Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 AC009237.8-201ENST00000445492 379 ntBASIC3.41□□□□□ -1.86
VPS33AQ96AX1 RPS3AP46-201ENST00000448352 682 ntBASIC3.41□□□□□ -1.86
VPS33AQ96AX1 AC104978.1-201ENST00000449387 391 ntBASIC3.41□□□□□ -1.86
VPS33AQ96AX1 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC3.41□□□□□ -1.86
VPS33AQ96AX1 AC010401.1-201ENST00000463867 348 ntBASIC3.41□□□□□ -1.86
VPS33AQ96AX1 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
VPS33AQ96AX1 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC3.41□□□□□ -1.86
VPS33AQ96AX1 AC110768.1-201ENST00000509222 400 ntBASIC3.41□□□□□ -1.86
VPS33AQ96AX1 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC3.41□□□□□ -1.86
VPS33AQ96AX1 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC3.41□□□□□ -1.86
VPS33AQ96AX1 RNU6-579P-201ENST00000516879 102 ntBASIC3.41□□□□□ -1.86
VPS33AQ96AX1 NAP1L1P1-201ENST00000524793 1063 ntBASIC3.41□□□□□ -1.86
VPS33AQ96AX1 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC3.41□□□□□ -1.86
VPS33AQ96AX1 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC3.41□□□□□ -1.86
VPS33AQ96AX1 AC026333.2-201ENST00000542164 106 ntBASIC3.41□□□□□ -1.86
VPS33AQ96AX1 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
VPS33AQ96AX1 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC3.41□□□□□ -1.86
VPS33AQ96AX1 ANKRD36BP2-206ENST00000575193 1245 ntBASIC3.41□□□□□ -1.86
VPS33AQ96AX1 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC3.41□□□□□ -1.86
VPS33AQ96AX1 MIR544B-201ENST00000582372 78 ntBASIC3.41□□□□□ -1.86
VPS33AQ96AX1 AC093227.2-201ENST00000589357 285 ntBASIC3.41□□□□□ -1.86
VPS33AQ96AX1 BNIP3P23-201ENST00000599655 511 ntBASIC3.41□□□□□ -1.86
VPS33AQ96AX1 AL031985.2-201ENST00000600955 480 ntBASIC3.41□□□□□ -1.86
VPS33AQ96AX1 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC3.41□□□□□ -1.86
VPS33AQ96AX1 AC112187.2-201ENST00000604345 283 ntBASIC3.41□□□□□ -1.86
VPS33AQ96AX1 AL590392.1-201ENST00000604960 446 ntBASIC3.41□□□□□ -1.86
VPS33AQ96AX1 AC018714.1-201ENST00000605028 208 ntBASIC3.41□□□□□ -1.86
VPS33AQ96AX1 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC3.41□□□□□ -1.86
VPS33AQ96AX1 AC093838.1-201ENST00000613014 469 ntBASIC3.41□□□□□ -1.86
VPS33AQ96AX1 AC079395.3-201ENST00000615161 484 ntBASIC3.41□□□□□ -1.86
VPS33AQ96AX1 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC3.41□□□□□ -1.86
VPS33AQ96AX1 AL031667.3-201ENST00000620124 655 ntBASIC3.41□□□□□ -1.86
VPS33AQ96AX1 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC3.41□□□□□ -1.86
VPS33AQ96AX1 AC008993.2-201ENST00000631744 806 ntBASIC3.41□□□□□ -1.86
VPS33AQ96AX1 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.41□□□□□ -1.86
VPS33AQ96AX1 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
VPS33AQ96AX1 ANKRD26P2-201ENST00000445530 1710 ntBASIC3.41□□□□□ -1.86
VPS33AQ96AX1 MTND5P33-201ENST00000571250 1450 ntBASIC3.41□□□□□ -1.86
VPS33AQ96AX1 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
VPS33AQ96AX1 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
VPS33AQ96AX1 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.4□□□□□ -1.86
VPS33AQ96AX1 AL138713.1-201ENST00000624026 2130 ntBASIC3.4□□□□□ -1.86
VPS33AQ96AX1 MAPK10-362ENST00000641864 4484 ntBASIC3.4□□□□□ -1.86
VPS33AQ96AX1 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
VPS33AQ96AX1 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.4□□□□□ -1.87
VPS33AQ96AX1 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
VPS33AQ96AX1 SNORA23-201ENST00000365128 182 ntBASIC3.4□□□□□ -1.87
VPS33AQ96AX1 AC068538.1-201ENST00000376856 336 ntBASIC3.4□□□□□ -1.87
VPS33AQ96AX1 RNU6-769P-201ENST00000384407 104 ntBASIC3.4□□□□□ -1.87
VPS33AQ96AX1 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.4□□□□□ -1.87
VPS33AQ96AX1 HMGB1P11-201ENST00000413899 637 ntBASIC3.4□□□□□ -1.87
VPS33AQ96AX1 RPL23AP39-201ENST00000415533 405 ntBASIC3.4□□□□□ -1.87
VPS33AQ96AX1 AC068533.1-201ENST00000418542 415 ntBASIC3.4□□□□□ -1.87
VPS33AQ96AX1 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC3.4□□□□□ -1.87
VPS33AQ96AX1 AL445669.1-201ENST00000426743 755 ntBASIC3.4□□□□□ -1.87
VPS33AQ96AX1 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC3.4□□□□□ -1.87
VPS33AQ96AX1 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC3.4□□□□□ -1.87
VPS33AQ96AX1 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC3.4□□□□□ -1.87
VPS33AQ96AX1 FAM103A2P-201ENST00000444122 354 ntBASIC3.4□□□□□ -1.87
VPS33AQ96AX1 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.4□□□□□ -1.87
VPS33AQ96AX1 AL162389.1-201ENST00000449233 177 ntBASIC3.4□□□□□ -1.87
VPS33AQ96AX1 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC3.4□□□□□ -1.87
VPS33AQ96AX1 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC3.4□□□□□ -1.87
VPS33AQ96AX1 OR6K1P-201ENST00000456766 971 ntBASIC3.4□□□□□ -1.87
VPS33AQ96AX1 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC3.4□□□□□ -1.87
VPS33AQ96AX1 AC091564.1-201ENST00000464563 479 ntBASIC3.4□□□□□ -1.87
VPS33AQ96AX1 RN7SL442P-201ENST00000473804 320 ntBASIC3.4□□□□□ -1.87
VPS33AQ96AX1 AC021678.1-201ENST00000505195 936 ntBASIC3.4□□□□□ -1.87
VPS33AQ96AX1 AC010460.1-201ENST00000507087 466 ntBASIC3.4□□□□□ -1.87
VPS33AQ96AX1 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
VPS33AQ96AX1 AC112673.1-201ENST00000513168 575 ntBASIC3.4□□□□□ -1.87
VPS33AQ96AX1 OR5G4P-201ENST00000525251 760 ntBASIC3.4□□□□□ -1.87
VPS33AQ96AX1 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC3.4□□□□□ -1.87
VPS33AQ96AX1 ELOCP32-201ENST00000548625 324 ntBASIC3.4□□□□□ -1.87
VPS33AQ96AX1 AC124947.2-202ENST00000552735 133 ntBASIC3.4□□□□□ -1.87
VPS33AQ96AX1 DUXAP6-201ENST00000553858 601 ntBASIC3.4□□□□□ -1.87
VPS33AQ96AX1 OR4T1P-201ENST00000554933 911 ntBASIC3.4□□□□□ -1.87
VPS33AQ96AX1 HMGB1P14-201ENST00000557424 591 ntBASIC3.4□□□□□ -1.87
VPS33AQ96AX1 RN7SL703P-201ENST00000578485 302 ntBASIC3.4□□□□□ -1.87
VPS33AQ96AX1 VN1R90P-201ENST00000595717 726 ntBASIC3.4□□□□□ -1.87
VPS33AQ96AX1 AL357094.1-201ENST00000603845 844 ntBASIC3.4□□□□□ -1.87
VPS33AQ96AX1 BCRP9-201ENST00000605312 388 ntBASIC3.4□□□□□ -1.87
VPS33AQ96AX1 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC3.4□□□□□ -1.87
VPS33AQ96AX1 AC005344.1-201ENST00000613391 459 ntBASIC3.4□□□□□ -1.87
VPS33AQ96AX1 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
VPS33AQ96AX1 MIR6875-201ENST00000617506 72 ntBASIC3.4□□□□□ -1.87
VPS33AQ96AX1 AL354798.1-201ENST00000622505 329 ntBASIC3.4□□□□□ -1.87
VPS33AQ96AX1 AP000676.3-201ENST00000623299 569 ntBASIC3.4□□□□□ -1.87
VPS33AQ96AX1 AC110801.1-201ENST00000623590 212 ntBASIC3.4□□□□□ -1.87
VPS33AQ96AX1 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
VPS33AQ96AX1 AP000676.4-201ENST00000624659 623 ntBASIC3.4□□□□□ -1.87
VPS33AQ96AX1 RNA5SP196-201ENST00000625967 102 ntBASIC3.4□□□□□ -1.87
VPS33AQ96AX1 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC3.4□□□□□ -1.87
VPS33AQ96AX1 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.4□□□□□ -1.87
VPS33AQ96AX1 AC007496.3-201ENST00000624987 3443 ntBASIC3.4□□□□□ -1.87
VPS33AQ96AX1 AC093908.1-201ENST00000623125 8092 ntBASIC3.4□□□□□ -1.87
VPS33AQ96AX1 AP004289.2-201ENST00000444413 1457 ntBASIC3.4□□□□□ -1.87
VPS33AQ96AX1 AC110774.1-201ENST00000623567 2018 ntBASIC3.39□□□□□ -1.87
VPS33AQ96AX1 DPY19L2P2-203ENST00000435536 1858 ntBASIC3.39□□□□□ -1.87
VPS33AQ96AX1 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.39□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 98.2 ms