Protein–RNA interactions for Protein: Q9ULL8

SHROOM4, Protein Shroom4, humanhuman

Predictions only

Length 1,493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4Q9ULL8 EEF1A1P41-201ENST00000414667 207 ntBASIC5.96□□□□□ -1.46
SHROOM4Q9ULL8 VDAC1P3-201ENST00000434069 851 ntBASIC5.96□□□□□ -1.46
SHROOM4Q9ULL8 USP9YP35-201ENST00000435696 412 ntBASIC5.96□□□□□ -1.46
SHROOM4Q9ULL8 FGF7P5-201ENST00000441829 291 ntBASIC5.96□□□□□ -1.46
SHROOM4Q9ULL8 MTND2P19-201ENST00000449129 1012 ntBASIC5.96□□□□□ -1.46
SHROOM4Q9ULL8 TRGVB-201ENST00000453257 471 ntBASIC5.96□□□□□ -1.46
SHROOM4Q9ULL8 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC5.96□□□□□ -1.46
SHROOM4Q9ULL8 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC5.96□□□□□ -1.46
SHROOM4Q9ULL8 DEFB131D-201ENST00000526803 184 ntBASIC5.96□□□□□ -1.46
SHROOM4Q9ULL8 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.46
SHROOM4Q9ULL8 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC5.96□□□□□ -1.46
SHROOM4Q9ULL8 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC5.96□□□□□ -1.46
SHROOM4Q9ULL8 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC5.96□□□□□ -1.46
SHROOM4Q9ULL8 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC5.96□□□□□ -1.46
SHROOM4Q9ULL8 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC5.96□□□□□ -1.46
SHROOM4Q9ULL8 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC5.96□□□□□ -1.46
SHROOM4Q9ULL8 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC5.95□□□□□ -1.46
SHROOM4Q9ULL8 AC017071.1-201ENST00000564407 2204 ntBASIC5.95□□□□□ -1.46
SHROOM4Q9ULL8 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC5.95□□□□□ -1.46
SHROOM4Q9ULL8 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC5.95□□□□□ -1.46
SHROOM4Q9ULL8 XGY1-201ENST00000381172 446 ntBASIC5.95□□□□□ -1.46
SHROOM4Q9ULL8 LAP3P1-201ENST00000403648 294 ntBASIC5.95□□□□□ -1.46
SHROOM4Q9ULL8 MIR1284-201ENST00000408337 120 ntBASIC5.95□□□□□ -1.46
SHROOM4Q9ULL8 RPL22P18-201ENST00000417197 377 ntBASIC5.95□□□□□ -1.46
SHROOM4Q9ULL8 AC019178.2-201ENST00000423595 505 ntBASIC5.95□□□□□ -1.46
SHROOM4Q9ULL8 MTCO2P17-201ENST00000424336 677 ntBASIC5.95□□□□□ -1.46
SHROOM4Q9ULL8 RPL21P66-201ENST00000426566 466 ntBASIC5.95□□□□□ -1.46
SHROOM4Q9ULL8 AL590233.1-201ENST00000430017 456 ntBASIC5.95□□□□□ -1.46
SHROOM4Q9ULL8 MTCO2P20-201ENST00000437339 673 ntBASIC5.95□□□□□ -1.46
SHROOM4Q9ULL8 ARPC3P5-201ENST00000448802 534 ntBASIC5.95□□□□□ -1.46
SHROOM4Q9ULL8 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC5.95□□□□□ -1.46
SHROOM4Q9ULL8 RPL23AP67-201ENST00000465341 474 ntBASIC5.95□□□□□ -1.46
SHROOM4Q9ULL8 HMGB1P25-201ENST00000468402 607 ntBASIC5.95□□□□□ -1.46
SHROOM4Q9ULL8 AC010587.2-201ENST00000511727 448 ntBASIC5.95□□□□□ -1.46
SHROOM4Q9ULL8 RNA5SP309-201ENST00000516670 106 ntBASIC5.95□□□□□ -1.46
SHROOM4Q9ULL8 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC5.95□□□□□ -1.46
SHROOM4Q9ULL8 AC023050.2-201ENST00000544968 387 ntBASIC5.95□□□□□ -1.46
SHROOM4Q9ULL8 AC087465.1-201ENST00000560574 245 ntBASIC5.95□□□□□ -1.46
SHROOM4Q9ULL8 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC5.95□□□□□ -1.46
SHROOM4Q9ULL8 AL139286.1-201ENST00000604465 483 ntBASIC5.95□□□□□ -1.46
SHROOM4Q9ULL8 AL158042.1-201ENST00000605338 460 ntBASIC5.95□□□□□ -1.46
SHROOM4Q9ULL8 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
SHROOM4Q9ULL8 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC5.94□□□□□ -1.46
SHROOM4Q9ULL8 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
SHROOM4Q9ULL8 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
SHROOM4Q9ULL8 CRP-202ENST00000368110 667 ntTSL 3 BASIC5.94□□□□□ -1.46
SHROOM4Q9ULL8 OFD1P11Y-201ENST00000418213 1177 ntBASIC5.94□□□□□ -1.46
SHROOM4Q9ULL8 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC5.94□□□□□ -1.46
SHROOM4Q9ULL8 RPS24P13-201ENST00000442520 397 ntBASIC5.94□□□□□ -1.46
SHROOM4Q9ULL8 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC5.94□□□□□ -1.46
SHROOM4Q9ULL8 AL445669.2-201ENST00000454425 421 ntBASIC5.94□□□□□ -1.46
SHROOM4Q9ULL8 HMGN2P7-201ENST00000456186 273 ntBASIC5.94□□□□□ -1.46
SHROOM4Q9ULL8 AC017037.2-201ENST00000513850 890 ntBASIC5.94□□□□□ -1.46
SHROOM4Q9ULL8 RNA5SP367-201ENST00000516557 118 ntBASIC5.94□□□□□ -1.46
SHROOM4Q9ULL8 AC009812.2-201ENST00000517657 457 ntBASIC5.94□□□□□ -1.46
SHROOM4Q9ULL8 AC126177.3-201ENST00000551839 688 ntBASIC5.94□□□□□ -1.46
SHROOM4Q9ULL8 AC007424.1-203ENST00000554613 687 ntBASIC5.94□□□□□ -1.46
SHROOM4Q9ULL8 AC009097.3-201ENST00000563557 1018 ntBASIC5.94□□□□□ -1.46
SHROOM4Q9ULL8 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC5.94□□□□□ -1.46
SHROOM4Q9ULL8 AC234772.3-201ENST00000602277 528 ntBASIC5.94□□□□□ -1.46
SHROOM4Q9ULL8 XIAPP1-201ENST00000603162 600 ntBASIC5.94□□□□□ -1.46
SHROOM4Q9ULL8 AC006023.2-201ENST00000609916 167 ntBASIC5.94□□□□□ -1.46
SHROOM4Q9ULL8 AC087241.4-201ENST00000612441 480 ntBASIC5.94□□□□□ -1.46
SHROOM4Q9ULL8 AC000403.1-201ENST00000613696 3585 ntBASIC5.94□□□□□ -1.46
SHROOM4Q9ULL8 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC5.93□□□□□ -1.46
SHROOM4Q9ULL8 AL031679.1-201ENST00000400616 525 ntBASIC5.93□□□□□ -1.46
SHROOM4Q9ULL8 RNU6-712P-201ENST00000410558 100 ntBASIC5.93□□□□□ -1.46
SHROOM4Q9ULL8 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC5.93□□□□□ -1.46
SHROOM4Q9ULL8 AL645937.1-202ENST00000421799 937 ntBASIC5.93□□□□□ -1.46
SHROOM4Q9ULL8 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC5.93□□□□□ -1.46
SHROOM4Q9ULL8 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC5.93□□□□□ -1.46
SHROOM4Q9ULL8 RPL37P4-201ENST00000448908 268 ntBASIC5.93□□□□□ -1.46
SHROOM4Q9ULL8 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
SHROOM4Q9ULL8 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC5.93□□□□□ -1.46
SHROOM4Q9ULL8 AC091951.3-201ENST00000504093 246 ntBASIC5.93□□□□□ -1.46
SHROOM4Q9ULL8 AC034244.1-201ENST00000507687 207 ntBASIC5.93□□□□□ -1.46
SHROOM4Q9ULL8 RNY4P37-201ENST00000516225 96 ntBASIC5.93□□□□□ -1.46
SHROOM4Q9ULL8 AC018630.1-201ENST00000541376 925 ntBASIC5.93□□□□□ -1.46
SHROOM4Q9ULL8 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC5.93□□□□□ -1.46
SHROOM4Q9ULL8 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC5.93□□□□□ -1.46
SHROOM4Q9ULL8 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC5.93□□□□□ -1.46
SHROOM4Q9ULL8 AC245297.2-201ENST00000610119 565 ntBASIC5.93□□□□□ -1.46
SHROOM4Q9ULL8 AC048347.1-201ENST00000624621 427 ntBASIC5.93□□□□□ -1.46
SHROOM4Q9ULL8 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC5.93□□□□□ -1.46
SHROOM4Q9ULL8 IDE-202ENST00000371581 4480 ntTSL 2 BASIC5.93□□□□□ -1.46
SHROOM4Q9ULL8 MTND5P24-201ENST00000438892 1767 ntBASIC5.92□□□□□ -1.46
SHROOM4Q9ULL8 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
SHROOM4Q9ULL8 AC073325.2-201ENST00000339545 159 ntBASIC5.92□□□□□ -1.46
SHROOM4Q9ULL8 RNU2-71P-201ENST00000411395 189 ntBASIC5.92□□□□□ -1.46
SHROOM4Q9ULL8 MTCO2P21-201ENST00000419780 677 ntBASIC5.92□□□□□ -1.46
SHROOM4Q9ULL8 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC5.92□□□□□ -1.46
SHROOM4Q9ULL8 AC099677.1-201ENST00000420575 175 ntBASIC5.92□□□□□ -1.46
SHROOM4Q9ULL8 AC019097.1-201ENST00000424783 735 ntBASIC5.92□□□□□ -1.46
SHROOM4Q9ULL8 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
SHROOM4Q9ULL8 AC005297.2-201ENST00000450430 606 ntBASIC5.92□□□□□ -1.46
SHROOM4Q9ULL8 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC5.92□□□□□ -1.46
SHROOM4Q9ULL8 RPL7P47-201ENST00000497299 556 ntBASIC5.92□□□□□ -1.46
SHROOM4Q9ULL8 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC5.92□□□□□ -1.46
SHROOM4Q9ULL8 RNU6-1073P-201ENST00000517182 106 ntBASIC5.92□□□□□ -1.46
SHROOM4Q9ULL8 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 98 ms