Protein–RNA interactions for Protein: Q9BY12

SCAPER, S phase cyclin A-associated protein in the endoplasmic reticulum, humanhuman

Predictions only

Length 1,400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPERQ9BY12 DNAJC19P9-201ENST00000555084 351 ntBASIC2.84□□□□□ -1.96
SCAPERQ9BY12 AC006270.2-201ENST00000578523 652 ntBASIC2.84□□□□□ -1.96
SCAPERQ9BY12 AC103810.1-201ENST00000579873 453 ntBASIC2.84□□□□□ -1.96
SCAPERQ9BY12 SNORD39.2-201ENST00000579995 76 ntBASIC2.84□□□□□ -1.96
SCAPERQ9BY12 AC068790.3-201ENST00000602988 553 ntBASIC2.84□□□□□ -1.96
SCAPERQ9BY12 AC067838.1-201ENST00000606064 577 ntBASIC2.84□□□□□ -1.96
SCAPERQ9BY12 VN1R74P-201ENST00000613259 503 ntBASIC2.84□□□□□ -1.96
SCAPERQ9BY12 AC010872.1-201ENST00000624225 675 ntBASIC2.84□□□□□ -1.96
SCAPERQ9BY12 AC090897.3-201ENST00000636973 1157 ntBASIC2.84□□□□□ -1.96
SCAPERQ9BY12 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.84□□□□□ -1.96
SCAPERQ9BY12 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
SCAPERQ9BY12 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
SCAPERQ9BY12 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
SCAPERQ9BY12 Y_RNA.116-201ENST00000363292 103 ntBASIC2.83□□□□□ -1.96
SCAPERQ9BY12 MIR124-3-201ENST00000384866 87 ntBASIC2.83□□□□□ -1.96
SCAPERQ9BY12 RNU2-20P-201ENST00000410425 191 ntBASIC2.83□□□□□ -1.96
SCAPERQ9BY12 RPS7P5-201ENST00000441482 581 ntBASIC2.83□□□□□ -1.96
SCAPERQ9BY12 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC2.83□□□□□ -1.96
SCAPERQ9BY12 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC2.83□□□□□ -1.96
SCAPERQ9BY12 CLIC4P1-201ENST00000453177 535 ntBASIC2.83□□□□□ -1.96
SCAPERQ9BY12 HMGB3P30-201ENST00000457863 606 ntBASIC2.83□□□□□ -1.96
SCAPERQ9BY12 RPL37P25-201ENST00000507308 276 ntBASIC2.83□□□□□ -1.96
SCAPERQ9BY12 RN7SKP96-201ENST00000516948 297 ntBASIC2.83□□□□□ -1.96
SCAPERQ9BY12 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC2.83□□□□□ -1.96
SCAPERQ9BY12 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
SCAPERQ9BY12 AP003385.6-201ENST00000531603 374 ntBASIC2.83□□□□□ -1.96
SCAPERQ9BY12 AC007115.1-201ENST00000546853 234 ntBASIC2.83□□□□□ -1.96
SCAPERQ9BY12 AC010546.1-201ENST00000569391 485 ntBASIC2.83□□□□□ -1.96
SCAPERQ9BY12 MIR4446-201ENST00000578505 67 ntBASIC2.83□□□□□ -1.96
SCAPERQ9BY12 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2.83□□□□□ -1.96
SCAPERQ9BY12 AC131280.1-202ENST00000624067 4211 ntBASIC2.83□□□□□ -1.96
SCAPERQ9BY12 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.83□□□□□ -1.96
SCAPERQ9BY12 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC2.82□□□□□ -1.96
SCAPERQ9BY12 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC2.82□□□□□ -1.96
SCAPERQ9BY12 RNA5SP37-201ENST00000365420 130 ntBASIC2.82□□□□□ -1.96
SCAPERQ9BY12 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
SCAPERQ9BY12 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC2.82□□□□□ -1.96
SCAPERQ9BY12 HMGN2P20-201ENST00000437531 273 ntBASIC2.82□□□□□ -1.96
SCAPERQ9BY12 AL031659.1-201ENST00000447075 539 ntBASIC2.82□□□□□ -1.96
SCAPERQ9BY12 MTCO1P42-201ENST00000457379 726 ntBASIC2.82□□□□□ -1.96
SCAPERQ9BY12 AC005912.1-201ENST00000495392 255 ntBASIC2.82□□□□□ -1.96
SCAPERQ9BY12 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC2.82□□□□□ -1.96
SCAPERQ9BY12 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC2.82□□□□□ -1.96
SCAPERQ9BY12 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC2.82□□□□□ -1.96
SCAPERQ9BY12 AC100801.1-201ENST00000517368 517 ntTSL 3 BASIC2.82□□□□□ -1.96
SCAPERQ9BY12 RPS3AP4-201ENST00000555161 764 ntBASIC2.82□□□□□ -1.96
SCAPERQ9BY12 ACTR3BP3-201ENST00000565577 979 ntBASIC2.82□□□□□ -1.96
SCAPERQ9BY12 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC2.82□□□□□ -1.96
SCAPERQ9BY12 AC123786.2-201ENST00000603459 275 ntBASIC2.82□□□□□ -1.96
SCAPERQ9BY12 RBM12B-AS1-201ENST00000623283 653 ntBASIC2.82□□□□□ -1.96
SCAPERQ9BY12 KPNA2P1-201ENST00000458289 1591 ntBASIC2.82□□□□□ -1.96
SCAPERQ9BY12 CKAP2P1-201ENST00000555477 2049 ntBASIC2.82□□□□□ -1.96
SCAPERQ9BY12 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
SCAPERQ9BY12 SNORA67.5-201ENST00000391036 107 ntBASIC2.81□□□□□ -1.96
SCAPERQ9BY12 RNA5SP492-201ENST00000411330 114 ntBASIC2.81□□□□□ -1.96
SCAPERQ9BY12 WARS2P1-201ENST00000429678 537 ntBASIC2.81□□□□□ -1.96
SCAPERQ9BY12 SNORD116-26-201ENST00000516006 96 ntBASIC2.81□□□□□ -1.96
SCAPERQ9BY12 AP004242.1-201ENST00000533701 349 ntBASIC2.81□□□□□ -1.96
SCAPERQ9BY12 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC2.81□□□□□ -1.96
SCAPERQ9BY12 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC2.81□□□□□ -1.96
SCAPERQ9BY12 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC2.81□□□□□ -1.96
SCAPERQ9BY12 MIR4458-201ENST00000578872 75 ntBASIC2.81□□□□□ -1.96
SCAPERQ9BY12 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC2.81□□□□□ -1.96
SCAPERQ9BY12 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC2.81□□□□□ -1.96
SCAPERQ9BY12 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.81□□□□□ -1.96
SCAPERQ9BY12 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.8□□□□□ -1.96
SCAPERQ9BY12 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.8□□□□□ -1.96
SCAPERQ9BY12 RNU1-101P-201ENST00000391171 127 ntBASIC2.8□□□□□ -1.96
SCAPERQ9BY12 RNA5SP82-201ENST00000516707 92 ntBASIC2.8□□□□□ -1.96
SCAPERQ9BY12 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC2.8□□□□□ -1.96
SCAPERQ9BY12 AKIRIN1P1-201ENST00000547384 544 ntBASIC2.8□□□□□ -1.96
SCAPERQ9BY12 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC2.8□□□□□ -1.96
SCAPERQ9BY12 AP001029.3-201ENST00000588063 596 ntBASIC2.8□□□□□ -1.96
SCAPERQ9BY12 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC2.8□□□□□ -1.96
SCAPERQ9BY12 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC2.8□□□□□ -1.96
SCAPERQ9BY12 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
SCAPERQ9BY12 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.8□□□□□ -1.96
SCAPERQ9BY12 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
SCAPERQ9BY12 AL590762.3-201ENST00000436372 640 ntBASIC2.79□□□□□ -1.96
SCAPERQ9BY12 CASP3P1-201ENST00000446037 609 ntBASIC2.79□□□□□ -1.96
SCAPERQ9BY12 AL157827.1-201ENST00000447622 132 ntBASIC2.79□□□□□ -1.96
SCAPERQ9BY12 AC245517.4-201ENST00000448601 281 ntBASIC2.79□□□□□ -1.96
SCAPERQ9BY12 CDC42P1-201ENST00000456658 548 ntBASIC2.79□□□□□ -1.96
SCAPERQ9BY12 RPS29P12-201ENST00000460178 152 ntBASIC2.79□□□□□ -1.96
SCAPERQ9BY12 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC2.79□□□□□ -1.96
SCAPERQ9BY12 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.79□□□□□ -1.96
SCAPERQ9BY12 MYL12BP1-201ENST00000569826 507 ntBASIC2.79□□□□□ -1.96
SCAPERQ9BY12 AL139811.1-201ENST00000424779 2299 ntBASIC2.79□□□□□ -1.96
SCAPERQ9BY12 Z82209.1-201ENST00000422141 2135 ntBASIC2.79□□□□□ -1.96
SCAPERQ9BY12 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC2.78□□□□□ -1.96
SCAPERQ9BY12 MFF-206ENST00000392059 1710 ntTSL 5 BASIC2.78□□□□□ -1.96
SCAPERQ9BY12 MIR518E-201ENST00000385252 88 ntBASIC2.78□□□□□ -1.96
SCAPERQ9BY12 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC2.78□□□□□ -1.96
SCAPERQ9BY12 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC2.78□□□□□ -1.96
SCAPERQ9BY12 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC2.78□□□□□ -1.96
SCAPERQ9BY12 ELOCP10-201ENST00000440624 327 ntBASIC2.78□□□□□ -1.96
SCAPERQ9BY12 AC092473.1-201ENST00000441098 221 ntBASIC2.78□□□□□ -1.96
SCAPERQ9BY12 RNU7-95P-201ENST00000459222 64 ntBASIC2.78□□□□□ -1.96
SCAPERQ9BY12 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC2.78□□□□□ -1.96
SCAPERQ9BY12 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC2.78□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 129.3 ms