Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 PNPLA4P1-201ENST00000458328 305 ntBASIC2.5□□□□□ -2.01
VAPAQ9P0L0 RPL31P60-201ENST00000478450 367 ntBASIC2.5□□□□□ -2.01
VAPAQ9P0L0 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC2.5□□□□□ -2.01
VAPAQ9P0L0 HIGD1AP13-201ENST00000509878 289 ntBASIC2.5□□□□□ -2.01
VAPAQ9P0L0 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC2.5□□□□□ -2.01
VAPAQ9P0L0 CASP1P1-201ENST00000526345 212 ntBASIC2.5□□□□□ -2.01
VAPAQ9P0L0 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
VAPAQ9P0L0 AP001317.1-201ENST00000531194 960 ntBASIC2.5□□□□□ -2.01
VAPAQ9P0L0 ZDHHC20P3-201ENST00000531576 336 ntBASIC2.5□□□□□ -2.01
VAPAQ9P0L0 AC068339.2-201ENST00000534395 618 ntBASIC2.5□□□□□ -2.01
VAPAQ9P0L0 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC2.5□□□□□ -2.01
VAPAQ9P0L0 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC2.5□□□□□ -2.01
VAPAQ9P0L0 MIR4789-201ENST00000577469 82 ntBASIC2.5□□□□□ -2.01
VAPAQ9P0L0 MIR4429-201ENST00000580105 73 ntBASIC2.5□□□□□ -2.01
VAPAQ9P0L0 MIR3609-201ENST00000582661 80 ntBASIC2.5□□□□□ -2.01
VAPAQ9P0L0 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.5□□□□□ -2.01
VAPAQ9P0L0 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC2.5□□□□□ -2.01
VAPAQ9P0L0 AC008739.2-201ENST00000597006 317 ntBASIC2.5□□□□□ -2.01
VAPAQ9P0L0 MIR6075-201ENST00000620782 95 ntBASIC2.5□□□□□ -2.01
VAPAQ9P0L0 MIR8057-201ENST00000620957 69 ntBASIC2.5□□□□□ -2.01
VAPAQ9P0L0 AL356585.4-201ENST00000623078 1229 ntBASIC2.5□□□□□ -2.01
VAPAQ9P0L0 AC027309.3-201ENST00000623419 351 ntBASIC2.5□□□□□ -2.01
VAPAQ9P0L0 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC2.5□□□□□ -2.01
VAPAQ9P0L0 AC110079.1-202ENST00000635213 138 ntBASIC2.5□□□□□ -2.01
VAPAQ9P0L0 FO624990.1-201ENST00000636373 85 ntBASIC2.5□□□□□ -2.01
VAPAQ9P0L0 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC2.5□□□□□ -2.01
VAPAQ9P0L0 TAB3P1-202ENST00000452645 1634 ntBASIC2.5□□□□□ -2.01
VAPAQ9P0L0 AP000526.1-201ENST00000603308 1388 ntBASIC2.49□□□□□ -2.01
VAPAQ9P0L0 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
VAPAQ9P0L0 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
VAPAQ9P0L0 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC2.49□□□□□ -2.01
VAPAQ9P0L0 RNU1-100P-201ENST00000365255 165 ntBASIC2.49□□□□□ -2.01
VAPAQ9P0L0 ARF4P3-201ENST00000397387 509 ntBASIC2.49□□□□□ -2.01
VAPAQ9P0L0 RNU6ATAC10P-201ENST00000408635 111 ntBASIC2.49□□□□□ -2.01
VAPAQ9P0L0 RNU2-47P-201ENST00000410649 186 ntBASIC2.49□□□□□ -2.01
VAPAQ9P0L0 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC2.49□□□□□ -2.01
VAPAQ9P0L0 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC2.49□□□□□ -2.01
VAPAQ9P0L0 RPL7P37-201ENST00000425095 738 ntBASIC2.49□□□□□ -2.01
VAPAQ9P0L0 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC2.49□□□□□ -2.01
VAPAQ9P0L0 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC2.49□□□□□ -2.01
VAPAQ9P0L0 AC241584.1-201ENST00000438469 1241 ntBASIC2.49□□□□□ -2.01
VAPAQ9P0L0 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.49□□□□□ -2.01
VAPAQ9P0L0 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC2.49□□□□□ -2.01
VAPAQ9P0L0 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC2.49□□□□□ -2.01
VAPAQ9P0L0 AC234775.1-201ENST00000454247 670 ntBASIC2.49□□□□□ -2.01
VAPAQ9P0L0 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC2.49□□□□□ -2.01
VAPAQ9P0L0 RPL32P14-201ENST00000463196 378 ntBASIC2.49□□□□□ -2.01
VAPAQ9P0L0 AC133134.1-201ENST00000466800 359 ntBASIC2.49□□□□□ -2.01
VAPAQ9P0L0 SRIP1-201ENST00000489235 288 ntBASIC2.49□□□□□ -2.01
VAPAQ9P0L0 RPS27P27-201ENST00000498779 255 ntBASIC2.49□□□□□ -2.01
VAPAQ9P0L0 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC2.49□□□□□ -2.01
VAPAQ9P0L0 AC112518.2-201ENST00000508565 425 ntBASIC2.49□□□□□ -2.01
VAPAQ9P0L0 AC010625.1-201ENST00000511296 403 ntBASIC2.49□□□□□ -2.01
VAPAQ9P0L0 AC025881.1-201ENST00000518851 512 ntBASIC2.49□□□□□ -2.01
VAPAQ9P0L0 HMGB1P41-201ENST00000520234 440 ntBASIC2.49□□□□□ -2.01
VAPAQ9P0L0 OR5AK1P-201ENST00000524837 922 ntBASIC2.49□□□□□ -2.01
VAPAQ9P0L0 AC090502.2-201ENST00000549267 280 ntBASIC2.49□□□□□ -2.01
VAPAQ9P0L0 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC2.49□□□□□ -2.01
VAPAQ9P0L0 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC2.49□□□□□ -2.01
VAPAQ9P0L0 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC2.49□□□□□ -2.01
VAPAQ9P0L0 AC079089.3-201ENST00000603094 673 ntBASIC2.49□□□□□ -2.01
VAPAQ9P0L0 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC2.49□□□□□ -2.01
VAPAQ9P0L0 AC097504.2-201ENST00000608088 454 ntBASIC2.49□□□□□ -2.01
VAPAQ9P0L0 AL445493.3-201ENST00000619568 477 ntBASIC2.49□□□□□ -2.01
VAPAQ9P0L0 AC010297.1-201ENST00000623948 149 ntBASIC2.49□□□□□ -2.01
VAPAQ9P0L0 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC2.49□□□□□ -2.01
VAPAQ9P0L0 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC2.49□□□□□ -2.01
VAPAQ9P0L0 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
VAPAQ9P0L0 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC2.49□□□□□ -2.01
VAPAQ9P0L0 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2.49□□□□□ -2.01
VAPAQ9P0L0 AC099654.7-201ENST00000635788 2127 ntBASIC2.48□□□□□ -2.01
VAPAQ9P0L0 AL672167.1-206ENST00000356293 943 ntBASIC2.48□□□□□ -2.01
VAPAQ9P0L0 RNU6-839P-201ENST00000363347 108 ntBASIC2.48□□□□□ -2.01
VAPAQ9P0L0 DEFA7P-201ENST00000382676 285 ntBASIC2.48□□□□□ -2.01
VAPAQ9P0L0 RNU6-657P-201ENST00000383904 107 ntBASIC2.48□□□□□ -2.01
VAPAQ9P0L0 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
VAPAQ9P0L0 RNU6-932P-201ENST00000391108 106 ntBASIC2.48□□□□□ -2.01
VAPAQ9P0L0 AL356057.2-201ENST00000403318 432 ntBASIC2.48□□□□□ -2.01
VAPAQ9P0L0 RNA5SP21-201ENST00000410917 96 ntBASIC2.48□□□□□ -2.01
VAPAQ9P0L0 AL513477.1-202ENST00000417061 214 ntBASIC2.48□□□□□ -2.01
VAPAQ9P0L0 OFD1P2Y-201ENST00000421895 1149 ntBASIC2.48□□□□□ -2.01
VAPAQ9P0L0 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC2.48□□□□□ -2.01
VAPAQ9P0L0 RPL27AP8-201ENST00000424277 446 ntBASIC2.48□□□□□ -2.01
VAPAQ9P0L0 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC2.48□□□□□ -2.01
VAPAQ9P0L0 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC2.48□□□□□ -2.01
VAPAQ9P0L0 AC104164.3-201ENST00000467363 1258 ntBASIC2.48□□□□□ -2.01
VAPAQ9P0L0 AP000852.1-201ENST00000472460 573 ntBASIC2.48□□□□□ -2.01
VAPAQ9P0L0 AC126182.1-201ENST00000478134 357 ntBASIC2.48□□□□□ -2.01
VAPAQ9P0L0 SETP6-201ENST00000479329 568 ntBASIC2.48□□□□□ -2.01
VAPAQ9P0L0 NAA50-206ENST00000493454 964 ntTSL 2 BASIC2.48□□□□□ -2.01
VAPAQ9P0L0 C1GALT1P2-201ENST00000510813 1104 ntBASIC2.48□□□□□ -2.01
VAPAQ9P0L0 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC2.48□□□□□ -2.01
VAPAQ9P0L0 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2.48□□□□□ -2.01
VAPAQ9P0L0 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC2.48□□□□□ -2.01
VAPAQ9P0L0 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC2.48□□□□□ -2.01
VAPAQ9P0L0 AC079600.2-201ENST00000550076 130 ntBASIC2.48□□□□□ -2.01
VAPAQ9P0L0 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC2.48□□□□□ -2.01
VAPAQ9P0L0 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC2.48□□□□□ -2.01
VAPAQ9P0L0 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC2.48□□□□□ -2.01
VAPAQ9P0L0 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC2.48□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 153 ms