Protein–RNA interactions for Protein: O15457

MSH4, MutS protein homolog 4, humanhuman

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4O15457 AL136164.4-201ENST00000625013 2135 ntBASIC3.07□□□□□ -1.92
MSH4O15457 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
MSH4O15457 RNU4-51P-201ENST00000364206 140 ntBASIC3.06□□□□□ -1.92
MSH4O15457 RNU6-878P-201ENST00000384578 110 ntBASIC3.06□□□□□ -1.92
MSH4O15457 SNORA48.8-201ENST00000391324 134 ntBASIC3.06□□□□□ -1.92
MSH4O15457 AL356057.3-201ENST00000402607 340 ntBASIC3.06□□□□□ -1.92
MSH4O15457 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.06□□□□□ -1.92
MSH4O15457 RNU2-52P-201ENST00000410680 190 ntBASIC3.06□□□□□ -1.92
MSH4O15457 AL161449.1-201ENST00000414531 1199 ntBASIC3.06□□□□□ -1.92
MSH4O15457 Z75741.2-201ENST00000417272 1167 ntBASIC3.06□□□□□ -1.92
MSH4O15457 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
MSH4O15457 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC3.06□□□□□ -1.92
MSH4O15457 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC3.06□□□□□ -1.92
MSH4O15457 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC3.06□□□□□ -1.92
MSH4O15457 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC3.06□□□□□ -1.92
MSH4O15457 MTND4LP10-201ENST00000435146 291 ntBASIC3.06□□□□□ -1.92
MSH4O15457 SNORD109B-201ENST00000458961 67 ntBASIC3.06□□□□□ -1.92
MSH4O15457 SNORD109A-201ENST00000459128 67 ntBASIC3.06□□□□□ -1.92
MSH4O15457 AC096751.1-202ENST00000502691 1067 ntBASIC3.06□□□□□ -1.92
MSH4O15457 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.06□□□□□ -1.92
MSH4O15457 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC3.06□□□□□ -1.92
MSH4O15457 MTCYBP16-201ENST00000509187 1129 ntBASIC3.06□□□□□ -1.92
MSH4O15457 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC3.06□□□□□ -1.92
MSH4O15457 RNA5SP468-201ENST00000516782 93 ntBASIC3.06□□□□□ -1.92
MSH4O15457 AC091163.3-201ENST00000518269 1144 ntBASIC3.06□□□□□ -1.92
MSH4O15457 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC3.06□□□□□ -1.92
MSH4O15457 AP000857.1-201ENST00000532151 543 ntBASIC3.06□□□□□ -1.92
MSH4O15457 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
MSH4O15457 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC3.06□□□□□ -1.92
MSH4O15457 HMGB1P6-201ENST00000569046 646 ntBASIC3.06□□□□□ -1.92
MSH4O15457 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.06□□□□□ -1.92
MSH4O15457 BNIP3P24-201ENST00000593398 557 ntBASIC3.06□□□□□ -1.92
MSH4O15457 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
MSH4O15457 RPL23AP92-201ENST00000603609 255 ntBASIC3.06□□□□□ -1.92
MSH4O15457 AC010738.1-201ENST00000604970 987 ntBASIC3.06□□□□□ -1.92
MSH4O15457 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC3.06□□□□□ -1.92
MSH4O15457 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC3.06□□□□□ -1.92
MSH4O15457 AC084824.4-201ENST00000620106 731 ntBASIC3.06□□□□□ -1.92
MSH4O15457 AL360181.4-201ENST00000621752 134 ntBASIC3.06□□□□□ -1.92
MSH4O15457 OR1S1-201ENST00000624470 978 ntBASIC3.06□□□□□ -1.92
MSH4O15457 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.06□□□□□ -1.92
MSH4O15457 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
MSH4O15457 FAM35BP-202ENST00000497389 3337 ntBASIC3.05□□□□□ -1.92
MSH4O15457 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC3.05□□□□□ -1.92
MSH4O15457 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
MSH4O15457 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC3.05□□□□□ -1.92
MSH4O15457 SNORD51-201ENST00000384320 80 ntBASIC3.05□□□□□ -1.92
MSH4O15457 MIR1289-1-201ENST00000408836 144 ntBASIC3.05□□□□□ -1.92
MSH4O15457 AC099677.1-201ENST00000420575 175 ntBASIC3.05□□□□□ -1.92
MSH4O15457 MRPS36P1-201ENST00000421291 307 ntBASIC3.05□□□□□ -1.92
MSH4O15457 AL139281.1-201ENST00000422120 335 ntBASIC3.05□□□□□ -1.92
MSH4O15457 PSMA6P3-201ENST00000428242 164 ntBASIC3.05□□□□□ -1.92
MSH4O15457 AC244505.4-201ENST00000434905 287 ntBASIC3.05□□□□□ -1.92
MSH4O15457 AC009969.1-201ENST00000438726 172 ntBASIC3.05□□□□□ -1.92
MSH4O15457 AC092427.1-201ENST00000439177 601 ntBASIC3.05□□□□□ -1.92
MSH4O15457 SSXP5-201ENST00000443473 287 ntBASIC3.05□□□□□ -1.92
MSH4O15457 AC108734.3-201ENST00000481241 1165 ntBASIC3.05□□□□□ -1.92
MSH4O15457 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC3.05□□□□□ -1.92
MSH4O15457 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC3.05□□□□□ -1.92
MSH4O15457 AC096571.1-202ENST00000506634 735 ntBASIC3.05□□□□□ -1.92
MSH4O15457 AC010625.1-201ENST00000511296 403 ntBASIC3.05□□□□□ -1.92
MSH4O15457 MEPE-206ENST00000511670 550 ntTSL 4 BASIC3.05□□□□□ -1.92
MSH4O15457 SNORA9.3-201ENST00000516383 129 ntBASIC3.05□□□□□ -1.92
MSH4O15457 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
MSH4O15457 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC3.05□□□□□ -1.92
MSH4O15457 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC3.05□□□□□ -1.92
MSH4O15457 AC024224.1-201ENST00000538284 609 ntBASIC3.05□□□□□ -1.92
MSH4O15457 AC010198.2-201ENST00000550612 259 ntBASIC3.05□□□□□ -1.92
MSH4O15457 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC3.05□□□□□ -1.92
MSH4O15457 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC3.05□□□□□ -1.92
MSH4O15457 TMF1P1-201ENST00000576058 373 ntBASIC3.05□□□□□ -1.92
MSH4O15457 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC3.05□□□□□ -1.92
MSH4O15457 AL158050.2-201ENST00000605336 568 ntBASIC3.05□□□□□ -1.92
MSH4O15457 VIS1.1-201ENST00000610517 203 ntBASIC3.05□□□□□ -1.92
MSH4O15457 DLEU2_6.1-201ENST00000610536 112 ntBASIC3.05□□□□□ -1.92
MSH4O15457 PART1_2.1-201ENST00000612397 250 ntBASIC3.05□□□□□ -1.92
MSH4O15457 AC073348.1-201ENST00000623002 331 ntBASIC3.05□□□□□ -1.92
MSH4O15457 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC3.05□□□□□ -1.92
MSH4O15457 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
MSH4O15457 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.05□□□□□ -1.92
MSH4O15457 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC3.05□□□□□ -1.92
MSH4O15457 AC008264.2-201ENST00000610193 3731 ntBASIC3.05□□□□□ -1.92
MSH4O15457 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC3.05□□□□□ -1.92
MSH4O15457 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
MSH4O15457 AC009487.2-201ENST00000420969 6821 ntBASIC3.04□□□□□ -1.92
MSH4O15457 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC3.04□□□□□ -1.92
MSH4O15457 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
MSH4O15457 RNU6-216P-201ENST00000363282 104 ntBASIC3.04□□□□□ -1.92
MSH4O15457 SNORA40.2-201ENST00000390847 128 ntBASIC3.04□□□□□ -1.92
MSH4O15457 AL450338.1-201ENST00000407987 512 ntBASIC3.04□□□□□ -1.92
MSH4O15457 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC3.04□□□□□ -1.92
MSH4O15457 NUP35P1-201ENST00000422734 947 ntBASIC3.04□□□□□ -1.92
MSH4O15457 AC012498.1-201ENST00000424037 437 ntBASIC3.04□□□□□ -1.92
MSH4O15457 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC3.04□□□□□ -1.92
MSH4O15457 AC236972.1-201ENST00000433225 199 ntBASIC3.04□□□□□ -1.92
MSH4O15457 ZNF736P1Y-201ENST00000440402 1276 ntBASIC3.04□□□□□ -1.92
MSH4O15457 RABEPKP1-201ENST00000440529 1026 ntBASIC3.04□□□□□ -1.92
MSH4O15457 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC3.04□□□□□ -1.92
MSH4O15457 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC3.04□□□□□ -1.92
MSH4O15457 MTCYBP11-201ENST00000447254 1109 ntBASIC3.04□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 119.2 ms