Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.37□□□□□ -1.87
PDLIM5Q96HC4 RPS7P13-201ENST00000413955 498 ntBASIC3.37□□□□□ -1.87
PDLIM5Q96HC4 TEX41-202ENST00000414256 604 ntTSL 5 BASIC3.37□□□□□ -1.87
PDLIM5Q96HC4 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
PDLIM5Q96HC4 USP9YP26-201ENST00000421008 661 ntBASIC3.37□□□□□ -1.87
PDLIM5Q96HC4 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC3.37□□□□□ -1.87
PDLIM5Q96HC4 RPL23AP82-202ENST00000427528 469 ntBASIC3.37□□□□□ -1.87
PDLIM5Q96HC4 ATP5JP1-201ENST00000431631 322 ntBASIC3.37□□□□□ -1.87
PDLIM5Q96HC4 BX679664.1-201ENST00000434429 253 ntBASIC3.37□□□□□ -1.87
PDLIM5Q96HC4 AC008264.1-201ENST00000447612 367 ntBASIC3.37□□□□□ -1.87
PDLIM5Q96HC4 AC097262.1-201ENST00000452559 548 ntBASIC3.37□□□□□ -1.87
PDLIM5Q96HC4 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC3.37□□□□□ -1.87
PDLIM5Q96HC4 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC3.37□□□□□ -1.87
PDLIM5Q96HC4 CENPBD1P1-201ENST00000464061 469 ntBASIC3.37□□□□□ -1.87
PDLIM5Q96HC4 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.37□□□□□ -1.87
PDLIM5Q96HC4 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC3.37□□□□□ -1.87
PDLIM5Q96HC4 RPL32P34-201ENST00000486380 400 ntBASIC3.37□□□□□ -1.87
PDLIM5Q96HC4 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC3.37□□□□□ -1.87
PDLIM5Q96HC4 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.37□□□□□ -1.87
PDLIM5Q96HC4 MTND4LP22-201ENST00000508209 276 ntBASIC3.37□□□□□ -1.87
PDLIM5Q96HC4 HSPE1P23-201ENST00000509838 286 ntBASIC3.37□□□□□ -1.87
PDLIM5Q96HC4 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
PDLIM5Q96HC4 MIR2276-201ENST00000516886 89 ntBASIC3.37□□□□□ -1.87
PDLIM5Q96HC4 AC105185.1-201ENST00000518705 535 ntBASIC3.37□□□□□ -1.87
PDLIM5Q96HC4 GTF2IP22-201ENST00000554443 182 ntBASIC3.37□□□□□ -1.87
PDLIM5Q96HC4 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC3.37□□□□□ -1.87
PDLIM5Q96HC4 AC004223.2-201ENST00000590309 544 ntBASIC3.37□□□□□ -1.87
PDLIM5Q96HC4 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC3.37□□□□□ -1.87
PDLIM5Q96HC4 Z99497.2-201ENST00000603634 310 ntBASIC3.37□□□□□ -1.87
PDLIM5Q96HC4 AL031281.1-201ENST00000604049 488 ntBASIC3.37□□□□□ -1.87
PDLIM5Q96HC4 AC092354.2-201ENST00000607786 514 ntBASIC3.37□□□□□ -1.87
PDLIM5Q96HC4 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC3.37□□□□□ -1.87
PDLIM5Q96HC4 AL590099.1-201ENST00000615276 138 ntBASIC3.37□□□□□ -1.87
PDLIM5Q96HC4 AL138880.2-201ENST00000616214 239 ntBASIC3.37□□□□□ -1.87
PDLIM5Q96HC4 AC004777.1-201ENST00000624317 287 ntBASIC3.37□□□□□ -1.87
PDLIM5Q96HC4 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC3.37□□□□□ -1.87
PDLIM5Q96HC4 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC3.37□□□□□ -1.87
PDLIM5Q96HC4 MIR3974-201ENST00000637126 96 ntBASIC3.37□□□□□ -1.87
PDLIM5Q96HC4 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC3.37□□□□□ -1.87
PDLIM5Q96HC4 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.37□□□□□ -1.87
PDLIM5Q96HC4 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.37□□□□□ -1.87
PDLIM5Q96HC4 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
PDLIM5Q96HC4 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
PDLIM5Q96HC4 AC103988.1-201ENST00000566382 2177 ntBASIC3.36□□□□□ -1.87
PDLIM5Q96HC4 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.36□□□□□ -1.87
PDLIM5Q96HC4 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
PDLIM5Q96HC4 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
PDLIM5Q96HC4 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
PDLIM5Q96HC4 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
PDLIM5Q96HC4 RNA5SP124-201ENST00000362739 110 ntBASIC3.36□□□□□ -1.87
PDLIM5Q96HC4 RNA5SP31-201ENST00000411144 127 ntBASIC3.36□□□□□ -1.87
PDLIM5Q96HC4 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC3.36□□□□□ -1.87
PDLIM5Q96HC4 RPL21P40-201ENST00000428586 483 ntBASIC3.36□□□□□ -1.87
PDLIM5Q96HC4 AC092641.1-201ENST00000440229 772 ntBASIC3.36□□□□□ -1.87
PDLIM5Q96HC4 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC3.36□□□□□ -1.87
PDLIM5Q96HC4 TXNP1-201ENST00000441872 371 ntBASIC3.36□□□□□ -1.87
PDLIM5Q96HC4 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
PDLIM5Q96HC4 MTCYBP3-201ENST00000445588 1137 ntBASIC3.36□□□□□ -1.87
PDLIM5Q96HC4 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC3.36□□□□□ -1.87
PDLIM5Q96HC4 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.36□□□□□ -1.87
PDLIM5Q96HC4 AC140076.1-201ENST00000449897 361 ntBASIC3.36□□□□□ -1.87
PDLIM5Q96HC4 ZNF736P5Y-201ENST00000451173 805 ntBASIC3.36□□□□□ -1.87
PDLIM5Q96HC4 AC006539.3-201ENST00000454258 129 ntBASIC3.36□□□□□ -1.87
PDLIM5Q96HC4 AL109741.2-201ENST00000455561 343 ntBASIC3.36□□□□□ -1.87
PDLIM5Q96HC4 RNU7-136P-201ENST00000458819 69 ntBASIC3.36□□□□□ -1.87
PDLIM5Q96HC4 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC3.36□□□□□ -1.87
PDLIM5Q96HC4 AL049714.1-201ENST00000466686 347 ntBASIC3.36□□□□□ -1.87
PDLIM5Q96HC4 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.36□□□□□ -1.87
PDLIM5Q96HC4 AC105313.1-201ENST00000509121 353 ntBASIC3.36□□□□□ -1.87
PDLIM5Q96HC4 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.36□□□□□ -1.87
PDLIM5Q96HC4 AC104619.4-201ENST00000510773 249 ntBASIC3.36□□□□□ -1.87
PDLIM5Q96HC4 AC010587.2-201ENST00000511727 448 ntBASIC3.36□□□□□ -1.87
PDLIM5Q96HC4 AC118465.1-201ENST00000513820 1271 ntBASIC3.36□□□□□ -1.87
PDLIM5Q96HC4 AC107934.2-201ENST00000518653 310 ntBASIC3.36□□□□□ -1.87
PDLIM5Q96HC4 ELOCP32-201ENST00000548625 324 ntBASIC3.36□□□□□ -1.87
PDLIM5Q96HC4 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC3.36□□□□□ -1.87
PDLIM5Q96HC4 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.36□□□□□ -1.87
PDLIM5Q96HC4 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.36□□□□□ -1.87
PDLIM5Q96HC4 AC090888.1-201ENST00000561335 1141 ntBASIC3.36□□□□□ -1.87
PDLIM5Q96HC4 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC3.36□□□□□ -1.87
PDLIM5Q96HC4 CASC16-202ENST00000563844 610 ntTSL 3 BASIC3.36□□□□□ -1.87
PDLIM5Q96HC4 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC3.36□□□□□ -1.87
PDLIM5Q96HC4 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.36□□□□□ -1.87
PDLIM5Q96HC4 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC3.36□□□□□ -1.87
PDLIM5Q96HC4 AC022146.1-201ENST00000595307 847 ntBASIC3.36□□□□□ -1.87
PDLIM5Q96HC4 AC010620.1-201ENST00000601088 1102 ntBASIC3.36□□□□□ -1.87
PDLIM5Q96HC4 Z94722.1-201ENST00000604328 474 ntBASIC3.36□□□□□ -1.87
PDLIM5Q96HC4 AL592221.1-201ENST00000605266 382 ntBASIC3.36□□□□□ -1.87
PDLIM5Q96HC4 AL603755.1-201ENST00000619504 163 ntBASIC3.36□□□□□ -1.87
PDLIM5Q96HC4 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
PDLIM5Q96HC4 AC026422.1-201ENST00000623961 452 ntBASIC3.36□□□□□ -1.87
PDLIM5Q96HC4 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.36□□□□□ -1.87
PDLIM5Q96HC4 AC244258.1-201ENST00000637553 1071 ntBASIC3.36□□□□□ -1.87
PDLIM5Q96HC4 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.36□□□□□ -1.87
PDLIM5Q96HC4 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.36□□□□□ -1.87
PDLIM5Q96HC4 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.36□□□□□ -1.87
PDLIM5Q96HC4 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.36□□□□□ -1.87
PDLIM5Q96HC4 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.35□□□□□ -1.87
PDLIM5Q96HC4 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.35□□□□□ -1.87
PDLIM5Q96HC4 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.35□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 75.5 ms