Protein–RNA interactions for Protein: Q9UQE7

SMC3, Structural maintenance of chromosomes protein 3, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3Q9UQE7 SNORA11-201ENST00000408789 128 ntBASIC3.33□□□□□ -1.88
SMC3Q9UQE7 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
SMC3Q9UQE7 LSM1P1-201ENST00000438629 273 ntBASIC3.33□□□□□ -1.88
SMC3Q9UQE7 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC3.33□□□□□ -1.88
SMC3Q9UQE7 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC3.33□□□□□ -1.88
SMC3Q9UQE7 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
SMC3Q9UQE7 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC3.33□□□□□ -1.88
SMC3Q9UQE7 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.33□□□□□ -1.88
SMC3Q9UQE7 AC084024.2-201ENST00000503480 791 ntBASIC3.33□□□□□ -1.88
SMC3Q9UQE7 DSTNP2-201ENST00000504533 515 ntBASIC3.33□□□□□ -1.88
SMC3Q9UQE7 MLLT10P2-201ENST00000506434 249 ntBASIC3.33□□□□□ -1.88
SMC3Q9UQE7 SEM1P1-201ENST00000506694 209 ntBASIC3.33□□□□□ -1.88
SMC3Q9UQE7 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.33□□□□□ -1.88
SMC3Q9UQE7 SCGB1D5P-201ENST00000515134 247 ntBASIC3.33□□□□□ -1.88
SMC3Q9UQE7 RNA5SP76-201ENST00000516277 87 ntBASIC3.33□□□□□ -1.88
SMC3Q9UQE7 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
SMC3Q9UQE7 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC3.33□□□□□ -1.88
SMC3Q9UQE7 HPRT1P3-201ENST00000539521 576 ntBASIC3.33□□□□□ -1.88
SMC3Q9UQE7 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC3.33□□□□□ -1.88
SMC3Q9UQE7 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC3.33□□□□□ -1.88
SMC3Q9UQE7 AC053481.3-201ENST00000577881 843 ntBASIC3.33□□□□□ -1.88
SMC3Q9UQE7 MIR4444-1-201ENST00000581696 74 ntBASIC3.33□□□□□ -1.88
SMC3Q9UQE7 MIR4444-2-201ENST00000584390 74 ntBASIC3.33□□□□□ -1.88
SMC3Q9UQE7 DNAJC19P3-201ENST00000594491 331 ntBASIC3.33□□□□□ -1.88
SMC3Q9UQE7 AL583856.2-201ENST00000606298 543 ntBASIC3.33□□□□□ -1.88
SMC3Q9UQE7 AL121652.1-201ENST00000608851 448 ntBASIC3.33□□□□□ -1.88
SMC3Q9UQE7 RNU6-1192P-201ENST00000612197 107 ntBASIC3.33□□□□□ -1.88
SMC3Q9UQE7 RNU6-489P-201ENST00000618289 107 ntBASIC3.33□□□□□ -1.88
SMC3Q9UQE7 AC244100.1-202ENST00000621554 382 ntBASIC3.33□□□□□ -1.88
SMC3Q9UQE7 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
SMC3Q9UQE7 OFD1P5Y-201ENST00000447585 2590 ntBASIC3.33□□□□□ -1.88
SMC3Q9UQE7 AC011460.1-201ENST00000636268 1834 ntBASIC3.33□□□□□ -1.88
SMC3Q9UQE7 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
SMC3Q9UQE7 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC3.32□□□□□ -1.88
SMC3Q9UQE7 RNU6-1257P-201ENST00000384625 110 ntBASIC3.32□□□□□ -1.88
SMC3Q9UQE7 MIR217-201ENST00000384817 110 ntBASIC3.32□□□□□ -1.88
SMC3Q9UQE7 MIR23B-201ENST00000384832 97 ntBASIC3.32□□□□□ -1.88
SMC3Q9UQE7 RNU2-25P-201ENST00000411041 191 ntBASIC3.32□□□□□ -1.88
SMC3Q9UQE7 AC096533.1-201ENST00000411645 353 ntBASIC3.32□□□□□ -1.88
SMC3Q9UQE7 RPS15AP38-201ENST00000413110 372 ntBASIC3.32□□□□□ -1.88
SMC3Q9UQE7 AL136133.1-201ENST00000413694 376 ntBASIC3.32□□□□□ -1.88
SMC3Q9UQE7 AL354692.1-201ENST00000423044 315 ntBASIC3.32□□□□□ -1.88
SMC3Q9UQE7 MTCO1P39-201ENST00000426148 480 ntBASIC3.32□□□□□ -1.88
SMC3Q9UQE7 Z93242.1-201ENST00000427102 353 ntBASIC3.32□□□□□ -1.88
SMC3Q9UQE7 BLOC1S2P1-201ENST00000428431 301 ntBASIC3.32□□□□□ -1.88
SMC3Q9UQE7 AC022018.1-201ENST00000430685 241 ntBASIC3.32□□□□□ -1.88
SMC3Q9UQE7 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.32□□□□□ -1.88
SMC3Q9UQE7 MTATP6P14-201ENST00000455189 673 ntBASIC3.32□□□□□ -1.88
SMC3Q9UQE7 AL031183.1-201ENST00000457667 207 ntBASIC3.32□□□□□ -1.88
SMC3Q9UQE7 AC003982.1-202ENST00000469928 248 ntBASIC3.32□□□□□ -1.88
SMC3Q9UQE7 AC104982.1-201ENST00000478775 574 ntBASIC3.32□□□□□ -1.88
SMC3Q9UQE7 AL358832.1-201ENST00000497800 389 ntBASIC3.32□□□□□ -1.88
SMC3Q9UQE7 BOLA3P3-201ENST00000505182 232 ntBASIC3.32□□□□□ -1.88
SMC3Q9UQE7 RNU6-27P-201ENST00000516146 107 ntBASIC3.32□□□□□ -1.88
SMC3Q9UQE7 AP001317.1-201ENST00000531194 960 ntBASIC3.32□□□□□ -1.88
SMC3Q9UQE7 AC087897.1-201ENST00000550134 156 ntBASIC3.32□□□□□ -1.88
SMC3Q9UQE7 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC3.32□□□□□ -1.88
SMC3Q9UQE7 AC122134.1-202ENST00000569111 1201 ntBASIC3.32□□□□□ -1.88
SMC3Q9UQE7 FAM60BP-201ENST00000578364 658 ntBASIC3.32□□□□□ -1.88
SMC3Q9UQE7 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC3.32□□□□□ -1.88
SMC3Q9UQE7 GLUD1P4-201ENST00000590914 418 ntBASIC3.32□□□□□ -1.88
SMC3Q9UQE7 AC010738.1-201ENST00000604970 987 ntBASIC3.32□□□□□ -1.88
SMC3Q9UQE7 AC005046.1-201ENST00000608515 625 ntBASIC3.32□□□□□ -1.88
SMC3Q9UQE7 AL359198.2-201ENST00000611836 194 ntBASIC3.32□□□□□ -1.88
SMC3Q9UQE7 AC006213.4-201ENST00000616184 634 ntBASIC3.32□□□□□ -1.88
SMC3Q9UQE7 AC084757.4-201ENST00000616350 526 ntBASIC3.32□□□□□ -1.88
SMC3Q9UQE7 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC3.32□□□□□ -1.88
SMC3Q9UQE7 AC010608.3-201ENST00000625048 527 ntBASIC3.32□□□□□ -1.88
SMC3Q9UQE7 AC026634.1-201ENST00000634369 198 ntBASIC3.32□□□□□ -1.88
SMC3Q9UQE7 AC087821.2-201ENST00000637086 450 ntBASIC3.32□□□□□ -1.88
SMC3Q9UQE7 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
SMC3Q9UQE7 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
SMC3Q9UQE7 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
SMC3Q9UQE7 ANKRD36P1-201ENST00000344424 659 ntBASIC3.31□□□□□ -1.88
SMC3Q9UQE7 RNU6-1066P-201ENST00000363573 105 ntBASIC3.31□□□□□ -1.88
SMC3Q9UQE7 MIR670-201ENST00000390142 98 ntBASIC3.31□□□□□ -1.88
SMC3Q9UQE7 RPS7P9-201ENST00000414704 586 ntBASIC3.31□□□□□ -1.88
SMC3Q9UQE7 C1DP1-201ENST00000426049 402 ntBASIC3.31□□□□□ -1.88
SMC3Q9UQE7 AC012497.1-201ENST00000429392 575 ntBASIC3.31□□□□□ -1.88
SMC3Q9UQE7 TRBV26OR9-2-201ENST00000432077 293 ntBASIC3.31□□□□□ -1.88
SMC3Q9UQE7 MTND4LP10-201ENST00000435146 291 ntBASIC3.31□□□□□ -1.88
SMC3Q9UQE7 PTGES3P1-201ENST00000439531 483 ntBASIC3.31□□□□□ -1.88
SMC3Q9UQE7 AC092393.1-201ENST00000439625 742 ntBASIC3.31□□□□□ -1.88
SMC3Q9UQE7 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.31□□□□□ -1.88
SMC3Q9UQE7 AC093156.1-201ENST00000440382 670 ntBASIC3.31□□□□□ -1.88
SMC3Q9UQE7 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC3.31□□□□□ -1.88
SMC3Q9UQE7 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC3.31□□□□□ -1.88
SMC3Q9UQE7 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC3.31□□□□□ -1.88
SMC3Q9UQE7 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC3.31□□□□□ -1.88
SMC3Q9UQE7 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC3.31□□□□□ -1.88
SMC3Q9UQE7 RNU6-1095P-201ENST00000516148 108 ntBASIC3.31□□□□□ -1.88
SMC3Q9UQE7 SNORA9.3-201ENST00000516383 129 ntBASIC3.31□□□□□ -1.88
SMC3Q9UQE7 MTCO3P15-201ENST00000526563 574 ntBASIC3.31□□□□□ -1.88
SMC3Q9UQE7 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC3.31□□□□□ -1.88
SMC3Q9UQE7 NDUFS5P6-201ENST00000529136 295 ntBASIC3.31□□□□□ -1.88
SMC3Q9UQE7 OR4P1P-201ENST00000530808 1136 ntBASIC3.31□□□□□ -1.88
SMC3Q9UQE7 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC3.31□□□□□ -1.88
SMC3Q9UQE7 AC128657.1-201ENST00000549459 145 ntBASIC3.31□□□□□ -1.88
SMC3Q9UQE7 MTCYBP27-201ENST00000555160 670 ntBASIC3.31□□□□□ -1.88
SMC3Q9UQE7 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC3.31□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms