Protein–RNA interactions for Protein: O60902

SHOX2, Short stature homeobox protein 2, humanhuman

Predicted RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2O60902 NANOGNBP1-201ENST00000448444 480 ntBASIC2.61□□□□□ -1.99
SHOX2O60902 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
SHOX2O60902 RPS20P24-201ENST00000457473 361 ntBASIC2.61□□□□□ -1.99
SHOX2O60902 RPS4XP6-201ENST00000477670 797 ntBASIC2.61□□□□□ -1.99
SHOX2O60902 MTND3P24-201ENST00000506306 329 ntBASIC2.61□□□□□ -1.99
SHOX2O60902 RPL37P25-201ENST00000507308 276 ntBASIC2.61□□□□□ -1.99
SHOX2O60902 RNA5SP82-201ENST00000516707 92 ntBASIC2.61□□□□□ -1.99
SHOX2O60902 AP001804.3-201ENST00000525146 880 ntBASIC2.61□□□□□ -1.99
SHOX2O60902 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
SHOX2O60902 AC126177.3-201ENST00000551839 688 ntBASIC2.61□□□□□ -1.99
SHOX2O60902 AC078814.3-201ENST00000553036 491 ntBASIC2.61□□□□□ -1.99
SHOX2O60902 AC106734.1-201ENST00000568646 663 ntBASIC2.61□□□□□ -1.99
SHOX2O60902 MTATP6P25-201ENST00000574491 261 ntBASIC2.61□□□□□ -1.99
SHOX2O60902 BPTFP1-201ENST00000579209 492 ntBASIC2.61□□□□□ -1.99
SHOX2O60902 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC2.61□□□□□ -1.99
SHOX2O60902 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC2.61□□□□□ -1.99
SHOX2O60902 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC2.61□□□□□ -1.99
SHOX2O60902 AP001330.4-201ENST00000604350 154 ntBASIC2.61□□□□□ -1.99
SHOX2O60902 AC098679.5-201ENST00000624394 571 ntBASIC2.61□□□□□ -1.99
SHOX2O60902 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC2.61□□□□□ -1.99
SHOX2O60902 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC2.61□□□□□ -1.99
SHOX2O60902 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.6□□□□□ -1.99
SHOX2O60902 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC2.6□□□□□ -1.99
SHOX2O60902 RNU6-1074P-201ENST00000383995 104 ntBASIC2.6□□□□□ -1.99
SHOX2O60902 SNORA1.3-201ENST00000384676 136 ntBASIC2.6□□□□□ -1.99
SHOX2O60902 AL023807.1-201ENST00000407932 359 ntBASIC2.6□□□□□ -1.99
SHOX2O60902 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC2.6□□□□□ -1.99
SHOX2O60902 OR51A3P-201ENST00000413596 924 ntBASIC2.6□□□□□ -1.99
SHOX2O60902 AC009237.2-201ENST00000421358 284 ntBASIC2.6□□□□□ -1.99
SHOX2O60902 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC2.6□□□□□ -1.99
SHOX2O60902 RPS6P14-201ENST00000425165 719 ntBASIC2.6□□□□□ -1.99
SHOX2O60902 AL603825.1-201ENST00000438481 80 ntBASIC2.6□□□□□ -1.99
SHOX2O60902 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC2.6□□□□□ -1.99
SHOX2O60902 AC002542.1-201ENST00000440683 193 ntBASIC2.6□□□□□ -1.99
SHOX2O60902 OR51B8P-201ENST00000449892 769 ntBASIC2.6□□□□□ -1.99
SHOX2O60902 RNA5SP310-201ENST00000459084 116 ntBASIC2.6□□□□□ -1.99
SHOX2O60902 RPL30P14-201ENST00000482744 348 ntBASIC2.6□□□□□ -1.99
SHOX2O60902 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.6□□□□□ -1.99
SHOX2O60902 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC2.6□□□□□ -1.99
SHOX2O60902 RNU6-751P-201ENST00000516382 101 ntBASIC2.6□□□□□ -1.99
SHOX2O60902 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC2.6□□□□□ -1.99
SHOX2O60902 AC103783.1-201ENST00000520506 373 ntBASIC2.6□□□□□ -1.99
SHOX2O60902 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC2.6□□□□□ -1.99
SHOX2O60902 AADACP1-206ENST00000561502 1193 ntBASIC2.6□□□□□ -1.99
SHOX2O60902 AC245036.5-201ENST00000596330 847 ntBASIC2.6□□□□□ -1.99
SHOX2O60902 AC106791.2-201ENST00000604680 391 ntBASIC2.6□□□□□ -1.99
SHOX2O60902 AC104307.1-201ENST00000616142 196 ntBASIC2.6□□□□□ -1.99
SHOX2O60902 AL138880.2-201ENST00000616214 239 ntBASIC2.6□□□□□ -1.99
SHOX2O60902 RMST_10.1-201ENST00000616309 154 ntBASIC2.6□□□□□ -1.99
SHOX2O60902 AC006213.5-201ENST00000619673 288 ntBASIC2.6□□□□□ -1.99
SHOX2O60902 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC2.6□□□□□ -1.99
SHOX2O60902 AC111188.2-201ENST00000529697 1387 ntBASIC2.6□□□□□ -1.99
SHOX2O60902 ZNF720P1-201ENST00000562403 1939 ntBASIC2.6□□□□□ -1.99
SHOX2O60902 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
SHOX2O60902 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC2.59□□□□□ -1.99
SHOX2O60902 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC2.59□□□□□ -1.99
SHOX2O60902 AC080100.1-201ENST00000624239 5356 ntBASIC2.59□□□□□ -1.99
SHOX2O60902 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -1.99
SHOX2O60902 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
SHOX2O60902 SNORD56.4-201ENST00000363883 71 ntBASIC2.59□□□□□ -1.99
SHOX2O60902 SNORD56.5-201ENST00000364281 72 ntBASIC2.59□□□□□ -1.99
SHOX2O60902 RNU1-140P-201ENST00000365040 165 ntBASIC2.59□□□□□ -1.99
SHOX2O60902 RPS4XP3-201ENST00000398541 413 ntBASIC2.59□□□□□ -1.99
SHOX2O60902 ATF1P1-201ENST00000406040 927 ntBASIC2.59□□□□□ -1.99
SHOX2O60902 AL162578.1-201ENST00000406202 378 ntBASIC2.59□□□□□ -1.99
SHOX2O60902 BX682237.1-201ENST00000415016 335 ntBASIC2.59□□□□□ -1.99
SHOX2O60902 NPM1P11-201ENST00000417106 855 ntBASIC2.59□□□□□ -1.99
SHOX2O60902 AL590664.1-201ENST00000448065 339 ntBASIC2.59□□□□□ -1.99
SHOX2O60902 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC2.59□□□□□ -1.99
SHOX2O60902 AC015908.1-201ENST00000478739 476 ntBASIC2.59□□□□□ -1.99
SHOX2O60902 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC2.59□□□□□ -1.99
SHOX2O60902 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
SHOX2O60902 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
SHOX2O60902 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
SHOX2O60902 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
SHOX2O60902 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.59□□□□□ -1.99
SHOX2O60902 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC2.59□□□□□ -1.99
SHOX2O60902 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC2.59□□□□□ -1.99
SHOX2O60902 PSMA2P1-201ENST00000526365 646 ntBASIC2.59□□□□□ -1.99
SHOX2O60902 ZNF705CP-201ENST00000530515 889 ntBASIC2.59□□□□□ -1.99
SHOX2O60902 APAF1-207ENST00000547743 651 ntTSL 3 BASIC2.59□□□□□ -1.99
SHOX2O60902 AC007954.1-201ENST00000554198 494 ntBASIC2.59□□□□□ -1.99
SHOX2O60902 AC055876.5-201ENST00000605667 259 ntBASIC2.59□□□□□ -1.99
SHOX2O60902 AC093732.2-201ENST00000607950 274 ntBASIC2.59□□□□□ -1.99
SHOX2O60902 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC2.59□□□□□ -1.99
SHOX2O60902 AC132825.7-201ENST00000638744 335 ntBASIC2.59□□□□□ -1.99
SHOX2O60902 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
SHOX2O60902 TAB3P1-202ENST00000452645 1634 ntBASIC2.59□□□□□ -1.99
SHOX2O60902 MFSD8-213ENST00000641134 1327 ntBASIC2.59□□□□□ -2
SHOX2O60902 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC2.59□□□□□ -2
SHOX2O60902 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.58□□□□□ -2
SHOX2O60902 RNU5D-1-201ENST00000363299 116 ntBASIC2.58□□□□□ -2
SHOX2O60902 MDM4-202ENST00000367180 547 ntTSL 3 BASIC2.58□□□□□ -2
SHOX2O60902 TMSB4XP8-201ENST00000402089 135 ntBASIC2.58□□□□□ -2
SHOX2O60902 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC2.58□□□□□ -2
SHOX2O60902 STAT4-203ENST00000409995 709 ntTSL 5 BASIC2.58□□□□□ -2
SHOX2O60902 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC2.58□□□□□ -2
SHOX2O60902 AL133384.1-201ENST00000412744 351 ntBASIC2.58□□□□□ -2
SHOX2O60902 TMSB4XP6-201ENST00000415187 135 ntBASIC2.58□□□□□ -2
SHOX2O60902 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC2.58□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 114.6 ms