Protein–RNA interactions for Protein: O60716

CTNND1, Catenin delta-1, humanhuman

Known RBP Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1O60716 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
CTNND1O60716 RNA5SP239-201ENST00000410218 129 ntBASIC4.52□□□□□ -1.69
CTNND1O60716 MTND1P21-201ENST00000412991 285 ntBASIC4.52□□□□□ -1.69
CTNND1O60716 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC4.52□□□□□ -1.69
CTNND1O60716 SPA17P1-201ENST00000416656 452 ntBASIC4.52□□□□□ -1.69
CTNND1O60716 AC068533.1-201ENST00000418542 415 ntBASIC4.52□□□□□ -1.69
CTNND1O60716 OR1AA1P-201ENST00000419597 916 ntBASIC4.52□□□□□ -1.69
CTNND1O60716 AC092832.1-201ENST00000422934 400 ntBASIC4.52□□□□□ -1.69
CTNND1O60716 AC233728.2-201ENST00000425348 757 ntBASIC4.52□□□□□ -1.69
CTNND1O60716 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC4.52□□□□□ -1.69
CTNND1O60716 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC4.52□□□□□ -1.69
CTNND1O60716 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC4.52□□□□□ -1.69
CTNND1O60716 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC4.52□□□□□ -1.69
CTNND1O60716 AL049734.2-201ENST00000441066 616 ntBASIC4.52□□□□□ -1.69
CTNND1O60716 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CTNND1O60716 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC4.52□□□□□ -1.69
CTNND1O60716 TPT1P7-201ENST00000458300 517 ntBASIC4.52□□□□□ -1.69
CTNND1O60716 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC4.52□□□□□ -1.69
CTNND1O60716 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC4.52□□□□□ -1.69
CTNND1O60716 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CTNND1O60716 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC4.52□□□□□ -1.69
CTNND1O60716 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC4.52□□□□□ -1.69
CTNND1O60716 RN7SKP298-201ENST00000515950 94 ntBASIC4.52□□□□□ -1.69
CTNND1O60716 AP004371.1-201ENST00000525240 214 ntBASIC4.52□□□□□ -1.69
CTNND1O60716 AP003392.2-201ENST00000527269 208 ntBASIC4.52□□□□□ -1.69
CTNND1O60716 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CTNND1O60716 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC4.52□□□□□ -1.69
CTNND1O60716 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.52□□□□□ -1.69
CTNND1O60716 AC123904.2-201ENST00000548059 300 ntBASIC4.52□□□□□ -1.69
CTNND1O60716 OR4K8P-201ENST00000578842 1048 ntBASIC4.52□□□□□ -1.69
CTNND1O60716 MIR3682-201ENST00000581338 84 ntBASIC4.52□□□□□ -1.69
CTNND1O60716 HMGN1P30-201ENST00000589286 268 ntBASIC4.52□□□□□ -1.69
CTNND1O60716 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC4.52□□□□□ -1.69
CTNND1O60716 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC4.52□□□□□ -1.69
CTNND1O60716 AC121334.2-201ENST00000605387 271 ntBASIC4.52□□□□□ -1.69
CTNND1O60716 NDUFA8P1-201ENST00000605525 367 ntBASIC4.52□□□□□ -1.69
CTNND1O60716 AL589743.7-201ENST00000612637 233 ntBASIC4.52□□□□□ -1.69
CTNND1O60716 AL357559.1-201ENST00000622228 274 ntBASIC4.52□□□□□ -1.69
CTNND1O60716 MIR4727-201ENST00000622232 55 ntBASIC4.52□□□□□ -1.69
CTNND1O60716 ALG13-230ENST00000623189 458 ntTSL 3 BASIC4.52□□□□□ -1.69
CTNND1O60716 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
CTNND1O60716 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC4.52□□□□□ -1.69
CTNND1O60716 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.52□□□□□ -1.69
CTNND1O60716 AL365440.1-201ENST00000436135 2167 ntBASIC4.51□□□□□ -1.69
CTNND1O60716 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CTNND1O60716 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CTNND1O60716 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC4.51□□□□□ -1.69
CTNND1O60716 RNU6-1155P-201ENST00000363554 107 ntBASIC4.51□□□□□ -1.69
CTNND1O60716 RNU6-335P-201ENST00000364563 113 ntBASIC4.51□□□□□ -1.69
CTNND1O60716 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC4.51□□□□□ -1.69
CTNND1O60716 Y_RNA.517-201ENST00000384551 106 ntBASIC4.51□□□□□ -1.69
CTNND1O60716 MIR183-201ENST00000384958 110 ntBASIC4.51□□□□□ -1.69
CTNND1O60716 RPL17P50-201ENST00000396131 546 ntBASIC4.51□□□□□ -1.69
CTNND1O60716 HMGN1P24-201ENST00000412282 298 ntBASIC4.51□□□□□ -1.69
CTNND1O60716 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC4.51□□□□□ -1.69
CTNND1O60716 RPS29P4-201ENST00000414733 161 ntBASIC4.51□□□□□ -1.69
CTNND1O60716 RAD23BP2-201ENST00000416003 1207 ntBASIC4.51□□□□□ -1.69
CTNND1O60716 MTCO3P12-201ENST00000416718 547 ntBASIC4.51□□□□□ -1.69
CTNND1O60716 CCDC58P2-201ENST00000417131 366 ntBASIC4.51□□□□□ -1.69
CTNND1O60716 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC4.51□□□□□ -1.69
CTNND1O60716 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC4.51□□□□□ -1.69
CTNND1O60716 HSPD1P21-201ENST00000436541 245 ntBASIC4.51□□□□□ -1.69
CTNND1O60716 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC4.51□□□□□ -1.69
CTNND1O60716 CYCSP43-201ENST00000438233 310 ntBASIC4.51□□□□□ -1.69
CTNND1O60716 PRDX3P3-201ENST00000447765 522 ntBASIC4.51□□□□□ -1.69
CTNND1O60716 AC010655.1-201ENST00000449336 292 ntBASIC4.51□□□□□ -1.69
CTNND1O60716 RPL7P23-201ENST00000493874 747 ntBASIC4.51□□□□□ -1.69
CTNND1O60716 AC093278.1-201ENST00000494700 600 ntBASIC4.51□□□□□ -1.69
CTNND1O60716 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC4.51□□□□□ -1.69
CTNND1O60716 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC4.51□□□□□ -1.69
CTNND1O60716 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CTNND1O60716 CDC42P4-201ENST00000510507 563 ntBASIC4.51□□□□□ -1.69
CTNND1O60716 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC4.51□□□□□ -1.69
CTNND1O60716 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC4.51□□□□□ -1.69
CTNND1O60716 IGKV2-38-201ENST00000517443 247 ntBASIC4.51□□□□□ -1.69
CTNND1O60716 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC4.51□□□□□ -1.69
CTNND1O60716 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC4.51□□□□□ -1.69
CTNND1O60716 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC4.51□□□□□ -1.69
CTNND1O60716 AL356432.3-201ENST00000568952 465 ntBASIC4.51□□□□□ -1.69
CTNND1O60716 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC4.51□□□□□ -1.69
CTNND1O60716 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC4.51□□□□□ -1.69
CTNND1O60716 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC4.51□□□□□ -1.69
CTNND1O60716 AC091805.2-201ENST00000603848 235 ntBASIC4.51□□□□□ -1.69
CTNND1O60716 RNU1-30P-201ENST00000606575 163 ntBASIC4.51□□□□□ -1.69
CTNND1O60716 AL158211.4-201ENST00000606988 584 ntBASIC4.51□□□□□ -1.69
CTNND1O60716 AC103710.1-201ENST00000610003 901 ntBASIC4.51□□□□□ -1.69
CTNND1O60716 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC4.51□□□□□ -1.69
CTNND1O60716 AC008498.1-201ENST00000613012 531 ntBASIC4.51□□□□□ -1.69
CTNND1O60716 UBE2Q2P2-203ENST00000613592 761 ntBASIC4.51□□□□□ -1.69
CTNND1O60716 AC015540.1-201ENST00000615828 501 ntBASIC4.51□□□□□ -1.69
CTNND1O60716 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC4.51□□□□□ -1.69
CTNND1O60716 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC4.51□□□□□ -1.69
CTNND1O60716 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC4.51□□□□□ -1.69
CTNND1O60716 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CTNND1O60716 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CTNND1O60716 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CTNND1O60716 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.51□□□□□ -1.69
CTNND1O60716 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CTNND1O60716 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
CTNND1O60716 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 86.8 ms