Protein–RNA interactions for Protein: Q9H4W6

EBF3, Transcription factor COE3, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3Q9H4W6 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC4.03□□□□□ -1.77
EBF3Q9H4W6 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC4.02□□□□□ -1.77
EBF3Q9H4W6 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.02□□□□□ -1.77
EBF3Q9H4W6 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
EBF3Q9H4W6 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC4.02□□□□□ -1.77
EBF3Q9H4W6 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
EBF3Q9H4W6 Y_RNA.97-201ENST00000363094 102 ntBASIC4.02□□□□□ -1.77
EBF3Q9H4W6 RNU5E-5P-201ENST00000365379 116 ntBASIC4.02□□□□□ -1.77
EBF3Q9H4W6 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC4.02□□□□□ -1.77
EBF3Q9H4W6 RPL21P17-201ENST00000397467 475 ntBASIC4.02□□□□□ -1.77
EBF3Q9H4W6 FCF1P10-201ENST00000407590 479 ntBASIC4.02□□□□□ -1.77
EBF3Q9H4W6 MIR1251-201ENST00000408552 70 ntBASIC4.02□□□□□ -1.77
EBF3Q9H4W6 AC073264.1-201ENST00000411508 416 ntBASIC4.02□□□□□ -1.77
EBF3Q9H4W6 RPL7AP73-201ENST00000413490 353 ntBASIC4.02□□□□□ -1.77
EBF3Q9H4W6 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC4.02□□□□□ -1.77
EBF3Q9H4W6 AL953862.1-201ENST00000423016 168 ntBASIC4.02□□□□□ -1.77
EBF3Q9H4W6 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC4.02□□□□□ -1.77
EBF3Q9H4W6 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC4.02□□□□□ -1.77
EBF3Q9H4W6 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC4.02□□□□□ -1.77
EBF3Q9H4W6 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC4.02□□□□□ -1.77
EBF3Q9H4W6 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC4.02□□□□□ -1.77
EBF3Q9H4W6 RPL23AP15-201ENST00000450202 459 ntBASIC4.02□□□□□ -1.77
EBF3Q9H4W6 NDUFS5P3-201ENST00000450668 321 ntBASIC4.02□□□□□ -1.77
EBF3Q9H4W6 RGS5-217ENST00000451759 835 ntTSL 3 BASIC4.02□□□□□ -1.77
EBF3Q9H4W6 RPL21P11-201ENST00000461458 483 ntBASIC4.02□□□□□ -1.77
EBF3Q9H4W6 RPL31P61-201ENST00000496160 376 ntBASIC4.02□□□□□ -1.77
EBF3Q9H4W6 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC4.02□□□□□ -1.77
EBF3Q9H4W6 AC019235.1-201ENST00000503847 207 ntBASIC4.02□□□□□ -1.77
EBF3Q9H4W6 BTF3L4P4-201ENST00000506381 449 ntBASIC4.02□□□□□ -1.77
EBF3Q9H4W6 RNU6-202P-201ENST00000515998 96 ntBASIC4.02□□□□□ -1.77
EBF3Q9H4W6 RNA5SP216-201ENST00000516111 123 ntBASIC4.02□□□□□ -1.77
EBF3Q9H4W6 SCARNA15.1-201ENST00000516384 125 ntBASIC4.02□□□□□ -1.77
EBF3Q9H4W6 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC4.02□□□□□ -1.77
EBF3Q9H4W6 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
EBF3Q9H4W6 DEFB131D-201ENST00000526803 184 ntBASIC4.02□□□□□ -1.77
EBF3Q9H4W6 OR5AQ1P-201ENST00000527596 927 ntBASIC4.02□□□□□ -1.77
EBF3Q9H4W6 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC4.02□□□□□ -1.77
EBF3Q9H4W6 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC4.02□□□□□ -1.77
EBF3Q9H4W6 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC4.02□□□□□ -1.77
EBF3Q9H4W6 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC4.02□□□□□ -1.77
EBF3Q9H4W6 AC131902.3-201ENST00000611767 581 ntBASIC4.02□□□□□ -1.77
EBF3Q9H4W6 AC012314.7-201ENST00000619693 93 ntBASIC4.02□□□□□ -1.77
EBF3Q9H4W6 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC4.02□□□□□ -1.77
EBF3Q9H4W6 AP006248.2-201ENST00000623309 592 ntBASIC4.02□□□□□ -1.77
EBF3Q9H4W6 MIR6863-201ENST00000636112 90 ntBASIC4.02□□□□□ -1.77
EBF3Q9H4W6 CRYM-AS1-204ENST00000637983 556 ntBASIC4.02□□□□□ -1.77
EBF3Q9H4W6 AC009093.8-201ENST00000641769 292 ntBASIC4.02□□□□□ -1.77
EBF3Q9H4W6 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC4.02□□□□□ -1.77
EBF3Q9H4W6 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC4.02□□□□□ -1.77
EBF3Q9H4W6 PNPT1P2-201ENST00000456768 2050 ntBASIC4.02□□□□□ -1.77
EBF3Q9H4W6 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
EBF3Q9H4W6 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
EBF3Q9H4W6 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
EBF3Q9H4W6 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
EBF3Q9H4W6 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
EBF3Q9H4W6 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC4.01□□□□□ -1.77
EBF3Q9H4W6 GDI2P1-201ENST00000429312 1336 ntBASIC4.01□□□□□ -1.77
EBF3Q9H4W6 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
EBF3Q9H4W6 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
EBF3Q9H4W6 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC4.01□□□□□ -1.77
EBF3Q9H4W6 RNU6-462P-201ENST00000362659 105 ntBASIC4.01□□□□□ -1.77
EBF3Q9H4W6 U1.1-201ENST00000384101 164 ntBASIC4.01□□□□□ -1.77
EBF3Q9H4W6 SNORD3H-201ENST00000384486 214 ntBASIC4.01□□□□□ -1.77
EBF3Q9H4W6 Y_RNA.535-201ENST00000384612 99 ntBASIC4.01□□□□□ -1.77
EBF3Q9H4W6 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
EBF3Q9H4W6 PRRC2CP1-201ENST00000404428 159 ntBASIC4.01□□□□□ -1.77
EBF3Q9H4W6 USP9YP13-201ENST00000417797 480 ntBASIC4.01□□□□□ -1.77
EBF3Q9H4W6 AC008280.1-201ENST00000418851 412 ntBASIC4.01□□□□□ -1.77
EBF3Q9H4W6 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC4.01□□□□□ -1.77
EBF3Q9H4W6 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC4.01□□□□□ -1.77
EBF3Q9H4W6 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC4.01□□□□□ -1.77
EBF3Q9H4W6 AL356583.2-201ENST00000426536 280 ntBASIC4.01□□□□□ -1.77
EBF3Q9H4W6 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC4.01□□□□□ -1.77
EBF3Q9H4W6 AC087650.1-201ENST00000431445 468 ntBASIC4.01□□□□□ -1.77
EBF3Q9H4W6 AC010881.1-201ENST00000433830 235 ntBASIC4.01□□□□□ -1.77
EBF3Q9H4W6 RANP8-201ENST00000444720 713 ntBASIC4.01□□□□□ -1.77
EBF3Q9H4W6 PDSS1P2-201ENST00000449397 678 ntBASIC4.01□□□□□ -1.77
EBF3Q9H4W6 RBM43P1-201ENST00000476891 1081 ntBASIC4.01□□□□□ -1.77
EBF3Q9H4W6 RN7SL271P-201ENST00000487601 295 ntBASIC4.01□□□□□ -1.77
EBF3Q9H4W6 RNF138P1-201ENST00000502765 546 ntBASIC4.01□□□□□ -1.77
EBF3Q9H4W6 ARL4AP2-201ENST00000507378 601 ntBASIC4.01□□□□□ -1.77
EBF3Q9H4W6 AC108078.1-201ENST00000508073 725 ntBASIC4.01□□□□□ -1.77
EBF3Q9H4W6 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC4.01□□□□□ -1.77
EBF3Q9H4W6 RNU6-358P-201ENST00000516564 75 ntBASIC4.01□□□□□ -1.77
EBF3Q9H4W6 RN7SKP96-201ENST00000516948 297 ntBASIC4.01□□□□□ -1.77
EBF3Q9H4W6 RNU6-430P-201ENST00000517078 107 ntBASIC4.01□□□□□ -1.77
EBF3Q9H4W6 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC4.01□□□□□ -1.77
EBF3Q9H4W6 AC087369.1-201ENST00000520775 996 ntBASIC4.01□□□□□ -1.77
EBF3Q9H4W6 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
EBF3Q9H4W6 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC4.01□□□□□ -1.77
EBF3Q9H4W6 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC4.01□□□□□ -1.77
EBF3Q9H4W6 CYCSP2-201ENST00000558168 301 ntBASIC4.01□□□□□ -1.77
EBF3Q9H4W6 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC4.01□□□□□ -1.77
EBF3Q9H4W6 AC022968.1-201ENST00000567372 442 ntBASIC4.01□□□□□ -1.77
EBF3Q9H4W6 AL139286.1-201ENST00000604465 483 ntBASIC4.01□□□□□ -1.77
EBF3Q9H4W6 AC090578.1-201ENST00000604955 591 ntBASIC4.01□□□□□ -1.77
EBF3Q9H4W6 AC087045.1-201ENST00000605856 382 ntBASIC4.01□□□□□ -1.77
EBF3Q9H4W6 AC008536.2-201ENST00000607284 349 ntBASIC4.01□□□□□ -1.77
EBF3Q9H4W6 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC4.01□□□□□ -1.77
EBF3Q9H4W6 AP001521.1-201ENST00000609150 300 ntBASIC4.01□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 109.3 ms