Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 AC092634.2-201ENST00000428146 1010 ntBASIC2.77□□□□□ -1.97
ECHDC3Q96DC8 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
ECHDC3Q96DC8 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
ECHDC3Q96DC8 MRPL42P4-201ENST00000453267 443 ntBASIC2.77□□□□□ -1.97
ECHDC3Q96DC8 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC2.77□□□□□ -1.97
ECHDC3Q96DC8 VN1R104P-201ENST00000505115 1009 ntBASIC2.77□□□□□ -1.97
ECHDC3Q96DC8 RNA5SP356-201ENST00000515972 94 ntBASIC2.77□□□□□ -1.97
ECHDC3Q96DC8 AC023632.1-201ENST00000518463 375 ntBASIC2.77□□□□□ -1.97
ECHDC3Q96DC8 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
ECHDC3Q96DC8 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC2.77□□□□□ -1.97
ECHDC3Q96DC8 SETP2-201ENST00000553886 926 ntBASIC2.77□□□□□ -1.97
ECHDC3Q96DC8 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC2.77□□□□□ -1.97
ECHDC3Q96DC8 AC007954.1-201ENST00000554198 494 ntBASIC2.77□□□□□ -1.97
ECHDC3Q96DC8 MTCYBP27-201ENST00000555160 670 ntBASIC2.77□□□□□ -1.97
ECHDC3Q96DC8 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC2.77□□□□□ -1.97
ECHDC3Q96DC8 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC2.77□□□□□ -1.97
ECHDC3Q96DC8 MIR3605-201ENST00000583214 100 ntBASIC2.77□□□□□ -1.97
ECHDC3Q96DC8 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.77□□□□□ -1.97
ECHDC3Q96DC8 AC006504.3-201ENST00000586818 523 ntBASIC2.77□□□□□ -1.97
ECHDC3Q96DC8 ZNF861P-201ENST00000588126 639 ntBASIC2.77□□□□□ -1.97
ECHDC3Q96DC8 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC2.77□□□□□ -1.97
ECHDC3Q96DC8 DUXAP4-201ENST00000603046 613 ntBASIC2.77□□□□□ -1.97
ECHDC3Q96DC8 CYP3A51P-201ENST00000633513 256 ntBASIC2.77□□□□□ -1.97
ECHDC3Q96DC8 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
ECHDC3Q96DC8 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
ECHDC3Q96DC8 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC2.77□□□□□ -1.97
ECHDC3Q96DC8 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
ECHDC3Q96DC8 AC108206.1-201ENST00000570186 4159 ntBASIC2.76□□□□□ -1.97
ECHDC3Q96DC8 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
ECHDC3Q96DC8 RNU6-657P-201ENST00000383904 107 ntBASIC2.76□□□□□ -1.97
ECHDC3Q96DC8 RNA5SP252-201ENST00000391131 119 ntBASIC2.76□□□□□ -1.97
ECHDC3Q96DC8 MCTS2P-201ENST00000394552 546 ntBASIC2.76□□□□□ -1.97
ECHDC3Q96DC8 MIR1289-1-201ENST00000408836 144 ntBASIC2.76□□□□□ -1.97
ECHDC3Q96DC8 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC2.76□□□□□ -1.97
ECHDC3Q96DC8 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC2.76□□□□□ -1.97
ECHDC3Q96DC8 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC2.76□□□□□ -1.97
ECHDC3Q96DC8 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC2.76□□□□□ -1.97
ECHDC3Q96DC8 RN7SL499P-201ENST00000481141 276 ntBASIC2.76□□□□□ -1.97
ECHDC3Q96DC8 AC093801.2-201ENST00000503966 1050 ntBASIC2.76□□□□□ -1.97
ECHDC3Q96DC8 CBX3P3-201ENST00000508108 532 ntBASIC2.76□□□□□ -1.97
ECHDC3Q96DC8 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC2.76□□□□□ -1.97
ECHDC3Q96DC8 RNU5A-7P-201ENST00000515979 116 ntBASIC2.76□□□□□ -1.97
ECHDC3Q96DC8 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC2.76□□□□□ -1.97
ECHDC3Q96DC8 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC2.76□□□□□ -1.97
ECHDC3Q96DC8 AC027309.2-201ENST00000520566 192 ntBASIC2.76□□□□□ -1.97
ECHDC3Q96DC8 AC090502.2-201ENST00000549267 280 ntBASIC2.76□□□□□ -1.97
ECHDC3Q96DC8 AL136520.1-202ENST00000555494 763 ntBASIC2.76□□□□□ -1.97
ECHDC3Q96DC8 MED28P6-201ENST00000558776 231 ntBASIC2.76□□□□□ -1.97
ECHDC3Q96DC8 AC093510.2-201ENST00000562820 896 ntBASIC2.76□□□□□ -1.97
ECHDC3Q96DC8 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC2.76□□□□□ -1.97
ECHDC3Q96DC8 LARP7P2-201ENST00000575306 125 ntBASIC2.76□□□□□ -1.97
ECHDC3Q96DC8 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
ECHDC3Q96DC8 AC090330.1-201ENST00000588646 764 ntBASIC2.76□□□□□ -1.97
ECHDC3Q96DC8 NUTF2P8-201ENST00000604593 363 ntBASIC2.76□□□□□ -1.97
ECHDC3Q96DC8 AC007275.1-201ENST00000621243 671 ntBASIC2.76□□□□□ -1.97
ECHDC3Q96DC8 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC2.76□□□□□ -1.97
ECHDC3Q96DC8 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.75□□□□□ -1.97
ECHDC3Q96DC8 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.75□□□□□ -1.97
ECHDC3Q96DC8 AL513185.3-201ENST00000433335 1300 ntBASIC2.75□□□□□ -1.97
ECHDC3Q96DC8 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.75□□□□□ -1.97
ECHDC3Q96DC8 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
ECHDC3Q96DC8 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
ECHDC3Q96DC8 RPL9P7-201ENST00000330965 580 ntBASIC2.75□□□□□ -1.97
ECHDC3Q96DC8 RNU6-1155P-201ENST00000363554 107 ntBASIC2.75□□□□□ -1.97
ECHDC3Q96DC8 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC2.75□□□□□ -1.97
ECHDC3Q96DC8 SNORA1.3-201ENST00000384676 136 ntBASIC2.75□□□□□ -1.97
ECHDC3Q96DC8 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC2.75□□□□□ -1.97
ECHDC3Q96DC8 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC2.75□□□□□ -1.97
ECHDC3Q96DC8 TMEM167AP1-201ENST00000423409 219 ntBASIC2.75□□□□□ -1.97
ECHDC3Q96DC8 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC2.75□□□□□ -1.97
ECHDC3Q96DC8 AC112220.1-201ENST00000434628 355 ntBASIC2.75□□□□□ -1.97
ECHDC3Q96DC8 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC2.75□□□□□ -1.97
ECHDC3Q96DC8 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC2.75□□□□□ -1.97
ECHDC3Q96DC8 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC2.75□□□□□ -1.97
ECHDC3Q96DC8 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.75□□□□□ -1.97
ECHDC3Q96DC8 AC090525.1-201ENST00000479116 478 ntBASIC2.75□□□□□ -1.97
ECHDC3Q96DC8 AC004924.1-201ENST00000480160 781 ntBASIC2.75□□□□□ -1.97
ECHDC3Q96DC8 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC2.75□□□□□ -1.97
ECHDC3Q96DC8 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC2.75□□□□□ -1.97
ECHDC3Q96DC8 SNORA9.3-201ENST00000516383 129 ntBASIC2.75□□□□□ -1.97
ECHDC3Q96DC8 RNU1-103P-201ENST00000516502 125 ntBASIC2.75□□□□□ -1.97
ECHDC3Q96DC8 snoZ278.1-201ENST00000517059 112 ntBASIC2.75□□□□□ -1.97
ECHDC3Q96DC8 IGHVII-62-1-201ENST00000519283 235 ntBASIC2.75□□□□□ -1.97
ECHDC3Q96DC8 COX6CP8-201ENST00000522620 226 ntBASIC2.75□□□□□ -1.97
ECHDC3Q96DC8 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC2.75□□□□□ -1.97
ECHDC3Q96DC8 AP000857.1-201ENST00000532151 543 ntBASIC2.75□□□□□ -1.97
ECHDC3Q96DC8 AP005205.1-201ENST00000563503 508 ntBASIC2.75□□□□□ -1.97
ECHDC3Q96DC8 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC2.75□□□□□ -1.97
ECHDC3Q96DC8 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC2.75□□□□□ -1.97
ECHDC3Q96DC8 RPL23AP92-201ENST00000603609 255 ntBASIC2.75□□□□□ -1.97
ECHDC3Q96DC8 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC2.75□□□□□ -1.97
ECHDC3Q96DC8 AC008759.3-201ENST00000613300 508 ntBASIC2.75□□□□□ -1.97
ECHDC3Q96DC8 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC2.75□□□□□ -1.97
ECHDC3Q96DC8 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
ECHDC3Q96DC8 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC2.75□□□□□ -1.97
ECHDC3Q96DC8 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC2.74□□□□□ -1.97
ECHDC3Q96DC8 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC2.74□□□□□ -1.97
ECHDC3Q96DC8 RNU6-1066P-201ENST00000363573 105 ntBASIC2.74□□□□□ -1.97
ECHDC3Q96DC8 Y_RNA.510-201ENST00000384511 114 ntBASIC2.74□□□□□ -1.97
ECHDC3Q96DC8 MIR634-201ENST00000385208 97 ntBASIC2.74□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 82.9 ms