
SNX18Q96RF0 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC3.97□□□□□ -1.77
SNX18Q96RF0 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC3.97□□□□□ -1.77
SNX18Q96RF0 RPL36AP51-201ENST00000487216 318 ntBASIC3.97□□□□□ -1.77
SNX18Q96RF0 AC091951.2-201ENST00000500762 203 ntBASIC3.97□□□□□ -1.77
SNX18Q96RF0 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC3.97□□□□□ -1.77
SNX18Q96RF0 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC3.97□□□□□ -1.77
SNX18Q96RF0 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC3.97□□□□□ -1.77
SNX18Q96RF0 IGKV2D-23-201ENST00000518179 286 ntBASIC3.97□□□□□ -1.77
SNX18Q96RF0 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC3.97□□□□□ -1.77
SNX18Q96RF0 PHBP17-201ENST00000528576 541 ntBASIC3.97□□□□□ -1.77
SNX18Q96RF0 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC3.97□□□□□ -1.77
SNX18Q96RF0 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC3.97□□□□□ -1.77
SNX18Q96RF0 SETP7-201ENST00000552169 453 ntBASIC3.97□□□□□ -1.77
SNX18Q96RF0 HIF1AP1-201ENST00000553642 175 ntBASIC3.97□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 108.9 ms