Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 AL356274.1-201ENST00000617064 410 ntBASIC6.69□□□□□ -1.34
PDZRN3Q9UPQ7 MIR7641-1-201ENST00000627518 61 ntBASIC6.69□□□□□ -1.34
PDZRN3Q9UPQ7 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
PDZRN3Q9UPQ7 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC6.69□□□□□ -1.34
PDZRN3Q9UPQ7 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC6.69□□□□□ -1.34
PDZRN3Q9UPQ7 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC6.69□□□□□ -1.34
PDZRN3Q9UPQ7 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
PDZRN3Q9UPQ7 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
PDZRN3Q9UPQ7 AC009313.2-201ENST00000417893 1941 ntBASIC6.68□□□□□ -1.34
PDZRN3Q9UPQ7 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
PDZRN3Q9UPQ7 Y_RNA.2-201ENST00000362330 96 ntBASIC6.68□□□□□ -1.34
PDZRN3Q9UPQ7 Y_RNA.84-201ENST00000363011 104 ntBASIC6.68□□□□□ -1.34
PDZRN3Q9UPQ7 Y_RNA.314-201ENST00000365114 102 ntBASIC6.68□□□□□ -1.34
PDZRN3Q9UPQ7 RNU6-39P-201ENST00000384344 107 ntBASIC6.68□□□□□ -1.34
PDZRN3Q9UPQ7 RNU6-121P-201ENST00000410525 99 ntBASIC6.68□□□□□ -1.34
PDZRN3Q9UPQ7 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC6.68□□□□□ -1.34
PDZRN3Q9UPQ7 COX6B1P1-201ENST00000415962 213 ntBASIC6.68□□□□□ -1.34
PDZRN3Q9UPQ7 RPL21P112-201ENST00000434403 463 ntBASIC6.68□□□□□ -1.34
PDZRN3Q9UPQ7 RPL23AP22-201ENST00000437556 453 ntBASIC6.68□□□□□ -1.34
PDZRN3Q9UPQ7 HIGD1AP11-201ENST00000438361 280 ntBASIC6.68□□□□□ -1.34
PDZRN3Q9UPQ7 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC6.68□□□□□ -1.34
PDZRN3Q9UPQ7 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC6.68□□□□□ -1.34
PDZRN3Q9UPQ7 RPS29P33-201ENST00000456717 146 ntBASIC6.68□□□□□ -1.34
PDZRN3Q9UPQ7 AP000797.2-201ENST00000475768 606 ntBASIC6.68□□□□□ -1.34
PDZRN3Q9UPQ7 AC093267.1-201ENST00000489176 961 ntBASIC6.68□□□□□ -1.34
PDZRN3Q9UPQ7 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC6.68□□□□□ -1.34
PDZRN3Q9UPQ7 YWHAEP4-201ENST00000505390 198 ntBASIC6.68□□□□□ -1.34
PDZRN3Q9UPQ7 AC105758.1-201ENST00000506038 399 ntBASIC6.68□□□□□ -1.34
PDZRN3Q9UPQ7 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC6.68□□□□□ -1.34
PDZRN3Q9UPQ7 RNU1-54P-201ENST00000517181 120 ntBASIC6.68□□□□□ -1.34
PDZRN3Q9UPQ7 RAB9BP1-201ENST00000519581 626 ntBASIC6.68□□□□□ -1.34
PDZRN3Q9UPQ7 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC6.68□□□□□ -1.34
PDZRN3Q9UPQ7 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC6.68□□□□□ -1.34
PDZRN3Q9UPQ7 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC6.68□□□□□ -1.34
PDZRN3Q9UPQ7 AC004024.1-201ENST00000549244 247 ntBASIC6.68□□□□□ -1.34
PDZRN3Q9UPQ7 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC6.68□□□□□ -1.34
PDZRN3Q9UPQ7 AL359219.2-201ENST00000555184 348 ntBASIC6.68□□□□□ -1.34
PDZRN3Q9UPQ7 MIR3144-201ENST00000579460 79 ntBASIC6.68□□□□□ -1.34
PDZRN3Q9UPQ7 PRPF19P1-201ENST00000584766 898 ntBASIC6.68□□□□□ -1.34
PDZRN3Q9UPQ7 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC6.68□□□□□ -1.34
PDZRN3Q9UPQ7 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC6.68□□□□□ -1.34
PDZRN3Q9UPQ7 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
PDZRN3Q9UPQ7 OR6R2P-201ENST00000609216 300 ntBASIC6.68□□□□□ -1.34
PDZRN3Q9UPQ7 AC107021.2-201ENST00000567714 2095 ntBASIC6.68□□□□□ -1.34
PDZRN3Q9UPQ7 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
PDZRN3Q9UPQ7 AC006484.1-201ENST00000435086 1884 ntBASIC6.68□□□□□ -1.34
PDZRN3Q9UPQ7 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
PDZRN3Q9UPQ7 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC6.68□□□□□ -1.34
PDZRN3Q9UPQ7 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC6.67□□□□□ -1.34
PDZRN3Q9UPQ7 AC073136.1-201ENST00000449426 2884 ntBASIC6.67□□□□□ -1.34
PDZRN3Q9UPQ7 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC6.67□□□□□ -1.34
PDZRN3Q9UPQ7 THUMPD3P1-201ENST00000506556 1480 ntBASIC6.67□□□□□ -1.34
PDZRN3Q9UPQ7 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
PDZRN3Q9UPQ7 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC6.67□□□□□ -1.34
PDZRN3Q9UPQ7 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC6.67□□□□□ -1.34
PDZRN3Q9UPQ7 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC6.67□□□□□ -1.34
PDZRN3Q9UPQ7 AL391987.6-201ENST00000305671 199 ntBASIC6.67□□□□□ -1.34
PDZRN3Q9UPQ7 RNU6-858P-201ENST00000362436 107 ntBASIC6.67□□□□□ -1.34
PDZRN3Q9UPQ7 RNU6-1029P-201ENST00000384109 107 ntBASIC6.67□□□□□ -1.34
PDZRN3Q9UPQ7 HMGB1P17-201ENST00000403495 628 ntBASIC6.67□□□□□ -1.34
PDZRN3Q9UPQ7 COX5BP7-201ENST00000414780 274 ntBASIC6.67□□□□□ -1.34
PDZRN3Q9UPQ7 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC6.67□□□□□ -1.34
PDZRN3Q9UPQ7 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC6.67□□□□□ -1.34
PDZRN3Q9UPQ7 AC137499.1-201ENST00000427602 88 ntBASIC6.67□□□□□ -1.34
PDZRN3Q9UPQ7 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
PDZRN3Q9UPQ7 RPS20P32-201ENST00000456044 356 ntBASIC6.67□□□□□ -1.34
PDZRN3Q9UPQ7 RN7SL591P-201ENST00000496150 292 ntBASIC6.67□□□□□ -1.34
PDZRN3Q9UPQ7 SNORA31.6-201ENST00000516241 130 ntBASIC6.67□□□□□ -1.34
PDZRN3Q9UPQ7 RNA5SP170-201ENST00000517150 101 ntBASIC6.67□□□□□ -1.34
PDZRN3Q9UPQ7 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC6.67□□□□□ -1.34
PDZRN3Q9UPQ7 AC040958.1-201ENST00000561102 201 ntBASIC6.67□□□□□ -1.34
PDZRN3Q9UPQ7 SUB1P3-201ENST00000564581 315 ntBASIC6.67□□□□□ -1.34
PDZRN3Q9UPQ7 AC004584.2-201ENST00000570407 410 ntBASIC6.67□□□□□ -1.34
PDZRN3Q9UPQ7 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC6.67□□□□□ -1.34
PDZRN3Q9UPQ7 RN7SL356P-201ENST00000582228 248 ntBASIC6.67□□□□□ -1.34
PDZRN3Q9UPQ7 RN7SL52P-201ENST00000584271 284 ntBASIC6.67□□□□□ -1.34
PDZRN3Q9UPQ7 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC6.67□□□□□ -1.34
PDZRN3Q9UPQ7 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC6.67□□□□□ -1.34
PDZRN3Q9UPQ7 AC011494.1-201ENST00000596454 237 ntBASIC6.67□□□□□ -1.34
PDZRN3Q9UPQ7 AC073410.2-201ENST00000603240 332 ntBASIC6.67□□□□□ -1.34
PDZRN3Q9UPQ7 AC002044.1-201ENST00000606707 158 ntBASIC6.67□□□□□ -1.34
PDZRN3Q9UPQ7 RN7SL722P-201ENST00000617780 284 ntBASIC6.67□□□□□ -1.34
PDZRN3Q9UPQ7 RN7SL565P-201ENST00000618246 284 ntBASIC6.67□□□□□ -1.34
PDZRN3Q9UPQ7 MIR6839-201ENST00000620425 113 ntBASIC6.67□□□□□ -1.34
PDZRN3Q9UPQ7 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC6.67□□□□□ -1.34
PDZRN3Q9UPQ7 PRO1804-201ENST00000623780 2050 ntBASIC6.67□□□□□ -1.34
PDZRN3Q9UPQ7 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
PDZRN3Q9UPQ7 AL121839.2-201ENST00000565058 6943 ntBASIC6.66□□□□□ -1.34
PDZRN3Q9UPQ7 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
PDZRN3Q9UPQ7 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
PDZRN3Q9UPQ7 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
PDZRN3Q9UPQ7 RALGAPA1P1-201ENST00000443361 6232 ntBASIC6.66□□□□□ -1.34
PDZRN3Q9UPQ7 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
PDZRN3Q9UPQ7 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
PDZRN3Q9UPQ7 HSPE1P11-201ENST00000339579 310 ntBASIC6.66□□□□□ -1.34
PDZRN3Q9UPQ7 SNORA41-201ENST00000384675 132 ntBASIC6.66□□□□□ -1.34
PDZRN3Q9UPQ7 SNORA48.4-201ENST00000391089 134 ntBASIC6.66□□□□□ -1.34
PDZRN3Q9UPQ7 MIR450B-201ENST00000401182 78 ntBASIC6.66□□□□□ -1.34
PDZRN3Q9UPQ7 Y_RNA.597-201ENST00000410463 100 ntBASIC6.66□□□□□ -1.34
PDZRN3Q9UPQ7 RNU4-78P-201ENST00000410940 126 ntBASIC6.66□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms