Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
HSPG2P98160 ZNF720P1-201ENST00000562403 1939 ntBASIC1.11□□□□□ -2.23
HSPG2P98160 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC1.11□□□□□ -2.23
HSPG2P98160 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
HSPG2P98160 Y_RNA.30-201ENST00000362572 97 ntBASIC1.11□□□□□ -2.23
HSPG2P98160 RPL21P5-201ENST00000554662 472 ntBASIC1.11□□□□□ -2.23
HSPG2P98160 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC1.11□□□□□ -2.23
HSPG2P98160 AL356575.1-201ENST00000603008 283 ntBASIC1.11□□□□□ -2.23
HSPG2P98160 AC080078.3-201ENST00000605407 463 ntBASIC1.11□□□□□ -2.23
HSPG2P98160 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC1.11□□□□□ -2.23
HSPG2P98160 AC244517.1-201ENST00000606030 2086 ntBASIC1.11□□□□□ -2.23
HSPG2P98160 AL512283.1-201ENST00000606756 1384 ntBASIC1.11□□□□□ -2.23
HSPG2P98160 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC1.11□□□□□ -2.23
HSPG2P98160 RNU6-1027P-201ENST00000383998 107 ntBASIC1.11□□□□□ -2.23
HSPG2P98160 CALM1P2-201ENST00000452941 448 ntBASIC1.11□□□□□ -2.23
HSPG2P98160 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC1.11□□□□□ -2.23
HSPG2P98160 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC1.11□□□□□ -2.23
HSPG2P98160 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC1.11□□□□□ -2.23
HSPG2P98160 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC1.11□□□□□ -2.23
HSPG2P98160 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.11□□□□□ -2.23
HSPG2P98160 AC025048.6-202ENST00000627667 438 ntBASIC1.11□□□□□ -2.23
HSPG2P98160 AL592437.2-201ENST00000421655 2434 ntBASIC1.11□□□□□ -2.23
HSPG2P98160 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC1.11□□□□□ -2.23
HSPG2P98160 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC1.11□□□□□ -2.23
HSPG2P98160 RNA5SP338-201ENST00000410495 85 ntBASIC1.1□□□□□ -2.23
HSPG2P98160 MTCYBP7-201ENST00000419540 1134 ntBASIC1.1□□□□□ -2.23
HSPG2P98160 AC129850.1-201ENST00000436203 508 ntBASIC1.1□□□□□ -2.23
HSPG2P98160 PIGFP3-201ENST00000441918 722 ntBASIC1.1□□□□□ -2.23
HSPG2P98160 AP005660.1-201ENST00000522972 293 ntBASIC1.1□□□□□ -2.23
HSPG2P98160 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC1.1□□□□□ -2.23
HSPG2P98160 MIR4448-201ENST00000584360 86 ntBASIC1.1□□□□□ -2.23
HSPG2P98160 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC1.1□□□□□ -2.23
HSPG2P98160 BX649567.1-201ENST00000642071 1134 ntBASIC1.1□□□□□ -2.23
HSPG2P98160 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.1□□□□□ -2.23
HSPG2P98160 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC1.1□□□□□ -2.23
HSPG2P98160 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC1.1□□□□□ -2.23
HSPG2P98160 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC1.1□□□□□ -2.23
HSPG2P98160 AC121333.1-201ENST00000567488 2709 ntBASIC1.1□□□□□ -2.23
HSPG2P98160 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC1.1□□□□□ -2.23
HSPG2P98160 RNA5SP239-201ENST00000410218 129 ntBASIC1.1□□□□□ -2.23
HSPG2P98160 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC1.1□□□□□ -2.23
HSPG2P98160 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.1□□□□□ -2.23
HSPG2P98160 RNA5SP476-201ENST00000516613 103 ntBASIC1.1□□□□□ -2.23
HSPG2P98160 AC090819.1-201ENST00000523800 1111 ntBASIC1.1□□□□□ -2.23
HSPG2P98160 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC1.1□□□□□ -2.23
HSPG2P98160 AC092159.4-201ENST00000624944 550 ntBASIC1.1□□□□□ -2.23
HSPG2P98160 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC1.1□□□□□ -2.23
HSPG2P98160 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC1.1□□□□□ -2.23
HSPG2P98160 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC1.1□□□□□ -2.23
HSPG2P98160 SNRPFP4-201ENST00000456366 242 ntBASIC1.1□□□□□ -2.23
HSPG2P98160 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC1.1□□□□□ -2.23
HSPG2P98160 AC093331.1-201ENST00000521474 169 ntBASIC1.1□□□□□ -2.23
HSPG2P98160 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC1.1□□□□□ -2.23
HSPG2P98160 PTP4A1P6-201ENST00000531034 478 ntBASIC1.1□□□□□ -2.23
HSPG2P98160 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC1.1□□□□□ -2.23
HSPG2P98160 AC245036.5-201ENST00000596330 847 ntBASIC1.1□□□□□ -2.23
HSPG2P98160 AC103988.1-201ENST00000566382 2177 ntBASIC1.1□□□□□ -2.23
HSPG2P98160 RNU6-178P-201ENST00000384631 104 ntBASIC1.1□□□□□ -2.23
HSPG2P98160 AL138787.1-202ENST00000437804 898 ntBASIC1.1□□□□□ -2.23
HSPG2P98160 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC1.1□□□□□ -2.23
HSPG2P98160 GSTA11P-201ENST00000452866 669 ntBASIC1.1□□□□□ -2.23
HSPG2P98160 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC1.1□□□□□ -2.23
HSPG2P98160 AP000907.2-201ENST00000530827 353 ntBASIC1.1□□□□□ -2.23
HSPG2P98160 AC034268.2-201ENST00000571784 482 ntBASIC1.1□□□□□ -2.23
HSPG2P98160 AC013562.2-201ENST00000611632 603 ntBASIC1.1□□□□□ -2.23
HSPG2P98160 MTND5P12-201ENST00000502851 1449 ntBASIC1.1□□□□□ -2.23
HSPG2P98160 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC1.09□□□□□ -2.23
HSPG2P98160 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC1.09□□□□□ -2.23
HSPG2P98160 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.09□□□□□ -2.23
HSPG2P98160 MIR598-201ENST00000384868 97 ntBASIC1.09□□□□□ -2.23
HSPG2P98160 AL136133.1-201ENST00000413694 376 ntBASIC1.09□□□□□ -2.23
HSPG2P98160 TRIAP1P1-201ENST00000427062 225 ntBASIC1.09□□□□□ -2.23
HSPG2P98160 TRAV31-201ENST00000502780 342 ntBASIC1.09□□□□□ -2.23
HSPG2P98160 AP001804.3-201ENST00000525146 880 ntBASIC1.09□□□□□ -2.23
HSPG2P98160 AC009314.1-201ENST00000603871 304 ntBASIC1.09□□□□□ -2.23
HSPG2P98160 AC012531.5-201ENST00000611375 151 ntBASIC1.09□□□□□ -2.23
HSPG2P98160 OR4G1P-203ENST00000641984 1631 ntBASIC1.09□□□□□ -2.23
HSPG2P98160 RNU1-93P-201ENST00000364704 169 ntBASIC1.09□□□□□ -2.23
HSPG2P98160 RNA5SP38-201ENST00000410750 119 ntBASIC1.09□□□□□ -2.23
HSPG2P98160 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC1.09□□□□□ -2.23
HSPG2P98160 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC1.09□□□□□ -2.23
HSPG2P98160 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.09□□□□□ -2.23
HSPG2P98160 RPL23AP55-201ENST00000498163 452 ntBASIC1.09□□□□□ -2.23
HSPG2P98160 ATG10-AS1-201ENST00000504846 648 ntBASIC1.09□□□□□ -2.23
HSPG2P98160 ARL4AP2-201ENST00000507378 601 ntBASIC1.09□□□□□ -2.23
HSPG2P98160 AC107393.1-201ENST00000512403 346 ntBASIC1.09□□□□□ -2.23
HSPG2P98160 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC1.09□□□□□ -2.23
HSPG2P98160 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC1.09□□□□□ -2.23
HSPG2P98160 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC1.09□□□□□ -2.23
HSPG2P98160 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC1.09□□□□□ -2.23
HSPG2P98160 MIR6734-201ENST00000621166 68 ntBASIC1.09□□□□□ -2.23
HSPG2P98160 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.09□□□□□ -2.24
HSPG2P98160 MTND4P23-201ENST00000447723 1363 ntBASIC1.09□□□□□ -2.24
HSPG2P98160 AC023128.2-201ENST00000420880 1223 ntBASIC1.09□□□□□ -2.24
HSPG2P98160 RPL39P40-201ENST00000445481 146 ntBASIC1.09□□□□□ -2.24
HSPG2P98160 AC092989.1-201ENST00000481235 277 ntBASIC1.09□□□□□ -2.24
HSPG2P98160 AC079804.2-201ENST00000490376 200 ntBASIC1.09□□□□□ -2.24
HSPG2P98160 RN7SL274P-201ENST00000492268 272 ntBASIC1.09□□□□□ -2.24
HSPG2P98160 SNORA25.15-201ENST00000516487 89 ntBASIC1.09□□□□□ -2.24
HSPG2P98160 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC1.09□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 117.3 ms