Protein–RNA interactions for Protein: O14627

CDX4, Homeobox protein CDX-4, humanhuman

Predicted RBP Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4O14627 NIPA2P2-201ENST00000496376 1083 ntBASIC3.02□□□□□ -1.93
CDX4O14627 AC010486.3-201ENST00000511602 785 ntBASIC3.02□□□□□ -1.93
CDX4O14627 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC3.02□□□□□ -1.93
CDX4O14627 RN7SKP31-201ENST00000516354 278 ntBASIC3.02□□□□□ -1.93
CDX4O14627 AC107934.2-201ENST00000518653 310 ntBASIC3.02□□□□□ -1.93
CDX4O14627 CA1-215ENST00000522389 551 ntTSL 3 BASIC3.02□□□□□ -1.93
CDX4O14627 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC3.02□□□□□ -1.93
CDX4O14627 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC3.02□□□□□ -1.93
CDX4O14627 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC3.02□□□□□ -1.93
CDX4O14627 AC107954.1-201ENST00000565906 727 ntBASIC3.02□□□□□ -1.93
CDX4O14627 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
CDX4O14627 AL354943.1-201ENST00000572103 781 ntBASIC3.02□□□□□ -1.93
CDX4O14627 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC3.02□□□□□ -1.93
CDX4O14627 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC3.02□□□□□ -1.93
CDX4O14627 MIR4435-1-201ENST00000582552 80 ntBASIC3.02□□□□□ -1.93
CDX4O14627 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
CDX4O14627 SNRPGP15-201ENST00000600149 222 ntBASIC3.02□□□□□ -1.93
CDX4O14627 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC3.02□□□□□ -1.93
CDX4O14627 AL133507.1-201ENST00000605269 557 ntBASIC3.02□□□□□ -1.93
CDX4O14627 AC107075.1-201ENST00000613695 314 ntBASIC3.02□□□□□ -1.93
CDX4O14627 AC073968.1-201ENST00000618594 637 ntBASIC3.02□□□□□ -1.93
CDX4O14627 AC131159.1-201ENST00000621854 213 ntBASIC3.02□□□□□ -1.93
CDX4O14627 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC3.02□□□□□ -1.93
CDX4O14627 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.02□□□□□ -1.93
CDX4O14627 CYP3A51P-201ENST00000633513 256 ntBASIC3.02□□□□□ -1.93
CDX4O14627 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
CDX4O14627 AC005539.1-201ENST00000443768 1479 ntBASIC3.02□□□□□ -1.93
CDX4O14627 AC066616.2-201ENST00000559334 1481 ntBASIC3.02□□□□□ -1.93
CDX4O14627 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
CDX4O14627 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
CDX4O14627 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC3.01□□□□□ -1.93
CDX4O14627 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.01□□□□□ -1.93
CDX4O14627 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC3.01□□□□□ -1.93
CDX4O14627 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.01□□□□□ -1.93
CDX4O14627 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC3.01□□□□□ -1.93
CDX4O14627 NCAPGP1-201ENST00000505112 1814 ntBASIC3.01□□□□□ -1.93
CDX4O14627 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
CDX4O14627 RNU6-600P-201ENST00000362524 99 ntBASIC3.01□□□□□ -1.93
CDX4O14627 Y_RNA.311-201ENST00000365068 96 ntBASIC3.01□□□□□ -1.93
CDX4O14627 NFIB-202ENST00000380924 840 ntTSL 5 BASIC3.01□□□□□ -1.93
CDX4O14627 RPL31P1-201ENST00000398116 372 ntBASIC3.01□□□□□ -1.93
CDX4O14627 SLC9B1P2-201ENST00000398120 1184 ntBASIC3.01□□□□□ -1.93
CDX4O14627 RPS4XP8-201ENST00000402039 771 ntBASIC3.01□□□□□ -1.93
CDX4O14627 HSPE1P26-201ENST00000405341 275 ntBASIC3.01□□□□□ -1.93
CDX4O14627 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC3.01□□□□□ -1.93
CDX4O14627 AC244098.2-201ENST00000422068 99 ntBASIC3.01□□□□□ -1.93
CDX4O14627 OFD1P12Y-201ENST00000427963 1207 ntBASIC3.01□□□□□ -1.93
CDX4O14627 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC3.01□□□□□ -1.93
CDX4O14627 OFD1P13Y-201ENST00000431179 1232 ntBASIC3.01□□□□□ -1.93
CDX4O14627 ATP5F1P1-201ENST00000433775 569 ntBASIC3.01□□□□□ -1.93
CDX4O14627 AL121890.1-201ENST00000435457 205 ntBASIC3.01□□□□□ -1.93
CDX4O14627 AL008629.1-201ENST00000438615 184 ntBASIC3.01□□□□□ -1.93
CDX4O14627 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC3.01□□□□□ -1.93
CDX4O14627 AL133217.1-201ENST00000450980 425 ntBASIC3.01□□□□□ -1.93
CDX4O14627 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC3.01□□□□□ -1.93
CDX4O14627 RPL21P134-201ENST00000453468 483 ntBASIC3.01□□□□□ -1.93
CDX4O14627 SNRPGP3-201ENST00000469405 227 ntBASIC3.01□□□□□ -1.93
CDX4O14627 RPS3AP22-201ENST00000488297 769 ntBASIC3.01□□□□□ -1.93
CDX4O14627 OR4G11P-201ENST00000492842 939 ntBASIC3.01□□□□□ -1.93
CDX4O14627 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC3.01□□□□□ -1.93
CDX4O14627 HMGB1P28-201ENST00000507778 552 ntBASIC3.01□□□□□ -1.93
CDX4O14627 AC105313.1-201ENST00000509121 353 ntBASIC3.01□□□□□ -1.93
CDX4O14627 HIGD1AP13-201ENST00000509878 289 ntBASIC3.01□□□□□ -1.93
CDX4O14627 AC079395.1-201ENST00000510981 262 ntBASIC3.01□□□□□ -1.93
CDX4O14627 AC116353.3-201ENST00000511215 249 ntBASIC3.01□□□□□ -1.93
CDX4O14627 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC3.01□□□□□ -1.93
CDX4O14627 USP9YP5-201ENST00000511770 630 ntBASIC3.01□□□□□ -1.93
CDX4O14627 AC026412.2-201ENST00000512270 1075 ntBASIC3.01□□□□□ -1.93
CDX4O14627 Y_RNA.688-201ENST00000516565 95 ntBASIC3.01□□□□□ -1.93
CDX4O14627 IGKV2D-36-201ENST00000518643 226 ntBASIC3.01□□□□□ -1.93
CDX4O14627 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC3.01□□□□□ -1.93
CDX4O14627 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
CDX4O14627 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC3.01□□□□□ -1.93
CDX4O14627 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.01□□□□□ -1.93
CDX4O14627 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.01□□□□□ -1.93
CDX4O14627 HMGB1P50-201ENST00000605814 607 ntBASIC3.01□□□□□ -1.93
CDX4O14627 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC3.01□□□□□ -1.93
CDX4O14627 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC3.01□□□□□ -1.93
CDX4O14627 AC012531.5-201ENST00000611375 151 ntBASIC3.01□□□□□ -1.93
CDX4O14627 AC048347.1-201ENST00000624621 427 ntBASIC3.01□□□□□ -1.93
CDX4O14627 AP003399.1-201ENST00000637534 361 ntBASIC3.01□□□□□ -1.93
CDX4O14627 MIR1322-201ENST00000638013 71 ntBASIC3.01□□□□□ -1.93
CDX4O14627 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC3.01□□□□□ -1.93
CDX4O14627 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
CDX4O14627 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC3.01□□□□□ -1.93
CDX4O14627 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
CDX4O14627 AL390862.1-201ENST00000635467 1469 ntBASIC3.01□□□□□ -1.93
CDX4O14627 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
CDX4O14627 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.01□□□□□ -1.93
CDX4O14627 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
CDX4O14627 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
CDX4O14627 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC3□□□□□ -1.93
CDX4O14627 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
CDX4O14627 FAM133CP-201ENST00000332869 704 ntBASIC3□□□□□ -1.93
CDX4O14627 Y_RNA.192-201ENST00000363977 102 ntBASIC3□□□□□ -1.93
CDX4O14627 SNORD82-201ENST00000365530 70 ntBASIC3□□□□□ -1.93
CDX4O14627 RNU6-730P-201ENST00000383954 104 ntBASIC3□□□□□ -1.93
CDX4O14627 Y_RNA.493-201ENST00000384422 102 ntBASIC3□□□□□ -1.93
CDX4O14627 MIR607-201ENST00000385241 96 ntBASIC3□□□□□ -1.93
CDX4O14627 SNORD67-201ENST00000390833 111 ntBASIC3□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 113.5 ms