Protein–RNA interactions for Protein: Q9NNX9

VCX3A, Variable charge X-linked protein 3, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3AQ9NNX9 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC2.46□□□□□ -2.02
VCX3AQ9NNX9 DBF4P1-201ENST00000412976 1892 ntBASIC2.46□□□□□ -2.02
VCX3AQ9NNX9 SET-203ENST00000372688 801 ntTSL 2 BASIC2.46□□□□□ -2.02
VCX3AQ9NNX9 U6.112-201ENST00000384129 70 ntBASIC2.46□□□□□ -2.02
VCX3AQ9NNX9 RNU6ATAC16P-201ENST00000408591 138 ntBASIC2.46□□□□□ -2.02
VCX3AQ9NNX9 RNU2-43P-201ENST00000410306 190 ntBASIC2.46□□□□□ -2.02
VCX3AQ9NNX9 AC096533.1-201ENST00000411645 353 ntBASIC2.46□□□□□ -2.02
VCX3AQ9NNX9 BX664727.1-201ENST00000416024 466 ntBASIC2.46□□□□□ -2.02
VCX3AQ9NNX9 DEFB130D-201ENST00000426866 237 ntBASIC2.46□□□□□ -2.02
VCX3AQ9NNX9 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC2.46□□□□□ -2.02
VCX3AQ9NNX9 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC2.46□□□□□ -2.02
VCX3AQ9NNX9 ARPC3P1-201ENST00000437218 533 ntBASIC2.46□□□□□ -2.02
VCX3AQ9NNX9 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC2.46□□□□□ -2.02
VCX3AQ9NNX9 RPL26P6-201ENST00000440913 438 ntBASIC2.46□□□□□ -2.02
VCX3AQ9NNX9 WASF1P1-201ENST00000447560 1131 ntBASIC2.46□□□□□ -2.02
VCX3AQ9NNX9 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC2.46□□□□□ -2.02
VCX3AQ9NNX9 CCNB1IP1P3-201ENST00000454702 829 ntBASIC2.46□□□□□ -2.02
VCX3AQ9NNX9 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC2.46□□□□□ -2.02
VCX3AQ9NNX9 AC231760.1-201ENST00000498002 260 ntBASIC2.46□□□□□ -2.02
VCX3AQ9NNX9 COX7A2P2-201ENST00000505291 250 ntBASIC2.46□□□□□ -2.02
VCX3AQ9NNX9 AC008716.1-201ENST00000511084 513 ntBASIC2.46□□□□□ -2.02
VCX3AQ9NNX9 RNU6-362P-201ENST00000516736 90 ntBASIC2.46□□□□□ -2.02
VCX3AQ9NNX9 RN7SKP40-201ENST00000517211 242 ntBASIC2.46□□□□□ -2.02
VCX3AQ9NNX9 AC087808.1-201ENST00000520501 361 ntBASIC2.46□□□□□ -2.02
VCX3AQ9NNX9 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC2.46□□□□□ -2.02
VCX3AQ9NNX9 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC2.46□□□□□ -2.02
VCX3AQ9NNX9 AC121758.2-201ENST00000553271 193 ntBASIC2.46□□□□□ -2.02
VCX3AQ9NNX9 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC2.46□□□□□ -2.02
VCX3AQ9NNX9 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC2.46□□□□□ -2.02
VCX3AQ9NNX9 HMGB1P6-201ENST00000569046 646 ntBASIC2.46□□□□□ -2.02
VCX3AQ9NNX9 AC091946.2-201ENST00000606105 291 ntBASIC2.46□□□□□ -2.02
VCX3AQ9NNX9 AC006213.4-201ENST00000616184 634 ntBASIC2.46□□□□□ -2.02
VCX3AQ9NNX9 MIR7641-1-201ENST00000627518 61 ntBASIC2.46□□□□□ -2.02
VCX3AQ9NNX9 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.46□□□□□ -2.02
VCX3AQ9NNX9 ZNF519P1-201ENST00000449011 1626 ntBASIC2.46□□□□□ -2.02
VCX3AQ9NNX9 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC2.45□□□□□ -2.02
VCX3AQ9NNX9 RPLP0P7-201ENST00000416050 667 ntBASIC2.45□□□□□ -2.02
VCX3AQ9NNX9 BEND7P1-201ENST00000422058 457 ntBASIC2.45□□□□□ -2.02
VCX3AQ9NNX9 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.45□□□□□ -2.02
VCX3AQ9NNX9 MTCYBP32-201ENST00000427945 1084 ntBASIC2.45□□□□□ -2.02
VCX3AQ9NNX9 AL512637.2-201ENST00000431287 1256 ntBASIC2.45□□□□□ -2.02
VCX3AQ9NNX9 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC2.45□□□□□ -2.02
VCX3AQ9NNX9 AC006028.1-201ENST00000438379 402 ntBASIC2.45□□□□□ -2.02
VCX3AQ9NNX9 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC2.45□□□□□ -2.02
VCX3AQ9NNX9 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC2.45□□□□□ -2.02
VCX3AQ9NNX9 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
VCX3AQ9NNX9 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC2.45□□□□□ -2.02
VCX3AQ9NNX9 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC2.45□□□□□ -2.02
VCX3AQ9NNX9 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC2.45□□□□□ -2.02
VCX3AQ9NNX9 AC090096.1-201ENST00000489168 390 ntBASIC2.45□□□□□ -2.02
VCX3AQ9NNX9 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC2.45□□□□□ -2.02
VCX3AQ9NNX9 AC112518.2-201ENST00000508565 425 ntBASIC2.45□□□□□ -2.02
VCX3AQ9NNX9 AC025768.1-201ENST00000510057 267 ntBASIC2.45□□□□□ -2.02
VCX3AQ9NNX9 HMGB3P3-201ENST00000510526 400 ntBASIC2.45□□□□□ -2.02
VCX3AQ9NNX9 AC121161.1-201ENST00000510606 652 ntBASIC2.45□□□□□ -2.02
VCX3AQ9NNX9 HMGN1P15-201ENST00000513870 295 ntBASIC2.45□□□□□ -2.02
VCX3AQ9NNX9 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC2.45□□□□□ -2.02
VCX3AQ9NNX9 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC2.45□□□□□ -2.02
VCX3AQ9NNX9 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC2.45□□□□□ -2.02
VCX3AQ9NNX9 AC024224.1-201ENST00000538284 609 ntBASIC2.45□□□□□ -2.02
VCX3AQ9NNX9 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC2.45□□□□□ -2.02
VCX3AQ9NNX9 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.45□□□□□ -2.02
VCX3AQ9NNX9 AMZ2P1-203ENST00000565833 850 ntBASIC2.45□□□□□ -2.02
VCX3AQ9NNX9 AC068135.2-201ENST00000569293 1028 ntBASIC2.45□□□□□ -2.02
VCX3AQ9NNX9 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC2.45□□□□□ -2.02
VCX3AQ9NNX9 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC2.45□□□□□ -2.02
VCX3AQ9NNX9 MIR3921-201ENST00000577308 85 ntBASIC2.45□□□□□ -2.02
VCX3AQ9NNX9 AC103810.1-201ENST00000579873 453 ntBASIC2.45□□□□□ -2.02
VCX3AQ9NNX9 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC2.45□□□□□ -2.02
VCX3AQ9NNX9 RPAP2P1-201ENST00000603626 1168 ntBASIC2.45□□□□□ -2.02
VCX3AQ9NNX9 AL035413.2-201ENST00000604801 525 ntBASIC2.45□□□□□ -2.02
VCX3AQ9NNX9 AC079791.1-201ENST00000605356 973 ntBASIC2.45□□□□□ -2.02
VCX3AQ9NNX9 AP005137.2-201ENST00000609238 400 ntBASIC2.45□□□□□ -2.02
VCX3AQ9NNX9 AC090132.2-201ENST00000615881 347 ntBASIC2.45□□□□□ -2.02
VCX3AQ9NNX9 AC010872.1-201ENST00000624225 675 ntBASIC2.45□□□□□ -2.02
VCX3AQ9NNX9 AC096644.4-201ENST00000563417 2912 ntBASIC2.45□□□□□ -2.02
VCX3AQ9NNX9 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
VCX3AQ9NNX9 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.45□□□□□ -2.02
VCX3AQ9NNX9 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.44□□□□□ -2.02
VCX3AQ9NNX9 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.44□□□□□ -2.02
VCX3AQ9NNX9 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.44□□□□□ -2.02
VCX3AQ9NNX9 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
VCX3AQ9NNX9 RPL21P132-201ENST00000331267 462 ntBASIC2.44□□□□□ -2.02
VCX3AQ9NNX9 MIRLET7G-201ENST00000362280 84 ntBASIC2.44□□□□□ -2.02
VCX3AQ9NNX9 RNU6-549P-201ENST00000384433 107 ntBASIC2.44□□□□□ -2.02
VCX3AQ9NNX9 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC2.44□□□□□ -2.02
VCX3AQ9NNX9 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC2.44□□□□□ -2.02
VCX3AQ9NNX9 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC2.44□□□□□ -2.02
VCX3AQ9NNX9 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
VCX3AQ9NNX9 AC092427.1-202ENST00000430569 476 ntBASIC2.44□□□□□ -2.02
VCX3AQ9NNX9 RPS20P5-201ENST00000434808 360 ntBASIC2.44□□□□□ -2.02
VCX3AQ9NNX9 THAP5P1-201ENST00000439089 262 ntBASIC2.44□□□□□ -2.02
VCX3AQ9NNX9 AL714022.1-201ENST00000439897 151 ntBASIC2.44□□□□□ -2.02
VCX3AQ9NNX9 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC2.44□□□□□ -2.02
VCX3AQ9NNX9 VN1R10P-201ENST00000447106 875 ntBASIC2.44□□□□□ -2.02
VCX3AQ9NNX9 AL500527.1-201ENST00000448532 255 ntBASIC2.44□□□□□ -2.02
VCX3AQ9NNX9 USP9YP34-201ENST00000453983 808 ntBASIC2.44□□□□□ -2.02
VCX3AQ9NNX9 OR2AF1P-201ENST00000454899 889 ntBASIC2.44□□□□□ -2.02
VCX3AQ9NNX9 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
VCX3AQ9NNX9 AC092757.1-201ENST00000467293 467 ntBASIC2.44□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 106.8 ms