Protein–RNA interactions for Protein: Q8IWT1

SCN4B, Sodium channel subunit beta-4, humanhuman

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4BQ8IWT1 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC3.96□□□□□ -1.78
SCN4BQ8IWT1 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.96□□□□□ -1.78
SCN4BQ8IWT1 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
SCN4BQ8IWT1 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
SCN4BQ8IWT1 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
SCN4BQ8IWT1 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
SCN4BQ8IWT1 FRG1BP-201ENST00000278882 761 ntBASIC3.95□□□□□ -1.78
SCN4BQ8IWT1 SNORD74.4-201ENST00000364129 80 ntBASIC3.95□□□□□ -1.78
SCN4BQ8IWT1 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
SCN4BQ8IWT1 RNU6-348P-201ENST00000384386 107 ntBASIC3.95□□□□□ -1.78
SCN4BQ8IWT1 Y_RNA.505-201ENST00000384489 102 ntBASIC3.95□□□□□ -1.78
SCN4BQ8IWT1 U3.20-201ENST00000390909 217 ntBASIC3.95□□□□□ -1.78
SCN4BQ8IWT1 SOD2P1-201ENST00000396543 562 ntBASIC3.95□□□□□ -1.78
SCN4BQ8IWT1 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC3.95□□□□□ -1.78
SCN4BQ8IWT1 RPS7P15-201ENST00000415804 584 ntBASIC3.95□□□□□ -1.78
SCN4BQ8IWT1 TOMM22P1-201ENST00000418578 312 ntBASIC3.95□□□□□ -1.78
SCN4BQ8IWT1 USP9YP14-201ENST00000430663 563 ntBASIC3.95□□□□□ -1.78
SCN4BQ8IWT1 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC3.95□□□□□ -1.78
SCN4BQ8IWT1 UBE2V1P13-201ENST00000436983 439 ntBASIC3.95□□□□□ -1.78
SCN4BQ8IWT1 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
SCN4BQ8IWT1 AL022238.1-201ENST00000442557 355 ntBASIC3.95□□□□□ -1.78
SCN4BQ8IWT1 AC112653.1-201ENST00000443851 386 ntBASIC3.95□□□□□ -1.78
SCN4BQ8IWT1 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC3.95□□□□□ -1.78
SCN4BQ8IWT1 AC098824.1-201ENST00000453565 980 ntBASIC3.95□□□□□ -1.78
SCN4BQ8IWT1 AC104308.1-201ENST00000454621 333 ntBASIC3.95□□□□□ -1.78
SCN4BQ8IWT1 AC099563.1-201ENST00000456086 418 ntBASIC3.95□□□□□ -1.78
SCN4BQ8IWT1 RPL9P32-201ENST00000464118 620 ntBASIC3.95□□□□□ -1.78
SCN4BQ8IWT1 TMED11P-201ENST00000479478 690 ntBASIC3.95□□□□□ -1.78
SCN4BQ8IWT1 ACTR3BP4-201ENST00000503033 1244 ntBASIC3.95□□□□□ -1.78
SCN4BQ8IWT1 AC104619.4-201ENST00000510773 249 ntBASIC3.95□□□□□ -1.78
SCN4BQ8IWT1 RNU6-1073P-201ENST00000517182 106 ntBASIC3.95□□□□□ -1.78
SCN4BQ8IWT1 MTCYBP20-201ENST00000524239 1129 ntBASIC3.95□□□□□ -1.78
SCN4BQ8IWT1 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC3.95□□□□□ -1.78
SCN4BQ8IWT1 AC109635.4-202ENST00000531666 412 ntBASIC3.95□□□□□ -1.78
SCN4BQ8IWT1 AL121603.1-201ENST00000553815 142 ntBASIC3.95□□□□□ -1.78
SCN4BQ8IWT1 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC3.95□□□□□ -1.78
SCN4BQ8IWT1 AC009101.1-201ENST00000568135 242 ntBASIC3.95□□□□□ -1.78
SCN4BQ8IWT1 MIR4444-1-201ENST00000581696 74 ntBASIC3.95□□□□□ -1.78
SCN4BQ8IWT1 MIR4444-2-201ENST00000584390 74 ntBASIC3.95□□□□□ -1.78
SCN4BQ8IWT1 AC008638.3-201ENST00000603341 463 ntBASIC3.95□□□□□ -1.78
SCN4BQ8IWT1 AC006566.1-201ENST00000608943 513 ntBASIC3.95□□□□□ -1.78
SCN4BQ8IWT1 AC013562.2-201ENST00000611632 603 ntBASIC3.95□□□□□ -1.78
SCN4BQ8IWT1 AC015540.1-201ENST00000615828 501 ntBASIC3.95□□□□□ -1.78
SCN4BQ8IWT1 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC3.95□□□□□ -1.78
SCN4BQ8IWT1 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
SCN4BQ8IWT1 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.95□□□□□ -1.78
SCN4BQ8IWT1 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
SCN4BQ8IWT1 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
SCN4BQ8IWT1 USP8P1-201ENST00000494673 3183 ntBASIC3.95□□□□□ -1.78
SCN4BQ8IWT1 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.95□□□□□ -1.78
SCN4BQ8IWT1 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.95□□□□□ -1.78
SCN4BQ8IWT1 AC244517.1-201ENST00000606030 2086 ntBASIC3.94□□□□□ -1.78
SCN4BQ8IWT1 AC004925.1-201ENST00000624256 2706 ntBASIC3.94□□□□□ -1.78
SCN4BQ8IWT1 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC3.94□□□□□ -1.78
SCN4BQ8IWT1 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
SCN4BQ8IWT1 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC3.94□□□□□ -1.78
SCN4BQ8IWT1 Y_RNA.46-201ENST00000362695 102 ntBASIC3.94□□□□□ -1.78
SCN4BQ8IWT1 RNU6-1042P-201ENST00000384204 107 ntBASIC3.94□□□□□ -1.78
SCN4BQ8IWT1 RNU6-297P-201ENST00000384636 107 ntBASIC3.94□□□□□ -1.78
SCN4BQ8IWT1 RPL7P25-201ENST00000404151 721 ntBASIC3.94□□□□□ -1.78
SCN4BQ8IWT1 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.94□□□□□ -1.78
SCN4BQ8IWT1 RNA5SP104-201ENST00000410989 118 ntBASIC3.94□□□□□ -1.78
SCN4BQ8IWT1 RPS3AP3-201ENST00000411933 242 ntBASIC3.94□□□□□ -1.78
SCN4BQ8IWT1 JKAMPP1-201ENST00000413804 919 ntBASIC3.94□□□□□ -1.78
SCN4BQ8IWT1 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC3.94□□□□□ -1.78
SCN4BQ8IWT1 AC092447.6-201ENST00000414578 210 ntBASIC3.94□□□□□ -1.78
SCN4BQ8IWT1 RAD23BP2-201ENST00000416003 1207 ntBASIC3.94□□□□□ -1.78
SCN4BQ8IWT1 CYP4F29P-201ENST00000420685 446 ntBASIC3.94□□□□□ -1.78
SCN4BQ8IWT1 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC3.94□□□□□ -1.78
SCN4BQ8IWT1 RPL21P66-201ENST00000426566 466 ntBASIC3.94□□□□□ -1.78
SCN4BQ8IWT1 BX890604.2-201ENST00000427883 474 ntBASIC3.94□□□□□ -1.78
SCN4BQ8IWT1 NANOGP6-201ENST00000429190 847 ntBASIC3.94□□□□□ -1.78
SCN4BQ8IWT1 AC091286.1-201ENST00000431233 461 ntBASIC3.94□□□□□ -1.78
SCN4BQ8IWT1 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC3.94□□□□□ -1.78
SCN4BQ8IWT1 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC3.94□□□□□ -1.78
SCN4BQ8IWT1 AL353748.1-201ENST00000440753 474 ntBASIC3.94□□□□□ -1.78
SCN4BQ8IWT1 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC3.94□□□□□ -1.78
SCN4BQ8IWT1 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC3.94□□□□□ -1.78
SCN4BQ8IWT1 TPT1P7-201ENST00000458300 517 ntBASIC3.94□□□□□ -1.78
SCN4BQ8IWT1 SNORD121B-201ENST00000458838 81 ntBASIC3.94□□□□□ -1.78
SCN4BQ8IWT1 AC010285.1-201ENST00000470580 392 ntBASIC3.94□□□□□ -1.78
SCN4BQ8IWT1 RPL23AP55-201ENST00000498163 452 ntBASIC3.94□□□□□ -1.78
SCN4BQ8IWT1 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC3.94□□□□□ -1.78
SCN4BQ8IWT1 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
SCN4BQ8IWT1 CDC42P4-201ENST00000510507 563 ntBASIC3.94□□□□□ -1.78
SCN4BQ8IWT1 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.94□□□□□ -1.78
SCN4BQ8IWT1 RNU6-201P-201ENST00000517100 61 ntBASIC3.94□□□□□ -1.78
SCN4BQ8IWT1 SNORA31.20-201ENST00000517111 133 ntBASIC3.94□□□□□ -1.78
SCN4BQ8IWT1 AC026403.1-201ENST00000518938 295 ntBASIC3.94□□□□□ -1.78
SCN4BQ8IWT1 AP003497.1-201ENST00000528472 562 ntBASIC3.94□□□□□ -1.78
SCN4BQ8IWT1 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC3.94□□□□□ -1.78
SCN4BQ8IWT1 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC3.94□□□□□ -1.78
SCN4BQ8IWT1 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC3.94□□□□□ -1.78
SCN4BQ8IWT1 AC005951.1-201ENST00000576706 485 ntBASIC3.94□□□□□ -1.78
SCN4BQ8IWT1 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC3.94□□□□□ -1.78
SCN4BQ8IWT1 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC3.94□□□□□ -1.78
SCN4BQ8IWT1 AC009977.1-201ENST00000586015 570 ntBASIC3.94□□□□□ -1.78
SCN4BQ8IWT1 AC015871.2-201ENST00000603605 948 ntBASIC3.94□□□□□ -1.78
SCN4BQ8IWT1 AL136363.2-201ENST00000604173 851 ntBASIC3.94□□□□□ -1.78
SCN4BQ8IWT1 AL137849.1-201ENST00000604767 169 ntBASIC3.94□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 98.2 ms