Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 AC140076.1-201ENST00000449897 361 ntBASIC3.1□□□□□ -1.91
PDLIM1O00151 AP001992.1-205ENST00000462248 379 ntBASIC3.1□□□□□ -1.91
PDLIM1O00151 AC023424.2-201ENST00000493479 777 ntBASIC3.1□□□□□ -1.91
PDLIM1O00151 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC3.1□□□□□ -1.91
PDLIM1O00151 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC3.1□□□□□ -1.91
PDLIM1O00151 RNU6-826P-201ENST00000516827 104 ntBASIC3.1□□□□□ -1.91
PDLIM1O00151 AC053481.3-201ENST00000577881 843 ntBASIC3.1□□□□□ -1.91
PDLIM1O00151 U3.45-201ENST00000607547 219 ntBASIC3.1□□□□□ -1.91
PDLIM1O00151 AC007349.4-201ENST00000608114 532 ntBASIC3.1□□□□□ -1.91
PDLIM1O00151 MESTIT1_2.1-201ENST00000616328 235 ntBASIC3.1□□□□□ -1.91
PDLIM1O00151 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC3.1□□□□□ -1.91
PDLIM1O00151 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.1□□□□□ -1.91
PDLIM1O00151 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC3.1□□□□□ -1.91
PDLIM1O00151 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
PDLIM1O00151 AL645937.1-201ENST00000641739 1652 ntBASIC3.1□□□□□ -1.91
PDLIM1O00151 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.1□□□□□ -1.91
PDLIM1O00151 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
PDLIM1O00151 AC093010.3-201ENST00000570269 15214 ntBASIC3.1□□□□□ -1.91
PDLIM1O00151 AL356473.1-201ENST00000406203 1408 ntBASIC3.1□□□□□ -1.91
PDLIM1O00151 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC3.09□□□□□ -1.91
PDLIM1O00151 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
PDLIM1O00151 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.09□□□□□ -1.91
PDLIM1O00151 AC097714.1-201ENST00000511272 1647 ntBASIC3.09□□□□□ -1.91
PDLIM1O00151 AC006378.2-201ENST00000623178 2476 ntBASIC3.09□□□□□ -1.91
PDLIM1O00151 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
PDLIM1O00151 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
PDLIM1O00151 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC3.09□□□□□ -1.91
PDLIM1O00151 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC3.09□□□□□ -1.91
PDLIM1O00151 NFIB-202ENST00000380924 840 ntTSL 5 BASIC3.09□□□□□ -1.91
PDLIM1O00151 RNU6-1074P-201ENST00000383995 104 ntBASIC3.09□□□□□ -1.91
PDLIM1O00151 MIR218-2-201ENST00000385006 110 ntBASIC3.09□□□□□ -1.91
PDLIM1O00151 MIR513B-201ENST00000385136 84 ntBASIC3.09□□□□□ -1.91
PDLIM1O00151 CD3D-202ENST00000392884 476 ntTSL 2 BASIC3.09□□□□□ -1.91
PDLIM1O00151 AL031679.1-201ENST00000400616 525 ntBASIC3.09□□□□□ -1.91
PDLIM1O00151 RPS3AP25-201ENST00000411660 793 ntBASIC3.09□□□□□ -1.91
PDLIM1O00151 AC109780.2-201ENST00000413467 845 ntBASIC3.09□□□□□ -1.91
PDLIM1O00151 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
PDLIM1O00151 AC245052.5-201ENST00000416320 649 ntBASIC3.09□□□□□ -1.91
PDLIM1O00151 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC3.09□□□□□ -1.91
PDLIM1O00151 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.09□□□□□ -1.91
PDLIM1O00151 SNRPEP4-201ENST00000435815 279 ntBASIC3.09□□□□□ -1.91
PDLIM1O00151 Z80107.1-201ENST00000436830 412 ntBASIC3.09□□□□□ -1.91
PDLIM1O00151 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.09□□□□□ -1.91
PDLIM1O00151 MUPP-201ENST00000438111 566 ntBASIC3.09□□□□□ -1.91
PDLIM1O00151 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
PDLIM1O00151 MTND3P1-201ENST00000441336 220 ntBASIC3.09□□□□□ -1.91
PDLIM1O00151 FGF7P5-201ENST00000441829 291 ntBASIC3.09□□□□□ -1.91
PDLIM1O00151 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
PDLIM1O00151 AL358232.1-201ENST00000448030 501 ntBASIC3.09□□□□□ -1.91
PDLIM1O00151 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC3.09□□□□□ -1.91
PDLIM1O00151 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.09□□□□□ -1.91
PDLIM1O00151 AC097493.1-201ENST00000463958 372 ntBASIC3.09□□□□□ -1.91
PDLIM1O00151 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
PDLIM1O00151 RPL7P18-201ENST00000478965 734 ntBASIC3.09□□□□□ -1.91
PDLIM1O00151 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
PDLIM1O00151 AC091951.3-201ENST00000504093 246 ntBASIC3.09□□□□□ -1.91
PDLIM1O00151 AC020699.1-201ENST00000505161 445 ntBASIC3.09□□□□□ -1.91
PDLIM1O00151 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC3.09□□□□□ -1.91
PDLIM1O00151 AC010587.2-201ENST00000511727 448 ntBASIC3.09□□□□□ -1.91
PDLIM1O00151 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC3.09□□□□□ -1.91
PDLIM1O00151 SNORD59.2-201ENST00000516873 68 ntBASIC3.09□□□□□ -1.91
PDLIM1O00151 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC3.09□□□□□ -1.91
PDLIM1O00151 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC3.09□□□□□ -1.91
PDLIM1O00151 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC3.09□□□□□ -1.91
PDLIM1O00151 MIR5186-201ENST00000577504 120 ntBASIC3.09□□□□□ -1.91
PDLIM1O00151 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC3.09□□□□□ -1.91
PDLIM1O00151 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC3.09□□□□□ -1.91
PDLIM1O00151 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC3.09□□□□□ -1.91
PDLIM1O00151 VN1R78P-201ENST00000597393 564 ntBASIC3.09□□□□□ -1.91
PDLIM1O00151 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
PDLIM1O00151 AC068831.7-201ENST00000616954 363 ntBASIC3.09□□□□□ -1.91
PDLIM1O00151 AC015967.1-201ENST00000619893 476 ntBASIC3.09□□□□□ -1.91
PDLIM1O00151 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC3.09□□□□□ -1.91
PDLIM1O00151 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC3.09□□□□□ -1.91
PDLIM1O00151 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
PDLIM1O00151 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC3.09□□□□□ -1.92
PDLIM1O00151 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC3.08□□□□□ -1.92
PDLIM1O00151 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC3.08□□□□□ -1.92
PDLIM1O00151 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
PDLIM1O00151 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
PDLIM1O00151 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
PDLIM1O00151 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
PDLIM1O00151 RNU6-621P-201ENST00000364752 109 ntBASIC3.08□□□□□ -1.92
PDLIM1O00151 MIR183-201ENST00000384958 110 ntBASIC3.08□□□□□ -1.92
PDLIM1O00151 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.08□□□□□ -1.92
PDLIM1O00151 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
PDLIM1O00151 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC3.08□□□□□ -1.92
PDLIM1O00151 MOB4-205ENST00000409916 829 ntTSL 3 BASIC3.08□□□□□ -1.92
PDLIM1O00151 RNU2-47P-201ENST00000410649 186 ntBASIC3.08□□□□□ -1.92
PDLIM1O00151 USP9YP33-201ENST00000412220 421 ntBASIC3.08□□□□□ -1.92
PDLIM1O00151 ELOCP9-201ENST00000418624 239 ntBASIC3.08□□□□□ -1.92
PDLIM1O00151 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC3.08□□□□□ -1.92
PDLIM1O00151 MTCO2P5-201ENST00000422621 426 ntBASIC3.08□□□□□ -1.92
PDLIM1O00151 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC3.08□□□□□ -1.92
PDLIM1O00151 RPS25P9-201ENST00000435591 252 ntBASIC3.08□□□□□ -1.92
PDLIM1O00151 USP9YP35-201ENST00000435696 412 ntBASIC3.08□□□□□ -1.92
PDLIM1O00151 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC3.08□□□□□ -1.92
PDLIM1O00151 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC3.08□□□□□ -1.92
PDLIM1O00151 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC3.08□□□□□ -1.92
PDLIM1O00151 RN7SL293P-201ENST00000481765 281 ntBASIC3.08□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 126.1 ms