Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 AL353748.2-201ENST00000622148 471 ntBASIC2.86□□□□□ -1.95
RORAP35398 AP000720.1-201ENST00000625091 483 ntBASIC2.86□□□□□ -1.95
RORAP35398 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC2.86□□□□□ -1.95
RORAP35398 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC2.86□□□□□ -1.95
RORAP35398 MFSD8-245ENST00000641743 948 ntBASIC2.86□□□□□ -1.95
RORAP35398 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC2.86□□□□□ -1.95
RORAP35398 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
RORAP35398 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.86□□□□□ -1.95
RORAP35398 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC2.86□□□□□ -1.95
RORAP35398 AC092447.7-201ENST00000422212 1621 ntBASIC2.86□□□□□ -1.95
RORAP35398 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
RORAP35398 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC2.85□□□□□ -1.95
RORAP35398 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
RORAP35398 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
RORAP35398 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.85□□□□□ -1.95
RORAP35398 MTCO1P23-201ENST00000415223 1526 ntBASIC2.85□□□□□ -1.95
RORAP35398 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
RORAP35398 RNU6-173P-201ENST00000364215 104 ntBASIC2.85□□□□□ -1.95
RORAP35398 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC2.85□□□□□ -1.95
RORAP35398 RNA5SP274-201ENST00000410484 108 ntBASIC2.85□□□□□ -1.95
RORAP35398 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC2.85□□□□□ -1.95
RORAP35398 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC2.85□□□□□ -1.95
RORAP35398 AC012497.1-201ENST00000429392 575 ntBASIC2.85□□□□□ -1.95
RORAP35398 AC025750.2-201ENST00000442609 450 ntBASIC2.85□□□□□ -1.95
RORAP35398 MTCYBP42-201ENST00000444653 1130 ntBASIC2.85□□□□□ -1.95
RORAP35398 Z96811.1-201ENST00000445880 108 ntBASIC2.85□□□□□ -1.95
RORAP35398 AC079776.3-201ENST00000450665 370 ntBASIC2.85□□□□□ -1.95
RORAP35398 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC2.85□□□□□ -1.95
RORAP35398 AL049829.1-201ENST00000465411 156 ntBASIC2.85□□□□□ -1.95
RORAP35398 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC2.85□□□□□ -1.95
RORAP35398 KLRA1P-201ENST00000503499 986 ntBASIC2.85□□□□□ -1.95
RORAP35398 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
RORAP35398 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
RORAP35398 AC090136.1-201ENST00000520009 240 ntBASIC2.85□□□□□ -1.95
RORAP35398 AC027309.2-201ENST00000520566 192 ntBASIC2.85□□□□□ -1.95
RORAP35398 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC2.85□□□□□ -1.95
RORAP35398 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC2.85□□□□□ -1.95
RORAP35398 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC2.85□□□□□ -1.95
RORAP35398 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC2.85□□□□□ -1.95
RORAP35398 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC2.85□□□□□ -1.95
RORAP35398 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC2.85□□□□□ -1.95
RORAP35398 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC2.85□□□□□ -1.95
RORAP35398 AC091057.2-201ENST00000602594 792 ntBASIC2.85□□□□□ -1.95
RORAP35398 AC069234.5-201ENST00000611056 416 ntBASIC2.85□□□□□ -1.95
RORAP35398 MIR7106-201ENST00000612419 65 ntBASIC2.85□□□□□ -1.95
RORAP35398 AC091925.2-201ENST00000625059 256 ntBASIC2.85□□□□□ -1.95
RORAP35398 CYP3A51P-201ENST00000633513 256 ntBASIC2.85□□□□□ -1.95
RORAP35398 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
RORAP35398 MAPK10-266ENST00000641066 6555 ntBASIC2.85□□□□□ -1.95
RORAP35398 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC2.85□□□□□ -1.95
RORAP35398 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC2.85□□□□□ -1.95
RORAP35398 U3.6-201ENST00000363622 211 ntBASIC2.84□□□□□ -1.95
RORAP35398 RNU6-7-201ENST00000364784 107 ntBASIC2.84□□□□□ -1.95
RORAP35398 RNU6-8-201ENST00000365467 107 ntBASIC2.84□□□□□ -1.95
RORAP35398 RNU6-1300P-201ENST00000391046 108 ntBASIC2.84□□□□□ -1.95
RORAP35398 RNA5SP252-201ENST00000391131 119 ntBASIC2.84□□□□□ -1.95
RORAP35398 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC2.84□□□□□ -1.95
RORAP35398 MTCO1P56-201ENST00000401674 224 ntBASIC2.84□□□□□ -1.95
RORAP35398 CYCSP45-201ENST00000402289 315 ntBASIC2.84□□□□□ -1.95
RORAP35398 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
RORAP35398 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC2.84□□□□□ -1.95
RORAP35398 EEF1A1P41-201ENST00000414667 207 ntBASIC2.84□□□□□ -1.95
RORAP35398 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC2.84□□□□□ -1.95
RORAP35398 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC2.84□□□□□ -1.95
RORAP35398 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC2.84□□□□□ -1.95
RORAP35398 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
RORAP35398 AC109583.1-201ENST00000432156 268 ntBASIC2.84□□□□□ -1.95
RORAP35398 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC2.84□□□□□ -1.95
RORAP35398 snoU109.4-201ENST00000458953 143 ntBASIC2.84□□□□□ -1.95
RORAP35398 RN7SL75P-201ENST00000461926 281 ntBASIC2.84□□□□□ -1.95
RORAP35398 AC008427.1-201ENST00000503102 655 ntBASIC2.84□□□□□ -1.95
RORAP35398 AC009901.1-201ENST00000506703 541 ntBASIC2.84□□□□□ -1.95
RORAP35398 SUMO2P5-201ENST00000506790 245 ntBASIC2.84□□□□□ -1.95
RORAP35398 AC093752.1-206ENST00000511823 336 ntBASIC2.84□□□□□ -1.95
RORAP35398 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC2.84□□□□□ -1.95
RORAP35398 RNU6-1028P-201ENST00000517164 93 ntBASIC2.84□□□□□ -1.95
RORAP35398 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC2.84□□□□□ -1.95
RORAP35398 AC104986.1-201ENST00000517978 436 ntBASIC2.84□□□□□ -1.95
RORAP35398 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC2.84□□□□□ -1.95
RORAP35398 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC2.84□□□□□ -1.95
RORAP35398 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC2.84□□□□□ -1.95
RORAP35398 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC2.84□□□□□ -1.95
RORAP35398 MTCO3P13-201ENST00000577757 781 ntBASIC2.84□□□□□ -1.95
RORAP35398 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC2.84□□□□□ -1.95
RORAP35398 GLUD1P4-201ENST00000590914 418 ntBASIC2.84□□□□□ -1.95
RORAP35398 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC2.84□□□□□ -1.95
RORAP35398 AC010738.1-201ENST00000604970 987 ntBASIC2.84□□□□□ -1.95
RORAP35398 AC002064.3-201ENST00000623448 346 ntBASIC2.84□□□□□ -1.95
RORAP35398 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC2.84□□□□□ -1.95
RORAP35398 DLD-214ENST00000639772 421 ntTSL 5 BASIC2.84□□□□□ -1.95
RORAP35398 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.84□□□□□ -1.95
RORAP35398 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC2.84□□□□□ -1.96
RORAP35398 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
RORAP35398 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
RORAP35398 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
RORAP35398 SNORD56.5-201ENST00000364281 72 ntBASIC2.83□□□□□ -1.96
RORAP35398 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
RORAP35398 RPL21P75-201ENST00000396599 483 ntBASIC2.83□□□□□ -1.96
RORAP35398 RPL21P28-201ENST00000401418 483 ntBASIC2.83□□□□□ -1.96
RORAP35398 AL592114.1-201ENST00000403842 483 ntBASIC2.83□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 91.4 ms