Protein–RNA interactions for Protein: Q96FC9

DDX11, ATP-dependent DNA helicase DDX11, humanhuman

Predictions only

Length 970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11Q96FC9 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC5.08□□□□□ -1.6
DDX11Q96FC9 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
DDX11Q96FC9 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
DDX11Q96FC9 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
DDX11Q96FC9 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
DDX11Q96FC9 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC5.07□□□□□ -1.6
DDX11Q96FC9 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
DDX11Q96FC9 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC5.07□□□□□ -1.6
DDX11Q96FC9 MIR3065-201ENST00000390137 79 ntBASIC5.07□□□□□ -1.6
DDX11Q96FC9 SNORA11F-201ENST00000408237 128 ntBASIC5.07□□□□□ -1.6
DDX11Q96FC9 MTATP6P18-201ENST00000417994 673 ntBASIC5.07□□□□□ -1.6
DDX11Q96FC9 RPL36AP36-201ENST00000418616 301 ntBASIC5.07□□□□□ -1.6
DDX11Q96FC9 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC5.07□□□□□ -1.6
DDX11Q96FC9 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC5.07□□□□□ -1.6
DDX11Q96FC9 MTND2P23-201ENST00000422990 651 ntBASIC5.07□□□□□ -1.6
DDX11Q96FC9 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC5.07□□□□□ -1.6
DDX11Q96FC9 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC5.07□□□□□ -1.6
DDX11Q96FC9 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC5.07□□□□□ -1.6
DDX11Q96FC9 AC114495.1-201ENST00000441274 436 ntBASIC5.07□□□□□ -1.6
DDX11Q96FC9 FAM103A2P-201ENST00000444122 354 ntBASIC5.07□□□□□ -1.6
DDX11Q96FC9 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC5.07□□□□□ -1.6
DDX11Q96FC9 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC5.07□□□□□ -1.6
DDX11Q96FC9 RPS3AP50-201ENST00000487064 803 ntBASIC5.07□□□□□ -1.6
DDX11Q96FC9 AC096576.1-201ENST00000489014 359 ntBASIC5.07□□□□□ -1.6
DDX11Q96FC9 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC5.07□□□□□ -1.6
DDX11Q96FC9 Vault.3-201ENST00000516676 95 ntBASIC5.07□□□□□ -1.6
DDX11Q96FC9 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC5.07□□□□□ -1.6
DDX11Q96FC9 AC105029.1-201ENST00000520250 669 ntBASIC5.07□□□□□ -1.6
DDX11Q96FC9 ARL6IP1P1-201ENST00000545836 610 ntBASIC5.07□□□□□ -1.6
DDX11Q96FC9 NACA-211ENST00000548563 827 ntTSL 5 BASIC5.07□□□□□ -1.6
DDX11Q96FC9 ARL1-211ENST00000551828 776 ntTSL 5 BASIC5.07□□□□□ -1.6
DDX11Q96FC9 AL352979.3-201ENST00000553515 247 ntBASIC5.07□□□□□ -1.6
DDX11Q96FC9 MIR3167-201ENST00000579623 85 ntBASIC5.07□□□□□ -1.6
DDX11Q96FC9 AC079587.1-201ENST00000603846 277 ntBASIC5.07□□□□□ -1.6
DDX11Q96FC9 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC5.07□□□□□ -1.6
DDX11Q96FC9 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC5.07□□□□□ -1.6
DDX11Q96FC9 AC007546.1-201ENST00000619452 559 ntBASIC5.07□□□□□ -1.6
DDX11Q96FC9 AC024940.5-201ENST00000622889 474 ntBASIC5.07□□□□□ -1.6
DDX11Q96FC9 BMS1P21-201ENST00000634565 365 ntBASIC5.07□□□□□ -1.6
DDX11Q96FC9 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
DDX11Q96FC9 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
DDX11Q96FC9 ZNF33BP1-201ENST00000452497 1834 ntBASIC5.07□□□□□ -1.6
DDX11Q96FC9 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC5.06□□□□□ -1.6
DDX11Q96FC9 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
DDX11Q96FC9 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC5.06□□□□□ -1.6
DDX11Q96FC9 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC5.06□□□□□ -1.6
DDX11Q96FC9 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
DDX11Q96FC9 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC5.06□□□□□ -1.6
DDX11Q96FC9 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
DDX11Q96FC9 Y_RNA.419-201ENST00000384041 102 ntBASIC5.06□□□□□ -1.6
DDX11Q96FC9 AC016769.3-201ENST00000396562 315 ntBASIC5.06□□□□□ -1.6
DDX11Q96FC9 RNU6-373P-201ENST00000411247 98 ntBASIC5.06□□□□□ -1.6
DDX11Q96FC9 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC5.06□□□□□ -1.6
DDX11Q96FC9 AC019097.1-201ENST00000424783 735 ntBASIC5.06□□□□□ -1.6
DDX11Q96FC9 AL136380.1-201ENST00000447970 162 ntBASIC5.06□□□□□ -1.6
DDX11Q96FC9 ABCF2P2-201ENST00000450549 296 ntBASIC5.06□□□□□ -1.6
DDX11Q96FC9 AC233279.1-201ENST00000455300 423 ntBASIC5.06□□□□□ -1.6
DDX11Q96FC9 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC5.06□□□□□ -1.6
DDX11Q96FC9 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC5.06□□□□□ -1.6
DDX11Q96FC9 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
DDX11Q96FC9 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC5.06□□□□□ -1.6
DDX11Q96FC9 RNU6-277P-201ENST00000516272 106 ntBASIC5.06□□□□□ -1.6
DDX11Q96FC9 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC5.06□□□□□ -1.6
DDX11Q96FC9 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC5.06□□□□□ -1.6
DDX11Q96FC9 AC243972.3-201ENST00000539655 198 ntBASIC5.06□□□□□ -1.6
DDX11Q96FC9 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC5.06□□□□□ -1.6
DDX11Q96FC9 AC011611.1-201ENST00000552179 197 ntBASIC5.06□□□□□ -1.6
DDX11Q96FC9 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC5.06□□□□□ -1.6
DDX11Q96FC9 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC5.06□□□□□ -1.6
DDX11Q96FC9 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC5.06□□□□□ -1.6
DDX11Q96FC9 MIR3118-1-201ENST00000581787 76 ntBASIC5.06□□□□□ -1.6
DDX11Q96FC9 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC5.06□□□□□ -1.6
DDX11Q96FC9 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC5.06□□□□□ -1.6
DDX11Q96FC9 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC5.06□□□□□ -1.6
DDX11Q96FC9 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC5.06□□□□□ -1.6
DDX11Q96FC9 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC5.06□□□□□ -1.6
DDX11Q96FC9 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC5.06□□□□□ -1.6
DDX11Q96FC9 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
DDX11Q96FC9 XPOTP1-201ENST00000443317 2398 ntBASIC5.06□□□□□ -1.6
DDX11Q96FC9 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
DDX11Q96FC9 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
DDX11Q96FC9 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC5.05□□□□□ -1.6
DDX11Q96FC9 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
DDX11Q96FC9 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
DDX11Q96FC9 AL158163.1-201ENST00000603915 1649 ntBASIC5.05□□□□□ -1.6
DDX11Q96FC9 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
DDX11Q96FC9 AL049780.3-201ENST00000624612 1583 ntBASIC5.05□□□□□ -1.6
DDX11Q96FC9 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
DDX11Q96FC9 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
DDX11Q96FC9 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC5.05□□□□□ -1.6
DDX11Q96FC9 RNU6-744P-201ENST00000365557 107 ntBASIC5.05□□□□□ -1.6
DDX11Q96FC9 RNU6-1316P-201ENST00000384242 108 ntBASIC5.05□□□□□ -1.6
DDX11Q96FC9 AL022722.2-201ENST00000402519 180 ntBASIC5.05□□□□□ -1.6
DDX11Q96FC9 RNU6-1068P-201ENST00000410958 103 ntBASIC5.05□□□□□ -1.6
DDX11Q96FC9 RNA5SP104-201ENST00000410989 118 ntBASIC5.05□□□□□ -1.6
DDX11Q96FC9 MRPL50P2-201ENST00000416821 482 ntBASIC5.05□□□□□ -1.6
DDX11Q96FC9 MTCO2P5-201ENST00000422621 426 ntBASIC5.05□□□□□ -1.6
DDX11Q96FC9 AL353777.1-201ENST00000425552 326 ntBASIC5.05□□□□□ -1.6
DDX11Q96FC9 MTCO2P12-201ENST00000427426 682 ntBASIC5.05□□□□□ -1.6
DDX11Q96FC9 RPL36P19-201ENST00000430744 301 ntBASIC5.05□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms