Protein–RNA interactions for Protein: Q9UBQ0

VPS29, Vacuolar protein sorting-associated protein 29, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29Q9UBQ0 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.29□□□□□ -2.04
VPS29Q9UBQ0 RNA5SP148-201ENST00000516527 94 ntBASIC2.29□□□□□ -2.04
VPS29Q9UBQ0 AC025281.1-201ENST00000567026 265 ntBASIC2.29□□□□□ -2.04
VPS29Q9UBQ0 MIR5194-201ENST00000582634 120 ntBASIC2.29□□□□□ -2.04
VPS29Q9UBQ0 AC012669.1-201ENST00000603209 283 ntBASIC2.29□□□□□ -2.04
VPS29Q9UBQ0 AC007621.1-201ENST00000604544 437 ntBASIC2.29□□□□□ -2.04
VPS29Q9UBQ0 AL353748.2-201ENST00000622148 471 ntBASIC2.29□□□□□ -2.04
VPS29Q9UBQ0 AC040168.1-201ENST00000623594 991 ntBASIC2.29□□□□□ -2.04
VPS29Q9UBQ0 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC2.29□□□□□ -2.04
VPS29Q9UBQ0 AC068880.5-201ENST00000624331 290 ntBASIC2.29□□□□□ -2.04
VPS29Q9UBQ0 AP003400.6-201ENST00000624698 740 ntBASIC2.29□□□□□ -2.04
VPS29Q9UBQ0 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC2.29□□□□□ -2.04
VPS29Q9UBQ0 AC083865.1-201ENST00000636634 831 ntBASIC2.29□□□□□ -2.04
VPS29Q9UBQ0 AC016717.2-201ENST00000609089 5141 ntBASIC2.29□□□□□ -2.04
VPS29Q9UBQ0 ZNF90P1-201ENST00000480493 1951 ntBASIC2.29□□□□□ -2.04
VPS29Q9UBQ0 IL6ST-204ENST00000381293 612 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
VPS29Q9UBQ0 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
VPS29Q9UBQ0 ATP5F1P6-201ENST00000402768 767 ntBASIC2.28□□□□□ -2.04
VPS29Q9UBQ0 EIF4EBP2P3-201ENST00000403144 334 ntBASIC2.28□□□□□ -2.04
VPS29Q9UBQ0 AC129850.1-201ENST00000436203 508 ntBASIC2.28□□□□□ -2.04
VPS29Q9UBQ0 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
VPS29Q9UBQ0 DNAJC19P8-201ENST00000452887 259 ntBASIC2.28□□□□□ -2.04
VPS29Q9UBQ0 RPS3P1-201ENST00000456781 192 ntBASIC2.28□□□□□ -2.04
VPS29Q9UBQ0 CDC42P4-201ENST00000510507 563 ntBASIC2.28□□□□□ -2.04
VPS29Q9UBQ0 AC026436.1-201ENST00000510537 270 ntBASIC2.28□□□□□ -2.04
VPS29Q9UBQ0 AC010625.1-201ENST00000511296 403 ntBASIC2.28□□□□□ -2.04
VPS29Q9UBQ0 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC2.28□□□□□ -2.04
VPS29Q9UBQ0 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC2.28□□□□□ -2.04
VPS29Q9UBQ0 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC2.28□□□□□ -2.04
VPS29Q9UBQ0 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.28□□□□□ -2.04
VPS29Q9UBQ0 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.28□□□□□ -2.04
VPS29Q9UBQ0 AC025016.1-201ENST00000616746 682 ntBASIC2.28□□□□□ -2.04
VPS29Q9UBQ0 AP003485.2-201ENST00000623636 610 ntBASIC2.28□□□□□ -2.04
VPS29Q9UBQ0 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.28□□□□□ -2.04
VPS29Q9UBQ0 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.28□□□□□ -2.04
VPS29Q9UBQ0 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
VPS29Q9UBQ0 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.27□□□□□ -2.05
VPS29Q9UBQ0 MTND5P31-201ENST00000419366 1374 ntBASIC2.27□□□□□ -2.05
VPS29Q9UBQ0 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC2.27□□□□□ -2.05
VPS29Q9UBQ0 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
VPS29Q9UBQ0 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
VPS29Q9UBQ0 RNU1-51P-201ENST00000365345 176 ntBASIC2.27□□□□□ -2.05
VPS29Q9UBQ0 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC2.27□□□□□ -2.05
VPS29Q9UBQ0 RNU6-921P-201ENST00000384361 107 ntBASIC2.27□□□□□ -2.05
VPS29Q9UBQ0 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC2.27□□□□□ -2.05
VPS29Q9UBQ0 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC2.27□□□□□ -2.05
VPS29Q9UBQ0 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.27□□□□□ -2.05
VPS29Q9UBQ0 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC2.27□□□□□ -2.05
VPS29Q9UBQ0 PAICSP7-201ENST00000419829 962 ntBASIC2.27□□□□□ -2.05
VPS29Q9UBQ0 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC2.27□□□□□ -2.05
VPS29Q9UBQ0 AC099677.4-201ENST00000446786 380 ntTSL 3 BASIC2.27□□□□□ -2.05
VPS29Q9UBQ0 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
VPS29Q9UBQ0 AC073901.1-201ENST00000462471 408 ntBASIC2.27□□□□□ -2.05
VPS29Q9UBQ0 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC2.27□□□□□ -2.05
VPS29Q9UBQ0 RPL23AP70-201ENST00000483361 460 ntBASIC2.27□□□□□ -2.05
VPS29Q9UBQ0 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC2.27□□□□□ -2.05
VPS29Q9UBQ0 RNU4-29P-201ENST00000515943 174 ntBASIC2.27□□□□□ -2.05
VPS29Q9UBQ0 RNU6-760P-201ENST00000516078 97 ntBASIC2.27□□□□□ -2.05
VPS29Q9UBQ0 RPL7P20-201ENST00000520308 745 ntBASIC2.27□□□□□ -2.05
VPS29Q9UBQ0 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC2.27□□□□□ -2.05
VPS29Q9UBQ0 HIGD1AP6-201ENST00000521833 279 ntBASIC2.27□□□□□ -2.05
VPS29Q9UBQ0 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC2.27□□□□□ -2.05
VPS29Q9UBQ0 OR4R2P-201ENST00000530815 597 ntBASIC2.27□□□□□ -2.05
VPS29Q9UBQ0 OR8K4P-201ENST00000534608 872 ntBASIC2.27□□□□□ -2.05
VPS29Q9UBQ0 MGST1-215ENST00000540056 546 ntTSL 3 BASIC2.27□□□□□ -2.05
VPS29Q9UBQ0 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
VPS29Q9UBQ0 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC2.27□□□□□ -2.05
VPS29Q9UBQ0 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
VPS29Q9UBQ0 AC074050.1-201ENST00000563247 211 ntBASIC2.27□□□□□ -2.05
VPS29Q9UBQ0 AC009163.5-201ENST00000575421 637 ntBASIC2.27□□□□□ -2.05
VPS29Q9UBQ0 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC2.27□□□□□ -2.05
VPS29Q9UBQ0 MIR4446-201ENST00000578505 67 ntBASIC2.27□□□□□ -2.05
VPS29Q9UBQ0 AC090616.3-201ENST00000582184 217 ntBASIC2.27□□□□□ -2.05
VPS29Q9UBQ0 MIR3609-201ENST00000582661 80 ntBASIC2.27□□□□□ -2.05
VPS29Q9UBQ0 TPMTP1-201ENST00000592307 737 ntBASIC2.27□□□□□ -2.05
VPS29Q9UBQ0 AC016542.1-201ENST00000608259 493 ntBASIC2.27□□□□□ -2.05
VPS29Q9UBQ0 AC087359.1-201ENST00000508335 1740 ntBASIC2.27□□□□□ -2.05
VPS29Q9UBQ0 AC135776.4-201ENST00000624300 1904 ntBASIC2.27□□□□□ -2.05
VPS29Q9UBQ0 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC2.26□□□□□ -2.05
VPS29Q9UBQ0 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
VPS29Q9UBQ0 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
VPS29Q9UBQ0 SET-203ENST00000372688 801 ntTSL 2 BASIC2.26□□□□□ -2.05
VPS29Q9UBQ0 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
VPS29Q9UBQ0 MIR649-201ENST00000384843 97 ntBASIC2.26□□□□□ -2.05
VPS29Q9UBQ0 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC2.26□□□□□ -2.05
VPS29Q9UBQ0 MTCO1P39-201ENST00000426148 480 ntBASIC2.26□□□□□ -2.05
VPS29Q9UBQ0 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC2.26□□□□□ -2.05
VPS29Q9UBQ0 NDUFB4P6-201ENST00000436819 366 ntBASIC2.26□□□□□ -2.05
VPS29Q9UBQ0 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC2.26□□□□□ -2.05
VPS29Q9UBQ0 HMGN3P1-201ENST00000453847 193 ntBASIC2.26□□□□□ -2.05
VPS29Q9UBQ0 NAP1L1P3-201ENST00000462291 880 ntBASIC2.26□□□□□ -2.05
VPS29Q9UBQ0 AC017007.3-201ENST00000479865 435 ntBASIC2.26□□□□□ -2.05
VPS29Q9UBQ0 NAMPTP2-201ENST00000505629 1115 ntBASIC2.26□□□□□ -2.05
VPS29Q9UBQ0 RNA5SP402-201ENST00000517148 110 ntBASIC2.26□□□□□ -2.05
VPS29Q9UBQ0 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC2.26□□□□□ -2.05
VPS29Q9UBQ0 MAL2-205ENST00000521048 575 ntTSL 4 BASIC2.26□□□□□ -2.05
VPS29Q9UBQ0 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC2.26□□□□□ -2.05
VPS29Q9UBQ0 AC105137.2-201ENST00000569073 466 ntBASIC2.26□□□□□ -2.05
VPS29Q9UBQ0 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC2.26□□□□□ -2.05
VPS29Q9UBQ0 AC103810.1-201ENST00000579873 453 ntBASIC2.26□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 128.8 ms