Protein–RNA interactions for Protein: P08670

VIM, Vimentin, humanhuman

Known RBP Predictions only

Length 466 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VIMP08670 FAM60DP-201ENST00000524174 632 ntBASIC3.37□□□□□ -1.87
VIMP08670 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.37□□□□□ -1.87
VIMP08670 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC3.37□□□□□ -1.87
VIMP08670 AC023538.1-201ENST00000534576 736 ntBASIC3.37□□□□□ -1.87
VIMP08670 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC3.37□□□□□ -1.87
VIMP08670 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC3.37□□□□□ -1.87
VIMP08670 MIR5187-201ENST00000583479 76 ntBASIC3.37□□□□□ -1.87
VIMP08670 AC067852.3-201ENST00000589177 561 ntBASIC3.37□□□□□ -1.87
VIMP08670 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC3.37□□□□□ -1.87
VIMP08670 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC3.37□□□□□ -1.87
VIMP08670 MIR7851-201ENST00000610611 160 ntBASIC3.37□□□□□ -1.87
VIMP08670 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC3.37□□□□□ -1.87
VIMP08670 AL356596.1-201ENST00000624230 379 ntBASIC3.37□□□□□ -1.87
VIMP08670 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
VIMP08670 AC093831.2-201ENST00000624393 3427 ntBASIC3.37□□□□□ -1.87
VIMP08670 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
VIMP08670 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC3.37□□□□□ -1.87
VIMP08670 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC3.36□□□□□ -1.87
VIMP08670 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
VIMP08670 RNU6-1214P-201ENST00000363650 109 ntBASIC3.36□□□□□ -1.87
VIMP08670 MIR887-201ENST00000401258 79 ntBASIC3.36□□□□□ -1.87
VIMP08670 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC3.36□□□□□ -1.87
VIMP08670 RNA5SP317-201ENST00000410176 116 ntBASIC3.36□□□□□ -1.87
VIMP08670 RNA5SP311-201ENST00000411290 116 ntBASIC3.36□□□□□ -1.87
VIMP08670 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC3.36□□□□□ -1.87
VIMP08670 AL117339.2-201ENST00000430475 180 ntBASIC3.36□□□□□ -1.87
VIMP08670 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC3.36□□□□□ -1.87
VIMP08670 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC3.36□□□□□ -1.87
VIMP08670 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC3.36□□□□□ -1.87
VIMP08670 RN7SL75P-201ENST00000461926 281 ntBASIC3.36□□□□□ -1.87
VIMP08670 AP001025.2-201ENST00000490908 477 ntBASIC3.36□□□□□ -1.87
VIMP08670 AC093809.1-201ENST00000509155 340 ntBASIC3.36□□□□□ -1.87
VIMP08670 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC3.36□□□□□ -1.87
VIMP08670 RNA5SP315-201ENST00000516340 116 ntBASIC3.36□□□□□ -1.87
VIMP08670 RNA5SP312-201ENST00000517068 116 ntBASIC3.36□□□□□ -1.87
VIMP08670 RNU6-711P-201ENST00000517255 106 ntBASIC3.36□□□□□ -1.87
VIMP08670 AP001804.3-201ENST00000525146 880 ntBASIC3.36□□□□□ -1.87
VIMP08670 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.36□□□□□ -1.87
VIMP08670 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC3.36□□□□□ -1.87
VIMP08670 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC3.36□□□□□ -1.87
VIMP08670 AP005205.1-201ENST00000563503 508 ntBASIC3.36□□□□□ -1.87
VIMP08670 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.36□□□□□ -1.87
VIMP08670 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.36□□□□□ -1.87
VIMP08670 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC3.36□□□□□ -1.87
VIMP08670 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC3.36□□□□□ -1.87
VIMP08670 AC006539.2-201ENST00000601729 572 ntBASIC3.36□□□□□ -1.87
VIMP08670 AC024560.3-201ENST00000608482 349 ntBASIC3.36□□□□□ -1.87
VIMP08670 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
VIMP08670 AC008443.7-201ENST00000622195 246 ntBASIC3.36□□□□□ -1.87
VIMP08670 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC3.36□□□□□ -1.87
VIMP08670 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC3.36□□□□□ -1.87
VIMP08670 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC3.36□□□□□ -1.87
VIMP08670 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC3.36□□□□□ -1.87
VIMP08670 MAPK10-322ENST00000641485 4530 ntBASIC3.36□□□□□ -1.87
VIMP08670 PTER-201ENST00000298942 3448 ntTSL 5 BASIC3.36□□□□□ -1.87
VIMP08670 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC3.36□□□□□ -1.87
VIMP08670 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
VIMP08670 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
VIMP08670 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.35□□□□□ -1.87
VIMP08670 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
VIMP08670 RPL21P132-201ENST00000331267 462 ntBASIC3.35□□□□□ -1.87
VIMP08670 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
VIMP08670 RNU6-433P-201ENST00000363216 104 ntBASIC3.35□□□□□ -1.87
VIMP08670 RNU6-723P-201ENST00000383973 107 ntBASIC3.35□□□□□ -1.87
VIMP08670 MIR30B-201ENST00000384850 88 ntBASIC3.35□□□□□ -1.87
VIMP08670 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC3.35□□□□□ -1.87
VIMP08670 AL031121.1-201ENST00000406553 254 ntBASIC3.35□□□□□ -1.87
VIMP08670 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
VIMP08670 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC3.35□□□□□ -1.87
VIMP08670 BMS1P22-201ENST00000414726 313 ntBASIC3.35□□□□□ -1.87
VIMP08670 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC3.35□□□□□ -1.87
VIMP08670 AL022400.1-201ENST00000423946 935 ntBASIC3.35□□□□□ -1.87
VIMP08670 OR2AS1P-201ENST00000427827 319 ntBASIC3.35□□□□□ -1.87
VIMP08670 AC090774.1-201ENST00000435925 246 ntBASIC3.35□□□□□ -1.87
VIMP08670 CST9LP2-201ENST00000437612 320 ntBASIC3.35□□□□□ -1.87
VIMP08670 AC091862.1-201ENST00000438016 1100 ntBASIC3.35□□□□□ -1.87
VIMP08670 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC3.35□□□□□ -1.87
VIMP08670 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC3.35□□□□□ -1.87
VIMP08670 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC3.35□□□□□ -1.87
VIMP08670 MTND2P14-201ENST00000482139 351 ntBASIC3.35□□□□□ -1.87
VIMP08670 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC3.35□□□□□ -1.87
VIMP08670 SNORD59.2-201ENST00000516873 68 ntBASIC3.35□□□□□ -1.87
VIMP08670 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
VIMP08670 AC022690.1-201ENST00000526681 550 ntBASIC3.35□□□□□ -1.87
VIMP08670 AC007536.1-201ENST00000533382 349 ntBASIC3.35□□□□□ -1.87
VIMP08670 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC3.35□□□□□ -1.87
VIMP08670 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC3.35□□□□□ -1.87
VIMP08670 PARP1P2-201ENST00000556806 195 ntBASIC3.35□□□□□ -1.87
VIMP08670 AC055876.1-202ENST00000567053 138 ntBASIC3.35□□□□□ -1.87
VIMP08670 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC3.35□□□□□ -1.87
VIMP08670 AC087499.8-201ENST00000578406 226 ntBASIC3.35□□□□□ -1.87
VIMP08670 AC053481.4-201ENST00000583164 216 ntBASIC3.35□□□□□ -1.87
VIMP08670 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC3.35□□□□□ -1.87
VIMP08670 VN1R92P-201ENST00000598511 928 ntBASIC3.35□□□□□ -1.87
VIMP08670 AP002826.1-201ENST00000608835 315 ntBASIC3.35□□□□□ -1.87
VIMP08670 MIR6130-201ENST00000619419 109 ntBASIC3.35□□□□□ -1.87
VIMP08670 AL354798.1-201ENST00000622505 329 ntBASIC3.35□□□□□ -1.87
VIMP08670 AC007490.1-201ENST00000624321 703 ntBASIC3.35□□□□□ -1.87
VIMP08670 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC3.35□□□□□ -1.87
VIMP08670 AC084035.1-201ENST00000634543 607 ntBASIC3.35□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 85.4 ms