Protein–RNA interactions for Protein: A0A0B4J266

TRAV41, T-cell receptor alpha variable 41 (Fragment), humanhuman

Predictions only

Length 112 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV41A0A0B4J266 CDC42P4-201ENST00000510507 563 ntBASIC2□□□□□ -2.09
TRAV41A0A0B4J266 C1GALT1P2-201ENST00000510813 1104 ntBASIC2□□□□□ -2.09
TRAV41A0A0B4J266 AC090136.1-201ENST00000520009 240 ntBASIC2□□□□□ -2.09
TRAV41A0A0B4J266 CKS1BP7-201ENST00000522230 235 ntBASIC2□□□□□ -2.09
TRAV41A0A0B4J266 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC2□□□□□ -2.09
TRAV41A0A0B4J266 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC2□□□□□ -2.09
TRAV41A0A0B4J266 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC2□□□□□ -2.09
TRAV41A0A0B4J266 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC2□□□□□ -2.09
TRAV41A0A0B4J266 MTATP6P25-201ENST00000574491 261 ntBASIC2□□□□□ -2.09
TRAV41A0A0B4J266 MIR4446-201ENST00000578505 67 ntBASIC2□□□□□ -2.09
TRAV41A0A0B4J266 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC2□□□□□ -2.09
TRAV41A0A0B4J266 AC006023.1-201ENST00000603944 259 ntBASIC2□□□□□ -2.09
TRAV41A0A0B4J266 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC2□□□□□ -2.09
TRAV41A0A0B4J266 AC006329.2-201ENST00000611491 394 ntBASIC2□□□□□ -2.09
TRAV41A0A0B4J266 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC2□□□□□ -2.09
TRAV41A0A0B4J266 BX649567.1-201ENST00000642071 1134 ntBASIC2□□□□□ -2.09
TRAV41A0A0B4J266 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2□□□□□ -2.09
TRAV41A0A0B4J266 AC008669.1-201ENST00000565823 2178 ntBASIC2□□□□□ -2.09
TRAV41A0A0B4J266 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2□□□□□ -2.09
TRAV41A0A0B4J266 AL136360.1-201ENST00000503377 1900 ntBASIC1.99□□□□□ -2.09
TRAV41A0A0B4J266 AC111188.2-201ENST00000529697 1387 ntBASIC1.99□□□□□ -2.09
TRAV41A0A0B4J266 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
TRAV41A0A0B4J266 AC130650.2-201ENST00000618736 2403 ntBASIC1.99□□□□□ -2.09
TRAV41A0A0B4J266 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
TRAV41A0A0B4J266 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
TRAV41A0A0B4J266 Y_RNA.510-201ENST00000384511 114 ntBASIC1.99□□□□□ -2.09
TRAV41A0A0B4J266 RNU6-883P-201ENST00000384597 107 ntBASIC1.99□□□□□ -2.09
TRAV41A0A0B4J266 MIR27B-201ENST00000385129 97 ntBASIC1.99□□□□□ -2.09
TRAV41A0A0B4J266 STAT4-203ENST00000409995 709 ntTSL 5 BASIC1.99□□□□□ -2.09
TRAV41A0A0B4J266 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC1.99□□□□□ -2.09
TRAV41A0A0B4J266 TRIM60P5Y-201ENST00000413946 574 ntBASIC1.99□□□□□ -2.09
TRAV41A0A0B4J266 AL445183.3-201ENST00000414168 502 ntBASIC1.99□□□□□ -2.09
TRAV41A0A0B4J266 TRBV24OR9-2-201ENST00000416632 435 ntBASIC1.99□□□□□ -2.09
TRAV41A0A0B4J266 MTCO1P39-201ENST00000426148 480 ntBASIC1.99□□□□□ -2.09
TRAV41A0A0B4J266 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC1.99□□□□□ -2.09
TRAV41A0A0B4J266 AC092427.1-202ENST00000430569 476 ntBASIC1.99□□□□□ -2.09
TRAV41A0A0B4J266 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC1.99□□□□□ -2.09
TRAV41A0A0B4J266 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC1.99□□□□□ -2.09
TRAV41A0A0B4J266 ZFAND6P1-201ENST00000434138 605 ntBASIC1.99□□□□□ -2.09
TRAV41A0A0B4J266 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC1.99□□□□□ -2.09
TRAV41A0A0B4J266 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC1.99□□□□□ -2.09
TRAV41A0A0B4J266 ST13P20-201ENST00000447996 1065 ntBASIC1.99□□□□□ -2.09
TRAV41A0A0B4J266 AC092798.1-201ENST00000458542 409 ntBASIC1.99□□□□□ -2.09
TRAV41A0A0B4J266 AC069306.1-201ENST00000507006 843 ntBASIC1.99□□□□□ -2.09
TRAV41A0A0B4J266 CBX3P3-201ENST00000508108 532 ntBASIC1.99□□□□□ -2.09
TRAV41A0A0B4J266 RN7SKP24-201ENST00000515888 284 ntBASIC1.99□□□□□ -2.09
TRAV41A0A0B4J266 RNU4ATAC17P-201ENST00000517272 120 ntBASIC1.99□□□□□ -2.09
TRAV41A0A0B4J266 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC1.99□□□□□ -2.09
TRAV41A0A0B4J266 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC1.99□□□□□ -2.09
TRAV41A0A0B4J266 AC087272.1-201ENST00000523624 533 ntBASIC1.99□□□□□ -2.09
TRAV41A0A0B4J266 AC123904.3-201ENST00000547218 814 ntBASIC1.99□□□□□ -2.09
TRAV41A0A0B4J266 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC1.99□□□□□ -2.09
TRAV41A0A0B4J266 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC1.99□□□□□ -2.09
TRAV41A0A0B4J266 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC1.99□□□□□ -2.09
TRAV41A0A0B4J266 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC1.99□□□□□ -2.09
TRAV41A0A0B4J266 AC104229.1-201ENST00000561364 255 ntBASIC1.99□□□□□ -2.09
TRAV41A0A0B4J266 AC023824.3-201ENST00000569003 562 ntBASIC1.99□□□□□ -2.09
TRAV41A0A0B4J266 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC1.99□□□□□ -2.09
TRAV41A0A0B4J266 RPL12P50-201ENST00000603116 116 ntBASIC1.99□□□□□ -2.09
TRAV41A0A0B4J266 AC012669.1-201ENST00000603209 283 ntBASIC1.99□□□□□ -2.09
TRAV41A0A0B4J266 MIR6817-201ENST00000615588 66 ntBASIC1.99□□□□□ -2.09
TRAV41A0A0B4J266 AC006213.5-201ENST00000619673 288 ntBASIC1.99□□□□□ -2.09
TRAV41A0A0B4J266 U4.3-201ENST00000621047 82 ntBASIC1.99□□□□□ -2.09
TRAV41A0A0B4J266 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC1.99□□□□□ -2.09
TRAV41A0A0B4J266 AC079228.1-201ENST00000624774 1049 ntBASIC1.99□□□□□ -2.09
TRAV41A0A0B4J266 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
TRAV41A0A0B4J266 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC1.99□□□□□ -2.09
TRAV41A0A0B4J266 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
TRAV41A0A0B4J266 MTCO1P6-201ENST00000481192 1384 ntBASIC1.98□□□□□ -2.09
TRAV41A0A0B4J266 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
TRAV41A0A0B4J266 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC1.98□□□□□ -2.09
TRAV41A0A0B4J266 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC1.98□□□□□ -2.09
TRAV41A0A0B4J266 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC1.98□□□□□ -2.09
TRAV41A0A0B4J266 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC1.98□□□□□ -2.09
TRAV41A0A0B4J266 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
TRAV41A0A0B4J266 Y_RNA.111-201ENST00000363248 100 ntBASIC1.98□□□□□ -2.09
TRAV41A0A0B4J266 SNORD56.4-201ENST00000363883 71 ntBASIC1.98□□□□□ -2.09
TRAV41A0A0B4J266 RNA5SP68-201ENST00000363885 119 ntBASIC1.98□□□□□ -2.09
TRAV41A0A0B4J266 AL031679.1-201ENST00000400616 525 ntBASIC1.98□□□□□ -2.09
TRAV41A0A0B4J266 AL136372.1-201ENST00000403060 228 ntBASIC1.98□□□□□ -2.09
TRAV41A0A0B4J266 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC1.98□□□□□ -2.09
TRAV41A0A0B4J266 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC1.98□□□□□ -2.09
TRAV41A0A0B4J266 RPL7P37-201ENST00000425095 738 ntBASIC1.98□□□□□ -2.09
TRAV41A0A0B4J266 EZH2P1-201ENST00000431167 291 ntBASIC1.98□□□□□ -2.09
TRAV41A0A0B4J266 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC1.98□□□□□ -2.09
TRAV41A0A0B4J266 MTND2P3-201ENST00000452458 470 ntBASIC1.98□□□□□ -2.09
TRAV41A0A0B4J266 AC027673.1-201ENST00000456245 405 ntBASIC1.98□□□□□ -2.09
TRAV41A0A0B4J266 RPL23AP45-201ENST00000476406 468 ntBASIC1.98□□□□□ -2.09
TRAV41A0A0B4J266 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC1.98□□□□□ -2.09
TRAV41A0A0B4J266 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC1.98□□□□□ -2.09
TRAV41A0A0B4J266 AC008716.1-201ENST00000511084 513 ntBASIC1.98□□□□□ -2.09
TRAV41A0A0B4J266 AC025881.1-201ENST00000518851 512 ntBASIC1.98□□□□□ -2.09
TRAV41A0A0B4J266 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC1.98□□□□□ -2.09
TRAV41A0A0B4J266 AC103783.1-201ENST00000520506 373 ntBASIC1.98□□□□□ -2.09
TRAV41A0A0B4J266 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC1.98□□□□□ -2.09
TRAV41A0A0B4J266 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
TRAV41A0A0B4J266 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC1.98□□□□□ -2.09
TRAV41A0A0B4J266 RPL23AP84-201ENST00000571193 464 ntBASIC1.98□□□□□ -2.09
TRAV41A0A0B4J266 MIR3162-201ENST00000581818 82 ntBASIC1.98□□□□□ -2.09
TRAV41A0A0B4J266 MIR3609-201ENST00000582661 80 ntBASIC1.98□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms