Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 AC010608.3-201ENST00000625048 527 ntBASIC2.95□□□□□ -1.94
NIPAL3Q6P499 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
NIPAL3Q6P499 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC2.95□□□□□ -1.94
NIPAL3Q6P499 U6.105-201ENST00000637379 88 ntBASIC2.95□□□□□ -1.94
NIPAL3Q6P499 AC012321.1-201ENST00000561622 1588 ntBASIC2.95□□□□□ -1.94
NIPAL3Q6P499 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
NIPAL3Q6P499 Z83843.1-201ENST00000604070 3685 ntBASIC2.95□□□□□ -1.94
NIPAL3Q6P499 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
NIPAL3Q6P499 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC2.94□□□□□ -1.94
NIPAL3Q6P499 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC2.94□□□□□ -1.94
NIPAL3Q6P499 BCLAF1P1-201ENST00000505813 2752 ntBASIC2.94□□□□□ -1.94
NIPAL3Q6P499 AL161781.1-201ENST00000354277 403 ntBASIC2.94□□□□□ -1.94
NIPAL3Q6P499 U3.6-201ENST00000363622 211 ntBASIC2.94□□□□□ -1.94
NIPAL3Q6P499 RNU6-343P-201ENST00000364709 104 ntBASIC2.94□□□□□ -1.94
NIPAL3Q6P499 RNU6-76P-201ENST00000384060 104 ntBASIC2.94□□□□□ -1.94
NIPAL3Q6P499 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
NIPAL3Q6P499 SNORA11-201ENST00000408789 128 ntBASIC2.94□□□□□ -1.94
NIPAL3Q6P499 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC2.94□□□□□ -1.94
NIPAL3Q6P499 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC2.94□□□□□ -1.94
NIPAL3Q6P499 AC097713.2-201ENST00000430199 356 ntBASIC2.94□□□□□ -1.94
NIPAL3Q6P499 AC092573.2-201ENST00000434546 243 ntBASIC2.94□□□□□ -1.94
NIPAL3Q6P499 TRIM60P18-201ENST00000441518 828 ntBASIC2.94□□□□□ -1.94
NIPAL3Q6P499 ATP5C1P1-201ENST00000441945 895 ntBASIC2.94□□□□□ -1.94
NIPAL3Q6P499 AL031183.1-201ENST00000457667 207 ntBASIC2.94□□□□□ -1.94
NIPAL3Q6P499 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC2.94□□□□□ -1.94
NIPAL3Q6P499 AC008155.2-201ENST00000464337 397 ntBASIC2.94□□□□□ -1.94
NIPAL3Q6P499 WDR78-207ENST00000488333 613 ntTSL 3 BASIC2.94□□□□□ -1.94
NIPAL3Q6P499 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC2.94□□□□□ -1.94
NIPAL3Q6P499 AC119751.4-201ENST00000507498 357 ntBASIC2.94□□□□□ -1.94
NIPAL3Q6P499 AC006445.2-201ENST00000510061 472 ntBASIC2.94□□□□□ -1.94
NIPAL3Q6P499 AC116353.3-201ENST00000511215 249 ntBASIC2.94□□□□□ -1.94
NIPAL3Q6P499 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC2.94□□□□□ -1.94
NIPAL3Q6P499 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC2.94□□□□□ -1.94
NIPAL3Q6P499 RNU6-714P-201ENST00000516963 103 ntBASIC2.94□□□□□ -1.94
NIPAL3Q6P499 COX6CP8-201ENST00000522620 226 ntBASIC2.94□□□□□ -1.94
NIPAL3Q6P499 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC2.94□□□□□ -1.94
NIPAL3Q6P499 UBE2NP1-201ENST00000545592 458 ntBASIC2.94□□□□□ -1.94
NIPAL3Q6P499 AC125611.2-201ENST00000551907 647 ntBASIC2.94□□□□□ -1.94
NIPAL3Q6P499 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC2.94□□□□□ -1.94
NIPAL3Q6P499 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC2.94□□□□□ -1.94
NIPAL3Q6P499 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC2.94□□□□□ -1.94
NIPAL3Q6P499 AC005951.1-201ENST00000576706 485 ntBASIC2.94□□□□□ -1.94
NIPAL3Q6P499 ZNF415P1-201ENST00000582279 1166 ntBASIC2.94□□□□□ -1.94
NIPAL3Q6P499 HSPE1P7-201ENST00000604681 321 ntBASIC2.94□□□□□ -1.94
NIPAL3Q6P499 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC2.94□□□□□ -1.94
NIPAL3Q6P499 AC245297.2-201ENST00000610119 565 ntBASIC2.94□□□□□ -1.94
NIPAL3Q6P499 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC2.94□□□□□ -1.94
NIPAL3Q6P499 AC027309.3-201ENST00000623419 351 ntBASIC2.94□□□□□ -1.94
NIPAL3Q6P499 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
NIPAL3Q6P499 AC103988.1-201ENST00000566382 2177 ntBASIC2.94□□□□□ -1.94
NIPAL3Q6P499 AL049781.1-201ENST00000623195 3585 ntBASIC2.94□□□□□ -1.94
NIPAL3Q6P499 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC2.94□□□□□ -1.94
NIPAL3Q6P499 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
NIPAL3Q6P499 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC2.93□□□□□ -1.94
NIPAL3Q6P499 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
NIPAL3Q6P499 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC2.93□□□□□ -1.94
NIPAL3Q6P499 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC2.93□□□□□ -1.94
NIPAL3Q6P499 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC2.93□□□□□ -1.94
NIPAL3Q6P499 RNU6-97P-201ENST00000363387 104 ntBASIC2.93□□□□□ -1.94
NIPAL3Q6P499 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
NIPAL3Q6P499 RNA5SP171-201ENST00000391071 115 ntBASIC2.93□□□□□ -1.94
NIPAL3Q6P499 RNA5SP252-201ENST00000391131 119 ntBASIC2.93□□□□□ -1.94
NIPAL3Q6P499 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC2.93□□□□□ -1.94
NIPAL3Q6P499 AL389915.1-201ENST00000422463 466 ntBASIC2.93□□□□□ -1.94
NIPAL3Q6P499 AL953862.1-201ENST00000423016 168 ntBASIC2.93□□□□□ -1.94
NIPAL3Q6P499 AC092648.1-201ENST00000425870 423 ntBASIC2.93□□□□□ -1.94
NIPAL3Q6P499 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC2.93□□□□□ -1.94
NIPAL3Q6P499 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC2.93□□□□□ -1.94
NIPAL3Q6P499 AC090774.1-201ENST00000435925 246 ntBASIC2.93□□□□□ -1.94
NIPAL3Q6P499 MTND5P14-201ENST00000441481 1267 ntBASIC2.93□□□□□ -1.94
NIPAL3Q6P499 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC2.93□□□□□ -1.94
NIPAL3Q6P499 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC2.93□□□□□ -1.94
NIPAL3Q6P499 AL358232.1-201ENST00000448030 501 ntBASIC2.93□□□□□ -1.94
NIPAL3Q6P499 HSPE1P6-201ENST00000479457 291 ntBASIC2.93□□□□□ -1.94
NIPAL3Q6P499 AC021678.1-201ENST00000505195 936 ntBASIC2.93□□□□□ -1.94
NIPAL3Q6P499 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC2.93□□□□□ -1.94
NIPAL3Q6P499 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC2.93□□□□□ -1.94
NIPAL3Q6P499 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC2.93□□□□□ -1.94
NIPAL3Q6P499 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC2.93□□□□□ -1.94
NIPAL3Q6P499 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC2.93□□□□□ -1.94
NIPAL3Q6P499 RNU4-5P-201ENST00000607255 135 ntBASIC2.93□□□□□ -1.94
NIPAL3Q6P499 AC004067.1-201ENST00000608733 700 ntBASIC2.93□□□□□ -1.94
NIPAL3Q6P499 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC2.93□□□□□ -1.94
NIPAL3Q6P499 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC2.93□□□□□ -1.94
NIPAL3Q6P499 AP003122.6-201ENST00000623831 495 ntBASIC2.93□□□□□ -1.94
NIPAL3Q6P499 AC091903.1-201ENST00000624322 454 ntBASIC2.93□□□□□ -1.94
NIPAL3Q6P499 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
NIPAL3Q6P499 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC2.93□□□□□ -1.94
NIPAL3Q6P499 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC2.93□□□□□ -1.94
NIPAL3Q6P499 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC2.92□□□□□ -1.94
NIPAL3Q6P499 CD24P4-201ENST00000382840 243 ntBASIC2.92□□□□□ -1.94
NIPAL3Q6P499 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC2.92□□□□□ -1.94
NIPAL3Q6P499 RPS3AP25-201ENST00000411660 793 ntBASIC2.92□□□□□ -1.94
NIPAL3Q6P499 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC2.92□□□□□ -1.94
NIPAL3Q6P499 USP9YP33-201ENST00000412220 421 ntBASIC2.92□□□□□ -1.94
NIPAL3Q6P499 HMGN1P24-201ENST00000412282 298 ntBASIC2.92□□□□□ -1.94
NIPAL3Q6P499 TRIAP1P1-201ENST00000427062 225 ntBASIC2.92□□□□□ -1.94
NIPAL3Q6P499 OR2AS1P-201ENST00000427827 319 ntBASIC2.92□□□□□ -1.94
NIPAL3Q6P499 AL356867.1-201ENST00000429623 299 ntBASIC2.92□□□□□ -1.94
NIPAL3Q6P499 OR4K11P-201ENST00000431829 904 ntBASIC2.92□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 99.2 ms