Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC6.17□□□□□ -1.42
TRIM47Q96LD4 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC6.17□□□□□ -1.42
TRIM47Q96LD4 AC008687.2-201ENST00000597865 520 ntBASIC6.17□□□□□ -1.42
TRIM47Q96LD4 AL512782.1-201ENST00000603093 364 ntBASIC6.17□□□□□ -1.42
TRIM47Q96LD4 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC6.17□□□□□ -1.42
TRIM47Q96LD4 MIR7703-201ENST00000620784 77 ntBASIC6.17□□□□□ -1.42
TRIM47Q96LD4 U6.101-201ENST00000637707 76 ntBASIC6.17□□□□□ -1.42
TRIM47Q96LD4 WAC-209ENST00000428935 1320 ntTSL 2 BASIC6.17□□□□□ -1.42
TRIM47Q96LD4 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC6.17□□□□□ -1.42
TRIM47Q96LD4 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
TRIM47Q96LD4 AC002525.1-201ENST00000624392 1622 ntBASIC6.17□□□□□ -1.42
TRIM47Q96LD4 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
TRIM47Q96LD4 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
TRIM47Q96LD4 THAP12P4-201ENST00000528321 2266 ntBASIC6.16□□□□□ -1.42
TRIM47Q96LD4 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC6.16□□□□□ -1.42
TRIM47Q96LD4 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC6.16□□□□□ -1.42
TRIM47Q96LD4 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
TRIM47Q96LD4 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC6.16□□□□□ -1.42
TRIM47Q96LD4 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC6.16□□□□□ -1.42
TRIM47Q96LD4 AC003973.3-201ENST00000624863 2822 ntBASIC6.16□□□□□ -1.42
TRIM47Q96LD4 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
TRIM47Q96LD4 AC126755.2-208ENST00000327792 462 ntBASIC6.16□□□□□ -1.42
TRIM47Q96LD4 AC138969.1-213ENST00000331436 462 ntBASIC6.16□□□□□ -1.42
TRIM47Q96LD4 Y_RNA.183-201ENST00000363882 113 ntBASIC6.16□□□□□ -1.42
TRIM47Q96LD4 SNORA62.2-201ENST00000364672 152 ntBASIC6.16□□□□□ -1.42
TRIM47Q96LD4 CDC123-202ENST00000378900 933 ntTSL 5 BASIC6.16□□□□□ -1.42
TRIM47Q96LD4 RNU6-842P-201ENST00000384269 107 ntBASIC6.16□□□□□ -1.42
TRIM47Q96LD4 RNU6-611P-201ENST00000384276 104 ntBASIC6.16□□□□□ -1.42
TRIM47Q96LD4 Y_RNA.471-201ENST00000384312 102 ntBASIC6.16□□□□□ -1.42
TRIM47Q96LD4 MIR215-201ENST00000384858 110 ntBASIC6.16□□□□□ -1.42
TRIM47Q96LD4 RNA5SP105-201ENST00000391123 113 ntBASIC6.16□□□□□ -1.42
TRIM47Q96LD4 AC140479.3-201ENST00000418944 1126 ntBASIC6.16□□□□□ -1.42
TRIM47Q96LD4 AC073465.2-201ENST00000440938 498 ntBASIC6.16□□□□□ -1.42
TRIM47Q96LD4 AC114495.1-201ENST00000441274 436 ntBASIC6.16□□□□□ -1.42
TRIM47Q96LD4 NOTCH2P1-201ENST00000443481 624 ntBASIC6.16□□□□□ -1.42
TRIM47Q96LD4 RPL36AP15-201ENST00000444514 266 ntBASIC6.16□□□□□ -1.42
TRIM47Q96LD4 RN7SL188P-201ENST00000469842 285 ntBASIC6.16□□□□□ -1.42
TRIM47Q96LD4 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC6.16□□□□□ -1.42
TRIM47Q96LD4 SERF1AP1-201ENST00000514575 187 ntBASIC6.16□□□□□ -1.42
TRIM47Q96LD4 AF186190.1-201ENST00000517470 480 ntBASIC6.16□□□□□ -1.42
TRIM47Q96LD4 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC6.16□□□□□ -1.42
TRIM47Q96LD4 AC011979.2-201ENST00000527568 352 ntBASIC6.16□□□□□ -1.42
TRIM47Q96LD4 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC6.16□□□□□ -1.42
TRIM47Q96LD4 AC005341.1-201ENST00000571086 708 ntBASIC6.16□□□□□ -1.42
TRIM47Q96LD4 FAM106CP-201ENST00000582212 507 ntBASIC6.16□□□□□ -1.42
TRIM47Q96LD4 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC6.16□□□□□ -1.42
TRIM47Q96LD4 AL161423.1-201ENST00000613700 262 ntBASIC6.16□□□□□ -1.42
TRIM47Q96LD4 AP001486.3-201ENST00000615334 372 ntBASIC6.16□□□□□ -1.42
TRIM47Q96LD4 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC6.16□□□□□ -1.42
TRIM47Q96LD4 OR9K1P-202ENST00000641111 3217 ntBASIC6.16□□□□□ -1.42
TRIM47Q96LD4 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
TRIM47Q96LD4 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
TRIM47Q96LD4 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC6.16□□□□□ -1.42
TRIM47Q96LD4 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
TRIM47Q96LD4 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
TRIM47Q96LD4 AC006206.1-201ENST00000544842 3387 ntBASIC6.16□□□□□ -1.42
TRIM47Q96LD4 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
TRIM47Q96LD4 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
TRIM47Q96LD4 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
TRIM47Q96LD4 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
TRIM47Q96LD4 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
TRIM47Q96LD4 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
TRIM47Q96LD4 MFSD8-216ENST00000641147 4009 ntBASIC6.15□□□□□ -1.42
TRIM47Q96LD4 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
TRIM47Q96LD4 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC6.15□□□□□ -1.42
TRIM47Q96LD4 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC6.15□□□□□ -1.42
TRIM47Q96LD4 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.42
TRIM47Q96LD4 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.42
TRIM47Q96LD4 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC6.15□□□□□ -1.42
TRIM47Q96LD4 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
TRIM47Q96LD4 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
TRIM47Q96LD4 GNAS-202ENST00000306090 477 ntTSL 5 BASIC6.15□□□□□ -1.42
TRIM47Q96LD4 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
TRIM47Q96LD4 RNU6-179P-201ENST00000363350 107 ntBASIC6.15□□□□□ -1.42
TRIM47Q96LD4 RNU6-1151P-201ENST00000384684 107 ntBASIC6.15□□□□□ -1.42
TRIM47Q96LD4 AL078599.1-201ENST00000402075 293 ntBASIC6.15□□□□□ -1.42
TRIM47Q96LD4 RNU6-1156P-201ENST00000410365 100 ntBASIC6.15□□□□□ -1.42
TRIM47Q96LD4 RN7SKP51-201ENST00000410781 304 ntBASIC6.15□□□□□ -1.42
TRIM47Q96LD4 RNU4-78P-201ENST00000410940 126 ntBASIC6.15□□□□□ -1.42
TRIM47Q96LD4 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC6.15□□□□□ -1.42
TRIM47Q96LD4 OR2AM1P-201ENST00000422137 422 ntBASIC6.15□□□□□ -1.42
TRIM47Q96LD4 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC6.15□□□□□ -1.42
TRIM47Q96LD4 RPL23AP25-201ENST00000430973 463 ntBASIC6.15□□□□□ -1.42
TRIM47Q96LD4 AL445305.1-201ENST00000432577 575 ntBASIC6.15□□□□□ -1.42
TRIM47Q96LD4 NDUFB4P8-201ENST00000435351 367 ntBASIC6.15□□□□□ -1.42
TRIM47Q96LD4 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC6.15□□□□□ -1.42
TRIM47Q96LD4 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC6.15□□□□□ -1.42
TRIM47Q96LD4 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC6.15□□□□□ -1.42
TRIM47Q96LD4 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC6.15□□□□□ -1.42
TRIM47Q96LD4 RPS27AP18-201ENST00000515536 459 ntBASIC6.15□□□□□ -1.42
TRIM47Q96LD4 Y_RNA.662-201ENST00000516028 97 ntBASIC6.15□□□□□ -1.42
TRIM47Q96LD4 RNU6-919P-201ENST00000516731 104 ntBASIC6.15□□□□□ -1.42
TRIM47Q96LD4 IGHVII-44-2-201ENST00000517728 250 ntBASIC6.15□□□□□ -1.42
TRIM47Q96LD4 AC008033.2-201ENST00000542626 177 ntBASIC6.15□□□□□ -1.42
TRIM47Q96LD4 DYNLL1P4-201ENST00000549314 266 ntBASIC6.15□□□□□ -1.42
TRIM47Q96LD4 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC6.15□□□□□ -1.42
TRIM47Q96LD4 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC6.15□□□□□ -1.42
TRIM47Q96LD4 SS18L2P2-201ENST00000583960 235 ntBASIC6.15□□□□□ -1.42
TRIM47Q96LD4 VN1R91P-201ENST00000594377 169 ntBASIC6.15□□□□□ -1.42
TRIM47Q96LD4 AC068790.4-201ENST00000602474 263 ntBASIC6.15□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 75.7 ms