Protein–RNA interactions for Protein: A6NIU2

LINC01549, Putative uncharacterized protein encoded by LINC01549, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01549A6NIU2 AC009097.3-201ENST00000563557 1018 ntBASIC1.21□□□□□ -2.22
LINC01549A6NIU2 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC1.21□□□□□ -2.22
LINC01549A6NIU2 AL354943.1-201ENST00000572103 781 ntBASIC1.21□□□□□ -2.22
LINC01549A6NIU2 OR1M4P-201ENST00000589199 287 ntBASIC1.21□□□□□ -2.22
LINC01549A6NIU2 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC1.21□□□□□ -2.22
LINC01549A6NIU2 RPAP2P1-201ENST00000603626 1168 ntBASIC1.21□□□□□ -2.22
LINC01549A6NIU2 AC012557.1-201ENST00000607115 611 ntBASIC1.21□□□□□ -2.22
LINC01549A6NIU2 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.21□□□□□ -2.22
LINC01549A6NIU2 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC1.21□□□□□ -2.22
LINC01549A6NIU2 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC1.21□□□□□ -2.22
LINC01549A6NIU2 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC1.21□□□□□ -2.22
LINC01549A6NIU2 AC110079.1-202ENST00000635213 138 ntBASIC1.21□□□□□ -2.22
LINC01549A6NIU2 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC1.21□□□□□ -2.22
LINC01549A6NIU2 AC011460.1-201ENST00000636268 1834 ntBASIC1.21□□□□□ -2.22
LINC01549A6NIU2 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
LINC01549A6NIU2 IL33-202ENST00000417746 2327 ntTSL 2 BASIC1.2□□□□□ -2.22
LINC01549A6NIU2 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
LINC01549A6NIU2 GNG5P1-201ENST00000255500 204 ntBASIC1.2□□□□□ -2.22
LINC01549A6NIU2 RNU4-42P-201ENST00000364738 142 ntBASIC1.2□□□□□ -2.22
LINC01549A6NIU2 RN7SKP226-201ENST00000364912 300 ntBASIC1.2□□□□□ -2.22
LINC01549A6NIU2 POLHP1-201ENST00000411806 470 ntBASIC1.2□□□□□ -2.22
LINC01549A6NIU2 BX510359.4-201ENST00000423750 193 ntBASIC1.2□□□□□ -2.22
LINC01549A6NIU2 RPS26P30-201ENST00000443431 335 ntBASIC1.2□□□□□ -2.22
LINC01549A6NIU2 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC1.2□□□□□ -2.22
LINC01549A6NIU2 ANKRD30BP3-201ENST00000444850 1070 ntBASIC1.2□□□□□ -2.22
LINC01549A6NIU2 AL513343.1-201ENST00000451818 792 ntBASIC1.2□□□□□ -2.22
LINC01549A6NIU2 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC1.2□□□□□ -2.22
LINC01549A6NIU2 AC004924.1-201ENST00000480160 781 ntBASIC1.2□□□□□ -2.22
LINC01549A6NIU2 MTCO3P44-201ENST00000510977 541 ntBASIC1.2□□□□□ -2.22
LINC01549A6NIU2 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC1.2□□□□□ -2.22
LINC01549A6NIU2 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC1.2□□□□□ -2.22
LINC01549A6NIU2 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
LINC01549A6NIU2 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC1.2□□□□□ -2.22
LINC01549A6NIU2 AL109918.3-201ENST00000603072 338 ntBASIC1.2□□□□□ -2.22
LINC01549A6NIU2 AL136363.1-201ENST00000605349 337 ntBASIC1.2□□□□□ -2.22
LINC01549A6NIU2 AL359535.1-201ENST00000612100 1087 ntBASIC1.2□□□□□ -2.22
LINC01549A6NIU2 AC005332.10-201ENST00000612725 619 ntBASIC1.2□□□□□ -2.22
LINC01549A6NIU2 YWHAEP7-203ENST00000622054 312 ntBASIC1.2□□□□□ -2.22
LINC01549A6NIU2 AC020923.1-201ENST00000624021 917 ntBASIC1.2□□□□□ -2.22
LINC01549A6NIU2 BANCR-201ENST00000624238 473 ntTSL 2 BASIC1.2□□□□□ -2.22
LINC01549A6NIU2 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC1.2□□□□□ -2.22
LINC01549A6NIU2 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC1.2□□□□□ -2.22
LINC01549A6NIU2 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC1.2□□□□□ -2.22
LINC01549A6NIU2 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC1.2□□□□□ -2.22
LINC01549A6NIU2 RNU6-1181P-201ENST00000384191 106 ntBASIC1.19□□□□□ -2.22
LINC01549A6NIU2 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC1.19□□□□□ -2.22
LINC01549A6NIU2 TRBV24OR9-2-201ENST00000416632 435 ntBASIC1.19□□□□□ -2.22
LINC01549A6NIU2 AC006020.1-201ENST00000420179 1854 ntBASIC1.19□□□□□ -2.22
LINC01549A6NIU2 AC009237.2-201ENST00000421358 284 ntBASIC1.19□□□□□ -2.22
LINC01549A6NIU2 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC1.19□□□□□ -2.22
LINC01549A6NIU2 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC1.19□□□□□ -2.22
LINC01549A6NIU2 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
LINC01549A6NIU2 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC1.19□□□□□ -2.22
LINC01549A6NIU2 OSTCP8-201ENST00000445117 448 ntBASIC1.19□□□□□ -2.22
LINC01549A6NIU2 MORF4L1P4-201ENST00000450245 976 ntBASIC1.19□□□□□ -2.22
LINC01549A6NIU2 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC1.19□□□□□ -2.22
LINC01549A6NIU2 AC104685.1-201ENST00000502445 371 ntBASIC1.19□□□□□ -2.22
LINC01549A6NIU2 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC1.19□□□□□ -2.22
LINC01549A6NIU2 AC110792.2-201ENST00000510278 224 ntBASIC1.19□□□□□ -2.22
LINC01549A6NIU2 AC084851.1-201ENST00000529105 249 ntBASIC1.19□□□□□ -2.22
LINC01549A6NIU2 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC1.19□□□□□ -2.22
LINC01549A6NIU2 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC1.19□□□□□ -2.22
LINC01549A6NIU2 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC1.19□□□□□ -2.22
LINC01549A6NIU2 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC1.19□□□□□ -2.22
LINC01549A6NIU2 AC135628.1-201ENST00000568867 534 ntBASIC1.19□□□□□ -2.22
LINC01549A6NIU2 LARP7P3-201ENST00000579888 337 ntBASIC1.19□□□□□ -2.22
LINC01549A6NIU2 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC1.19□□□□□ -2.22
LINC01549A6NIU2 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC1.19□□□□□ -2.22
LINC01549A6NIU2 AL355297.2-201ENST00000604792 129 ntBASIC1.19□□□□□ -2.22
LINC01549A6NIU2 GMCL1P2-201ENST00000605230 823 ntBASIC1.19□□□□□ -2.22
LINC01549A6NIU2 AC113194.1-201ENST00000606037 500 ntBASIC1.19□□□□□ -2.22
LINC01549A6NIU2 OR5T1-202ENST00000641665 1471 ntAPPRIS P1 BASIC1.18□□□□□ -2.22
LINC01549A6NIU2 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC1.18□□□□□ -2.22
LINC01549A6NIU2 AC022826.2-201ENST00000358757 776 ntAPPRIS P1 TSL 4 BASIC1.18□□□□□ -2.22
LINC01549A6NIU2 U3.12-201ENST00000364498 214 ntBASIC1.18□□□□□ -2.22
LINC01549A6NIU2 OR1L1-202ENST00000373686 1083 ntBASIC1.18□□□□□ -2.22
LINC01549A6NIU2 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC1.18□□□□□ -2.22
LINC01549A6NIU2 RNA5SP80-201ENST00000410475 111 ntBASIC1.18□□□□□ -2.22
LINC01549A6NIU2 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC1.18□□□□□ -2.22
LINC01549A6NIU2 AC008173.1-201ENST00000418901 264 ntBASIC1.18□□□□□ -2.22
LINC01549A6NIU2 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC1.18□□□□□ -2.22
LINC01549A6NIU2 KRTAP19-11P-201ENST00000439851 104 ntBASIC1.18□□□□□ -2.22
LINC01549A6NIU2 RABEPKP1-201ENST00000440529 1026 ntBASIC1.18□□□□□ -2.22
LINC01549A6NIU2 ARL5AP2-201ENST00000444698 533 ntBASIC1.18□□□□□ -2.22
LINC01549A6NIU2 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC1.18□□□□□ -2.22
LINC01549A6NIU2 snoU13.22-201ENST00000459428 104 ntBASIC1.18□□□□□ -2.22
LINC01549A6NIU2 SETP11-201ENST00000473027 690 ntBASIC1.18□□□□□ -2.22
LINC01549A6NIU2 AC023790.1-201ENST00000482174 347 ntBASIC1.18□□□□□ -2.22
LINC01549A6NIU2 HMGB1P22-201ENST00000505315 124 ntBASIC1.18□□□□□ -2.22
LINC01549A6NIU2 BTF3P12-201ENST00000519620 469 ntBASIC1.18□□□□□ -2.22
LINC01549A6NIU2 MIR1254-2-201ENST00000579553 63 ntBASIC1.18□□□□□ -2.22
LINC01549A6NIU2 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC1.18□□□□□ -2.22
LINC01549A6NIU2 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC1.18□□□□□ -2.22
LINC01549A6NIU2 AL138880.2-201ENST00000616214 239 ntBASIC1.18□□□□□ -2.22
LINC01549A6NIU2 AC073592.7-201ENST00000623659 507 ntBASIC1.18□□□□□ -2.22
LINC01549A6NIU2 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC1.18□□□□□ -2.22
LINC01549A6NIU2 AC022031.1-201ENST00000585985 2593 ntBASIC1.18□□□□□ -2.22
LINC01549A6NIU2 ADAM3A-203ENST00000461344 2157 ntBASIC1.18□□□□□ -2.22
LINC01549A6NIU2 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
LINC01549A6NIU2 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 108.9 ms