Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC1.35□□□□□ -2.19
ALMS1Q8TCU4 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC1.35□□□□□ -2.19
ALMS1Q8TCU4 AC110588.1-201ENST00000559699 137 ntBASIC1.35□□□□□ -2.19
ALMS1Q8TCU4 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC1.35□□□□□ -2.19
ALMS1Q8TCU4 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
ALMS1Q8TCU4 U8.10-201ENST00000384260 133 ntBASIC1.35□□□□□ -2.19
ALMS1Q8TCU4 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
ALMS1Q8TCU4 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC1.35□□□□□ -2.19
ALMS1Q8TCU4 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC1.35□□□□□ -2.19
ALMS1Q8TCU4 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC1.35□□□□□ -2.19
ALMS1Q8TCU4 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC1.35□□□□□ -2.19
ALMS1Q8TCU4 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC1.35□□□□□ -2.19
ALMS1Q8TCU4 RPS15AP12-201ENST00000419498 388 ntBASIC1.35□□□□□ -2.19
ALMS1Q8TCU4 AL445685.2-201ENST00000422551 342 ntBASIC1.35□□□□□ -2.19
ALMS1Q8TCU4 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC1.35□□□□□ -2.19
ALMS1Q8TCU4 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC1.35□□□□□ -2.19
ALMS1Q8TCU4 AC104472.2-201ENST00000469035 601 ntBASIC1.35□□□□□ -2.19
ALMS1Q8TCU4 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC1.35□□□□□ -2.19
ALMS1Q8TCU4 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC1.35□□□□□ -2.19
ALMS1Q8TCU4 MIR449C-201ENST00000516047 92 ntBASIC1.35□□□□□ -2.19
ALMS1Q8TCU4 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC1.35□□□□□ -2.19
ALMS1Q8TCU4 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC1.35□□□□□ -2.19
ALMS1Q8TCU4 AC092650.2-201ENST00000619984 902 ntBASIC1.35□□□□□ -2.19
ALMS1Q8TCU4 AP001486.2-201ENST00000561652 5113 ntBASIC1.35□□□□□ -2.19
ALMS1Q8TCU4 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC1.35□□□□□ -2.19
ALMS1Q8TCU4 ZNF720P1-201ENST00000562403 1939 ntBASIC1.35□□□□□ -2.19
ALMS1Q8TCU4 Z75741.2-201ENST00000417272 1167 ntBASIC1.34□□□□□ -2.19
ALMS1Q8TCU4 AC080013.2-201ENST00000460866 323 ntBASIC1.34□□□□□ -2.19
ALMS1Q8TCU4 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC1.34□□□□□ -2.19
ALMS1Q8TCU4 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC1.34□□□□□ -2.19
ALMS1Q8TCU4 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC1.34□□□□□ -2.19
ALMS1Q8TCU4 AC068339.2-201ENST00000534395 618 ntBASIC1.34□□□□□ -2.19
ALMS1Q8TCU4 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC1.34□□□□□ -2.19
ALMS1Q8TCU4 MIR3683-201ENST00000580847 82 ntBASIC1.34□□□□□ -2.19
ALMS1Q8TCU4 MIR3199-1-201ENST00000582434 88 ntBASIC1.34□□□□□ -2.19
ALMS1Q8TCU4 AL136520.1-201ENST00000600311 1322 ntBASIC1.34□□□□□ -2.19
ALMS1Q8TCU4 AC027514.1-201ENST00000588561 1603 ntBASIC1.34□□□□□ -2.19
ALMS1Q8TCU4 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC1.34□□□□□ -2.19
ALMS1Q8TCU4 MIR613-201ENST00000385248 95 ntBASIC1.34□□□□□ -2.19
ALMS1Q8TCU4 RNA5SP492-201ENST00000411330 114 ntBASIC1.34□□□□□ -2.19
ALMS1Q8TCU4 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC1.34□□□□□ -2.19
ALMS1Q8TCU4 AF279873.1-201ENST00000523393 313 ntBASIC1.34□□□□□ -2.19
ALMS1Q8TCU4 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC1.34□□□□□ -2.19
ALMS1Q8TCU4 ZDHHC20P3-201ENST00000531576 336 ntBASIC1.34□□□□□ -2.19
ALMS1Q8TCU4 AL391813.2-201ENST00000609113 322 ntBASIC1.34□□□□□ -2.19
ALMS1Q8TCU4 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC1.34□□□□□ -2.19
ALMS1Q8TCU4 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC1.34□□□□□ -2.19
ALMS1Q8TCU4 AL596028.1-201ENST00000326971 197 ntBASIC1.34□□□□□ -2.2
ALMS1Q8TCU4 OR5H15-201ENST00000383696 930 ntBASIC1.34□□□□□ -2.2
ALMS1Q8TCU4 XKRYP4-201ENST00000414395 483 ntBASIC1.34□□□□□ -2.2
ALMS1Q8TCU4 HSPE1P1-201ENST00000421494 318 ntBASIC1.34□□□□□ -2.2
ALMS1Q8TCU4 XKRYP5-201ENST00000449659 483 ntBASIC1.34□□□□□ -2.2
ALMS1Q8TCU4 RPL12P25-201ENST00000455592 494 ntBASIC1.34□□□□□ -2.2
ALMS1Q8TCU4 SNORD59.2-201ENST00000516873 68 ntBASIC1.34□□□□□ -2.2
ALMS1Q8TCU4 HSPE1P14-201ENST00000605812 302 ntBASIC1.34□□□□□ -2.2
ALMS1Q8TCU4 RBM12B-AS1-201ENST00000623283 653 ntBASIC1.34□□□□□ -2.2
ALMS1Q8TCU4 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC1.34□□□□□ -2.2
ALMS1Q8TCU4 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC1.34□□□□□ -2.2
ALMS1Q8TCU4 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
ALMS1Q8TCU4 RNA5SP393-201ENST00000363423 117 ntBASIC1.33□□□□□ -2.2
ALMS1Q8TCU4 Y_RNA.327-201ENST00000365201 102 ntBASIC1.33□□□□□ -2.2
ALMS1Q8TCU4 OR4K11P-201ENST00000431829 904 ntBASIC1.33□□□□□ -2.2
ALMS1Q8TCU4 RPL23AP58-201ENST00000440453 469 ntBASIC1.33□□□□□ -2.2
ALMS1Q8TCU4 RPL23AP16-201ENST00000441715 421 ntBASIC1.33□□□□□ -2.2
ALMS1Q8TCU4 RPS29P12-201ENST00000460178 152 ntBASIC1.33□□□□□ -2.2
ALMS1Q8TCU4 RNU6-711P-201ENST00000517255 106 ntBASIC1.33□□□□□ -2.2
ALMS1Q8TCU4 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC1.33□□□□□ -2.2
ALMS1Q8TCU4 IGHVIII-5-1-201ENST00000523059 99 ntBASIC1.33□□□□□ -2.2
ALMS1Q8TCU4 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC1.33□□□□□ -2.2
ALMS1Q8TCU4 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC1.33□□□□□ -2.2
ALMS1Q8TCU4 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC1.33□□□□□ -2.2
ALMS1Q8TCU4 AMZ2P1-203ENST00000565833 850 ntBASIC1.33□□□□□ -2.2
ALMS1Q8TCU4 PSMA6P4-201ENST00000603247 718 ntBASIC1.33□□□□□ -2.2
ALMS1Q8TCU4 DCAF13P1-201ENST00000495256 1330 ntBASIC1.33□□□□□ -2.2
ALMS1Q8TCU4 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
ALMS1Q8TCU4 SET-203ENST00000372688 801 ntTSL 2 BASIC1.33□□□□□ -2.2
ALMS1Q8TCU4 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC1.33□□□□□ -2.2
ALMS1Q8TCU4 REXO2-218ENST00000544827 880 ntTSL 3 BASIC1.33□□□□□ -2.2
ALMS1Q8TCU4 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC1.33□□□□□ -2.2
ALMS1Q8TCU4 MIR8081-201ENST00000611533 95 ntBASIC1.33□□□□□ -2.2
ALMS1Q8TCU4 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC1.33□□□□□ -2.2
ALMS1Q8TCU4 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
ALMS1Q8TCU4 AC004965.1-201ENST00000413033 213 ntBASIC1.33□□□□□ -2.2
ALMS1Q8TCU4 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC1.33□□□□□ -2.2
ALMS1Q8TCU4 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC1.33□□□□□ -2.2
ALMS1Q8TCU4 AC107398.1-201ENST00000486904 505 ntBASIC1.33□□□□□ -2.2
ALMS1Q8TCU4 AC068781.1-201ENST00000488231 618 ntBASIC1.33□□□□□ -2.2
ALMS1Q8TCU4 AC034244.1-201ENST00000507687 207 ntBASIC1.33□□□□□ -2.2
ALMS1Q8TCU4 RNU6ATAC9P-201ENST00000516210 116 ntBASIC1.33□□□□□ -2.2
ALMS1Q8TCU4 HSPE1P20-201ENST00000538133 289 ntBASIC1.33□□□□□ -2.2
ALMS1Q8TCU4 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC1.33□□□□□ -2.2
ALMS1Q8TCU4 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC1.33□□□□□ -2.2
ALMS1Q8TCU4 CR382285.2-201ENST00000624662 1495 ntBASIC1.33□□□□□ -2.2
ALMS1Q8TCU4 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC1.33□□□□□ -2.2
ALMS1Q8TCU4 MIR96-201ENST00000362288 78 ntBASIC1.33□□□□□ -2.2
ALMS1Q8TCU4 Y_RNA.374-201ENST00000365606 101 ntBASIC1.33□□□□□ -2.2
ALMS1Q8TCU4 AL627390.1-201ENST00000396055 340 ntBASIC1.33□□□□□ -2.2
ALMS1Q8TCU4 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC1.33□□□□□ -2.2
ALMS1Q8TCU4 AC234782.4-201ENST00000417646 1048 ntBASIC1.33□□□□□ -2.2
ALMS1Q8TCU4 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC1.33□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 99.8 ms