Protein–RNA interactions for Protein: P53675

CLTCL1, Clathrin heavy chain 2, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1P53675 MIR502-201ENST00000606349 86 ntBASIC2.4□□□□□ -2.03
CLTCL1P53675 AC090617.7-201ENST00000623952 126 ntBASIC2.4□□□□□ -2.03
CLTCL1P53675 PSMD5-AS1-215ENST00000640622 205 ntBASIC2.4□□□□□ -2.03
CLTCL1P53675 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC2.4□□□□□ -2.03
CLTCL1P53675 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC2.39□□□□□ -2.03
CLTCL1P53675 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
CLTCL1P53675 SNORD48-201ENST00000364953 64 ntBASIC2.39□□□□□ -2.03
CLTCL1P53675 AP000275.1-201ENST00000411943 390 ntBASIC2.39□□□□□ -2.03
CLTCL1P53675 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.39□□□□□ -2.03
CLTCL1P53675 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC2.39□□□□□ -2.03
CLTCL1P53675 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC2.39□□□□□ -2.03
CLTCL1P53675 RPL23AP58-201ENST00000440453 469 ntBASIC2.39□□□□□ -2.03
CLTCL1P53675 MTCO1P42-201ENST00000457379 726 ntBASIC2.39□□□□□ -2.03
CLTCL1P53675 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC2.39□□□□□ -2.03
CLTCL1P53675 TRMT112P2-201ENST00000512910 132 ntBASIC2.39□□□□□ -2.03
CLTCL1P53675 RNU6-56P-201ENST00000516986 93 ntBASIC2.39□□□□□ -2.03
CLTCL1P53675 LINC02463-201ENST00000546414 497 ntTSL 3 BASIC2.39□□□□□ -2.03
CLTCL1P53675 AC007115.1-201ENST00000546853 234 ntBASIC2.39□□□□□ -2.03
CLTCL1P53675 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC2.39□□□□□ -2.03
CLTCL1P53675 AL035411.2-201ENST00000604022 421 ntBASIC2.39□□□□□ -2.03
CLTCL1P53675 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC2.39□□□□□ -2.03
CLTCL1P53675 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC2.39□□□□□ -2.03
CLTCL1P53675 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
CLTCL1P53675 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC2.39□□□□□ -2.03
CLTCL1P53675 AL138799.3-201ENST00000438968 350 ntBASIC2.39□□□□□ -2.03
CLTCL1P53675 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC2.39□□□□□ -2.03
CLTCL1P53675 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC2.39□□□□□ -2.03
CLTCL1P53675 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC2.39□□□□□ -2.03
CLTCL1P53675 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
CLTCL1P53675 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
CLTCL1P53675 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.38□□□□□ -2.03
CLTCL1P53675 Z98749.2-208ENST00000381646 500 ntBASIC2.38□□□□□ -2.03
CLTCL1P53675 OR7L1P-201ENST00000456181 380 ntBASIC2.38□□□□□ -2.03
CLTCL1P53675 AC090515.1-201ENST00000465295 476 ntBASIC2.38□□□□□ -2.03
CLTCL1P53675 AC112496.1-201ENST00000497961 562 ntTSL 5 BASIC2.38□□□□□ -2.03
CLTCL1P53675 HSPE1P20-201ENST00000538133 289 ntBASIC2.38□□□□□ -2.03
CLTCL1P53675 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC2.38□□□□□ -2.03
CLTCL1P53675 AC103987.3-201ENST00000582071 292 ntBASIC2.38□□□□□ -2.03
CLTCL1P53675 MIR3935-201ENST00000583472 104 ntBASIC2.38□□□□□ -2.03
CLTCL1P53675 AL110115.1-201ENST00000614396 364 ntBASIC2.38□□□□□ -2.03
CLTCL1P53675 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC2.38□□□□□ -2.03
CLTCL1P53675 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC2.37□□□□□ -2.03
CLTCL1P53675 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
CLTCL1P53675 TAS2R15P-201ENST00000390674 928 ntBASIC2.37□□□□□ -2.03
CLTCL1P53675 AC009965.2-201ENST00000425328 970 ntBASIC2.37□□□□□ -2.03
CLTCL1P53675 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC2.37□□□□□ -2.03
CLTCL1P53675 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC2.37□□□□□ -2.03
CLTCL1P53675 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC2.37□□□□□ -2.03
CLTCL1P53675 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC2.37□□□□□ -2.03
CLTCL1P53675 AC013444.2-201ENST00000603317 787 ntBASIC2.37□□□□□ -2.03
CLTCL1P53675 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC2.37□□□□□ -2.03
CLTCL1P53675 ZNF876P-202ENST00000398732 1485 ntBASIC2.37□□□□□ -2.03
CLTCL1P53675 RNU1-109P-201ENST00000383960 147 ntBASIC2.36□□□□□ -2.03
CLTCL1P53675 RPS7P9-201ENST00000414704 586 ntBASIC2.36□□□□□ -2.03
CLTCL1P53675 RPS15AP12-201ENST00000419498 388 ntBASIC2.36□□□□□ -2.03
CLTCL1P53675 SUMO1P4-201ENST00000429430 302 ntBASIC2.36□□□□□ -2.03
CLTCL1P53675 TPT1P14-201ENST00000448018 505 ntBASIC2.36□□□□□ -2.03
CLTCL1P53675 AC079203.1-201ENST00000487972 404 ntBASIC2.36□□□□□ -2.03
CLTCL1P53675 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC2.36□□□□□ -2.03
CLTCL1P53675 RNA5SP490-201ENST00000517141 136 ntBASIC2.36□□□□□ -2.03
CLTCL1P53675 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC2.36□□□□□ -2.03
CLTCL1P53675 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC2.36□□□□□ -2.03
CLTCL1P53675 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
CLTCL1P53675 AC090518.1-201ENST00000562300 1495 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
CLTCL1P53675 Y_RNA.224-201ENST00000364308 111 ntBASIC2.35□□□□□ -2.03
CLTCL1P53675 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
CLTCL1P53675 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC2.35□□□□□ -2.03
CLTCL1P53675 BX322784.1-201ENST00000455793 1077 ntBASIC2.35□□□□□ -2.03
CLTCL1P53675 AC092754.2-201ENST00000463506 460 ntBASIC2.35□□□□□ -2.03
CLTCL1P53675 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC2.35□□□□□ -2.03
CLTCL1P53675 RPL37P25-201ENST00000507308 276 ntBASIC2.35□□□□□ -2.03
CLTCL1P53675 AC091819.2-201ENST00000522292 490 ntTSL 3 BASIC2.35□□□□□ -2.03
CLTCL1P53675 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC2.35□□□□□ -2.03
CLTCL1P53675 AC121758.2-201ENST00000553271 193 ntBASIC2.35□□□□□ -2.03
CLTCL1P53675 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC2.35□□□□□ -2.03
CLTCL1P53675 DUXAP9-208ENST00000622815 614 ntBASIC2.35□□□□□ -2.03
CLTCL1P53675 AC090897.3-201ENST00000636973 1157 ntBASIC2.35□□□□□ -2.03
CLTCL1P53675 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC2.35□□□□□ -2.03
CLTCL1P53675 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.35□□□□□ -2.03
CLTCL1P53675 RNA5SP393-201ENST00000363423 117 ntBASIC2.35□□□□□ -2.03
CLTCL1P53675 SEC63P1-201ENST00000425785 1258 ntBASIC2.35□□□□□ -2.03
CLTCL1P53675 AC007375.1-201ENST00000554513 578 ntBASIC2.35□□□□□ -2.03
CLTCL1P53675 AP001542.2-201ENST00000593141 364 ntBASIC2.35□□□□□ -2.03
CLTCL1P53675 AC113368.1-201ENST00000603736 382 ntBASIC2.35□□□□□ -2.03
CLTCL1P53675 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
CLTCL1P53675 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
CLTCL1P53675 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
CLTCL1P53675 CUBN-201ENST00000377823 705 ntTSL 3 BASIC2.34□□□□□ -2.04
CLTCL1P53675 RNU4-52P-201ENST00000384209 138 ntBASIC2.34□□□□□ -2.04
CLTCL1P53675 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC2.34□□□□□ -2.04
CLTCL1P53675 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC2.34□□□□□ -2.04
CLTCL1P53675 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC2.34□□□□□ -2.04
CLTCL1P53675 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC2.34□□□□□ -2.04
CLTCL1P53675 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC2.34□□□□□ -2.04
CLTCL1P53675 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC2.33□□□□□ -2.04
CLTCL1P53675 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC2.33□□□□□ -2.04
CLTCL1P53675 AC005156.1-201ENST00000613371 573 ntBASIC2.33□□□□□ -2.04
CLTCL1P53675 AC027514.1-201ENST00000588561 1603 ntBASIC2.33□□□□□ -2.04
CLTCL1P53675 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
CLTCL1P53675 RNA5SP489-201ENST00000410986 109 ntBASIC2.32□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 96 ms