Protein–RNA interactions for Protein: Q9BRP4

PAAF1, Proteasomal ATPase-associated factor 1, humanhuman

Predictions only

Length 392 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1Q9BRP4 AC010546.1-201ENST00000569391 485 ntBASIC4.05□□□□□ -1.76
PAAF1Q9BRP4 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC4.05□□□□□ -1.76
PAAF1Q9BRP4 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC4.05□□□□□ -1.76
PAAF1Q9BRP4 AC233280.2-201ENST00000603917 1070 ntBASIC4.05□□□□□ -1.76
PAAF1Q9BRP4 AL365503.1-201ENST00000605247 905 ntBASIC4.05□□□□□ -1.76
PAAF1Q9BRP4 HMGN2P28-201ENST00000606102 262 ntBASIC4.05□□□□□ -1.76
PAAF1Q9BRP4 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
PAAF1Q9BRP4 AC002550.2-201ENST00000621246 394 ntBASIC4.05□□□□□ -1.76
PAAF1Q9BRP4 PISRT1-201ENST00000626175 531 ntBASIC4.05□□□□□ -1.76
PAAF1Q9BRP4 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC4.05□□□□□ -1.76
PAAF1Q9BRP4 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.05□□□□□ -1.76
PAAF1Q9BRP4 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC4.05□□□□□ -1.76
PAAF1Q9BRP4 MTND5P33-201ENST00000571250 1450 ntBASIC4.05□□□□□ -1.76
PAAF1Q9BRP4 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
PAAF1Q9BRP4 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
PAAF1Q9BRP4 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
PAAF1Q9BRP4 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.04□□□□□ -1.76
PAAF1Q9BRP4 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
PAAF1Q9BRP4 SCN1A-220ENST00000641603 12506 ntBASIC4.04□□□□□ -1.76
PAAF1Q9BRP4 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC4.04□□□□□ -1.76
PAAF1Q9BRP4 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC4.04□□□□□ -1.76
PAAF1Q9BRP4 RNU6-1078P-201ENST00000364522 103 ntBASIC4.04□□□□□ -1.76
PAAF1Q9BRP4 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
PAAF1Q9BRP4 Y_RNA.582-201ENST00000391023 95 ntBASIC4.04□□□□□ -1.76
PAAF1Q9BRP4 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
PAAF1Q9BRP4 CYCSP43-201ENST00000438233 310 ntBASIC4.04□□□□□ -1.76
PAAF1Q9BRP4 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
PAAF1Q9BRP4 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC4.04□□□□□ -1.76
PAAF1Q9BRP4 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC4.04□□□□□ -1.76
PAAF1Q9BRP4 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC4.04□□□□□ -1.76
PAAF1Q9BRP4 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC4.04□□□□□ -1.76
PAAF1Q9BRP4 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC4.04□□□□□ -1.76
PAAF1Q9BRP4 SNORD121B-201ENST00000458838 81 ntBASIC4.04□□□□□ -1.76
PAAF1Q9BRP4 SNORD108-201ENST00000459332 71 ntBASIC4.04□□□□□ -1.76
PAAF1Q9BRP4 RPS3AP17-201ENST00000472594 777 ntBASIC4.04□□□□□ -1.76
PAAF1Q9BRP4 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC4.04□□□□□ -1.76
PAAF1Q9BRP4 AC026726.1-201ENST00000512859 601 ntBASIC4.04□□□□□ -1.76
PAAF1Q9BRP4 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC4.04□□□□□ -1.76
PAAF1Q9BRP4 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC4.04□□□□□ -1.76
PAAF1Q9BRP4 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC4.04□□□□□ -1.76
PAAF1Q9BRP4 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC4.04□□□□□ -1.76
PAAF1Q9BRP4 AP003497.1-201ENST00000528472 562 ntBASIC4.04□□□□□ -1.76
PAAF1Q9BRP4 SMILR-201ENST00000533992 553 ntTSL 4 BASIC4.04□□□□□ -1.76
PAAF1Q9BRP4 EIF1P4-201ENST00000572664 335 ntBASIC4.04□□□□□ -1.76
PAAF1Q9BRP4 DUXAP4-201ENST00000603046 613 ntBASIC4.04□□□□□ -1.76
PAAF1Q9BRP4 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC4.04□□□□□ -1.76
PAAF1Q9BRP4 AL161734.1-201ENST00000609720 557 ntBASIC4.04□□□□□ -1.76
PAAF1Q9BRP4 TUG1_1.1-201ENST00000610654 145 ntBASIC4.04□□□□□ -1.76
PAAF1Q9BRP4 AC090970.3-201ENST00000612566 866 ntBASIC4.04□□□□□ -1.76
PAAF1Q9BRP4 AL356585.4-201ENST00000623078 1229 ntBASIC4.04□□□□□ -1.76
PAAF1Q9BRP4 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
PAAF1Q9BRP4 AC009902.3-201ENST00000606235 2172 ntBASIC4.04□□□□□ -1.76
PAAF1Q9BRP4 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC4.04□□□□□ -1.76
PAAF1Q9BRP4 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC4.04□□□□□ -1.76
PAAF1Q9BRP4 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
PAAF1Q9BRP4 AC244517.1-201ENST00000606030 2086 ntBASIC4.03□□□□□ -1.76
PAAF1Q9BRP4 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC4.03□□□□□ -1.76
PAAF1Q9BRP4 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
PAAF1Q9BRP4 RNU6-712P-201ENST00000410558 100 ntBASIC4.03□□□□□ -1.76
PAAF1Q9BRP4 RNU6-195P-201ENST00000411352 109 ntBASIC4.03□□□□□ -1.76
PAAF1Q9BRP4 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
PAAF1Q9BRP4 AL137014.1-201ENST00000420490 1226 ntBASIC4.03□□□□□ -1.76
PAAF1Q9BRP4 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC4.03□□□□□ -1.76
PAAF1Q9BRP4 AC011742.1-201ENST00000431448 434 ntBASIC4.03□□□□□ -1.76
PAAF1Q9BRP4 AC119618.1-201ENST00000434191 222 ntBASIC4.03□□□□□ -1.76
PAAF1Q9BRP4 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC4.03□□□□□ -1.76
PAAF1Q9BRP4 MTND1P9-201ENST00000453775 944 ntBASIC4.03□□□□□ -1.76
PAAF1Q9BRP4 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC4.03□□□□□ -1.76
PAAF1Q9BRP4 AC084198.1-201ENST00000477747 402 ntBASIC4.03□□□□□ -1.76
PAAF1Q9BRP4 AC106707.2-201ENST00000484182 374 ntBASIC4.03□□□□□ -1.76
PAAF1Q9BRP4 AC107401.1-201ENST00000503426 685 ntBASIC4.03□□□□□ -1.76
PAAF1Q9BRP4 MTND2P33-201ENST00000506452 1031 ntBASIC4.03□□□□□ -1.76
PAAF1Q9BRP4 RPL37P25-201ENST00000507308 276 ntBASIC4.03□□□□□ -1.76
PAAF1Q9BRP4 HMGN1P11-201ENST00000508668 303 ntBASIC4.03□□□□□ -1.76
PAAF1Q9BRP4 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC4.03□□□□□ -1.76
PAAF1Q9BRP4 AC017037.2-201ENST00000513850 890 ntBASIC4.03□□□□□ -1.76
PAAF1Q9BRP4 RNU6-528P-201ENST00000516926 100 ntBASIC4.03□□□□□ -1.76
PAAF1Q9BRP4 RNU2-46P-201ENST00000517038 113 ntBASIC4.03□□□□□ -1.76
PAAF1Q9BRP4 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC4.03□□□□□ -1.76
PAAF1Q9BRP4 IGKV2D-19-201ENST00000523346 262 ntBASIC4.03□□□□□ -1.76
PAAF1Q9BRP4 AP003122.4-201ENST00000530980 758 ntBASIC4.03□□□□□ -1.76
PAAF1Q9BRP4 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC4.03□□□□□ -1.76
PAAF1Q9BRP4 AC126177.3-201ENST00000551839 688 ntBASIC4.03□□□□□ -1.76
PAAF1Q9BRP4 AC090877.1-201ENST00000561418 344 ntBASIC4.03□□□□□ -1.76
PAAF1Q9BRP4 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC4.03□□□□□ -1.76
PAAF1Q9BRP4 AL356432.3-201ENST00000568952 465 ntBASIC4.03□□□□□ -1.76
PAAF1Q9BRP4 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC4.03□□□□□ -1.76
PAAF1Q9BRP4 AC099489.2-201ENST00000574976 260 ntBASIC4.03□□□□□ -1.76
PAAF1Q9BRP4 NRBF2P1-201ENST00000587407 859 ntBASIC4.03□□□□□ -1.76
PAAF1Q9BRP4 AC012468.1-201ENST00000604888 430 ntBASIC4.03□□□□□ -1.76
PAAF1Q9BRP4 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC4.03□□□□□ -1.76
PAAF1Q9BRP4 AL021997.1-201ENST00000605757 193 ntBASIC4.03□□□□□ -1.76
PAAF1Q9BRP4 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
PAAF1Q9BRP4 OR5AK4P-201ENST00000635912 903 ntBASIC4.03□□□□□ -1.76
PAAF1Q9BRP4 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC4.03□□□□□ -1.76
PAAF1Q9BRP4 AC099654.12-201ENST00000639868 649 ntBASIC4.03□□□□□ -1.76
PAAF1Q9BRP4 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.03□□□□□ -1.76
PAAF1Q9BRP4 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
PAAF1Q9BRP4 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.03□□□□□ -1.76
PAAF1Q9BRP4 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC4.03□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 97 ms