Protein–RNA interactions for Protein: Q9BTN0

LRFN3, Leucine-rich repeat and fibronectin type-III domain-containing protein 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3Q9BTN0 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC4.47□□□□□ -1.69
LRFN3Q9BTN0 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC4.47□□□□□ -1.69
LRFN3Q9BTN0 AC234775.1-201ENST00000454247 670 ntBASIC4.47□□□□□ -1.69
LRFN3Q9BTN0 RN7SL517P-201ENST00000462240 305 ntBASIC4.47□□□□□ -1.69
LRFN3Q9BTN0 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC4.47□□□□□ -1.69
LRFN3Q9BTN0 MTND1P3-201ENST00000484956 952 ntBASIC4.47□□□□□ -1.69
LRFN3Q9BTN0 HMGN1P12-201ENST00000499125 195 ntBASIC4.47□□□□□ -1.69
LRFN3Q9BTN0 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC4.47□□□□□ -1.69
LRFN3Q9BTN0 RNU1-95P-201ENST00000516357 160 ntBASIC4.47□□□□□ -1.69
LRFN3Q9BTN0 RNU1-128P-201ENST00000516704 160 ntBASIC4.47□□□□□ -1.69
LRFN3Q9BTN0 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC4.47□□□□□ -1.69
LRFN3Q9BTN0 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC4.47□□□□□ -1.69
LRFN3Q9BTN0 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC4.47□□□□□ -1.69
LRFN3Q9BTN0 AL356432.3-201ENST00000568952 465 ntBASIC4.47□□□□□ -1.69
LRFN3Q9BTN0 AC099489.2-201ENST00000574976 260 ntBASIC4.47□□□□□ -1.69
LRFN3Q9BTN0 MTCO3P13-201ENST00000577757 781 ntBASIC4.47□□□□□ -1.69
LRFN3Q9BTN0 AC060780.3-201ENST00000589464 80 ntBASIC4.47□□□□□ -1.69
LRFN3Q9BTN0 AC245014.2-201ENST00000603689 287 ntBASIC4.47□□□□□ -1.69
LRFN3Q9BTN0 AC008277.2-201ENST00000605196 797 ntBASIC4.47□□□□□ -1.69
LRFN3Q9BTN0 AC246785.4-201ENST00000605374 287 ntBASIC4.47□□□□□ -1.69
LRFN3Q9BTN0 AL590282.1-201ENST00000610379 1136 ntBASIC4.47□□□□□ -1.69
LRFN3Q9BTN0 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
LRFN3Q9BTN0 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC4.47□□□□□ -1.69
LRFN3Q9BTN0 AC010338.1-201ENST00000621823 717 ntBASIC4.47□□□□□ -1.69
LRFN3Q9BTN0 AL354798.1-201ENST00000622505 329 ntBASIC4.47□□□□□ -1.69
LRFN3Q9BTN0 AP003122.6-201ENST00000623831 495 ntBASIC4.47□□□□□ -1.69
LRFN3Q9BTN0 AC110994.2-201ENST00000635481 492 ntBASIC4.47□□□□□ -1.69
LRFN3Q9BTN0 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC4.47□□□□□ -1.69
LRFN3Q9BTN0 ABBA01000935.2-201ENST00000637477 838 ntBASIC4.47□□□□□ -1.69
LRFN3Q9BTN0 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
LRFN3Q9BTN0 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
LRFN3Q9BTN0 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
LRFN3Q9BTN0 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
LRFN3Q9BTN0 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC4.46□□□□□ -1.69
LRFN3Q9BTN0 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC4.46□□□□□ -1.69
LRFN3Q9BTN0 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC4.46□□□□□ -1.69
LRFN3Q9BTN0 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.69
LRFN3Q9BTN0 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
LRFN3Q9BTN0 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
LRFN3Q9BTN0 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
LRFN3Q9BTN0 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
LRFN3Q9BTN0 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC4.46□□□□□ -1.7
LRFN3Q9BTN0 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC4.46□□□□□ -1.7
LRFN3Q9BTN0 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
LRFN3Q9BTN0 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
LRFN3Q9BTN0 Y_RNA.89-201ENST00000363031 102 ntBASIC4.46□□□□□ -1.7
LRFN3Q9BTN0 GSTA9P-201ENST00000406231 611 ntBASIC4.46□□□□□ -1.7
LRFN3Q9BTN0 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC4.46□□□□□ -1.7
LRFN3Q9BTN0 EEF1A1P40-201ENST00000412883 573 ntBASIC4.46□□□□□ -1.7
LRFN3Q9BTN0 RPS7P15-201ENST00000415804 584 ntBASIC4.46□□□□□ -1.7
LRFN3Q9BTN0 AL139095.3-201ENST00000419672 1203 ntBASIC4.46□□□□□ -1.7
LRFN3Q9BTN0 AC099677.1-201ENST00000420575 175 ntBASIC4.46□□□□□ -1.7
LRFN3Q9BTN0 RPL7AP49-201ENST00000429522 581 ntBASIC4.46□□□□□ -1.7
LRFN3Q9BTN0 AL591438.1-201ENST00000433508 581 ntBASIC4.46□□□□□ -1.7
LRFN3Q9BTN0 AC009961.2-201ENST00000435771 251 ntBASIC4.46□□□□□ -1.7
LRFN3Q9BTN0 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC4.46□□□□□ -1.7
LRFN3Q9BTN0 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
LRFN3Q9BTN0 AL451074.3-201ENST00000437709 472 ntBASIC4.46□□□□□ -1.7
LRFN3Q9BTN0 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC4.46□□□□□ -1.7
LRFN3Q9BTN0 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC4.46□□□□□ -1.7
LRFN3Q9BTN0 KCTD9P5-201ENST00000504141 1170 ntBASIC4.46□□□□□ -1.7
LRFN3Q9BTN0 CENPUP1-201ENST00000526649 1202 ntBASIC4.46□□□□□ -1.7
LRFN3Q9BTN0 AP001893.2-201ENST00000526949 202 ntBASIC4.46□□□□□ -1.7
LRFN3Q9BTN0 HMGB1P33-201ENST00000563485 527 ntBASIC4.46□□□□□ -1.7
LRFN3Q9BTN0 AL391840.1-201ENST00000571144 367 ntBASIC4.46□□□□□ -1.7
LRFN3Q9BTN0 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC4.46□□□□□ -1.7
LRFN3Q9BTN0 HMGN1P30-201ENST00000589286 268 ntBASIC4.46□□□□□ -1.7
LRFN3Q9BTN0 AC005261.5-201ENST00000596280 355 ntBASIC4.46□□□□□ -1.7
LRFN3Q9BTN0 AL139286.1-201ENST00000604465 483 ntBASIC4.46□□□□□ -1.7
LRFN3Q9BTN0 AC004908.2-201ENST00000609090 574 ntBASIC4.46□□□□□ -1.7
LRFN3Q9BTN0 OR6R2P-201ENST00000609216 300 ntBASIC4.46□□□□□ -1.7
LRFN3Q9BTN0 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC4.46□□□□□ -1.7
LRFN3Q9BTN0 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.7
LRFN3Q9BTN0 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
LRFN3Q9BTN0 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
LRFN3Q9BTN0 AC116096.1-201ENST00000566804 2314 ntBASIC4.46□□□□□ -1.7
LRFN3Q9BTN0 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC4.46□□□□□ -1.7
LRFN3Q9BTN0 MFF-206ENST00000392059 1710 ntTSL 5 BASIC4.46□□□□□ -1.7
LRFN3Q9BTN0 MTCO1P12-201ENST00000414273 1543 ntBASIC4.46□□□□□ -1.7
LRFN3Q9BTN0 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.7
LRFN3Q9BTN0 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
LRFN3Q9BTN0 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC4.45□□□□□ -1.7
LRFN3Q9BTN0 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
LRFN3Q9BTN0 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.45□□□□□ -1.7
LRFN3Q9BTN0 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
LRFN3Q9BTN0 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
LRFN3Q9BTN0 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
LRFN3Q9BTN0 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
LRFN3Q9BTN0 RNU2-47P-201ENST00000410649 186 ntBASIC4.45□□□□□ -1.7
LRFN3Q9BTN0 AC013429.2-201ENST00000418798 781 ntBASIC4.45□□□□□ -1.7
LRFN3Q9BTN0 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
LRFN3Q9BTN0 AL136380.1-201ENST00000447970 162 ntBASIC4.45□□□□□ -1.7
LRFN3Q9BTN0 AL451050.1-201ENST00000450126 415 ntBASIC4.45□□□□□ -1.7
LRFN3Q9BTN0 AL162388.1-201ENST00000450912 352 ntBASIC4.45□□□□□ -1.7
LRFN3Q9BTN0 AC108059.3-201ENST00000456388 214 ntBASIC4.45□□□□□ -1.7
LRFN3Q9BTN0 ALG13-211ENST00000473389 693 ntTSL 2 BASIC4.45□□□□□ -1.7
LRFN3Q9BTN0 RPS3AP14-201ENST00000483907 780 ntBASIC4.45□□□□□ -1.7
LRFN3Q9BTN0 AC055855.1-201ENST00000489563 579 ntBASIC4.45□□□□□ -1.7
LRFN3Q9BTN0 MTND5P5-201ENST00000503764 376 ntBASIC4.45□□□□□ -1.7
LRFN3Q9BTN0 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC4.45□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 115.6 ms