Protein–RNA interactions for Protein: Q99958

FOXC2, Forkhead box protein C2, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXC2Q99958 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC2.64□□□□□ -1.99
FOXC2Q99958 SSXP9-201ENST00000417503 292 ntBASIC2.64□□□□□ -1.99
FOXC2Q99958 DPPA2P1-201ENST00000428060 556 ntBASIC2.64□□□□□ -1.99
FOXC2Q99958 PSMA6P3-201ENST00000428242 164 ntBASIC2.64□□□□□ -1.99
FOXC2Q99958 FTH1P1-201ENST00000437933 532 ntBASIC2.64□□□□□ -1.99
FOXC2Q99958 AL135938.1-201ENST00000443141 297 ntBASIC2.64□□□□□ -1.99
FOXC2Q99958 RPL7P36-201ENST00000444633 681 ntBASIC2.64□□□□□ -1.99
FOXC2Q99958 AL590664.1-201ENST00000448065 339 ntBASIC2.64□□□□□ -1.99
FOXC2Q99958 AL513124.1-201ENST00000450410 614 ntBASIC2.64□□□□□ -1.99
FOXC2Q99958 RFC5P1-201ENST00000454419 874 ntBASIC2.64□□□□□ -1.99
FOXC2Q99958 RPS4XP2-201ENST00000458402 793 ntBASIC2.64□□□□□ -1.99
FOXC2Q99958 APOA2-205ENST00000468465 421 ntTSL 2 BASIC2.64□□□□□ -1.99
FOXC2Q99958 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC2.64□□□□□ -1.99
FOXC2Q99958 TRBV12-1-201ENST00000479785 344 ntBASIC2.64□□□□□ -1.99
FOXC2Q99958 AC006483.1-201ENST00000487308 313 ntBASIC2.64□□□□□ -1.99
FOXC2Q99958 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC2.64□□□□□ -1.99
FOXC2Q99958 FABP5P12-201ENST00000515543 389 ntBASIC2.64□□□□□ -1.99
FOXC2Q99958 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC2.64□□□□□ -1.99
FOXC2Q99958 COX6CP8-201ENST00000522620 226 ntBASIC2.64□□□□□ -1.99
FOXC2Q99958 CYB5AP5-201ENST00000549779 389 ntBASIC2.64□□□□□ -1.99
FOXC2Q99958 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC2.64□□□□□ -1.99
FOXC2Q99958 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC2.64□□□□□ -1.99
FOXC2Q99958 AC126365.2-201ENST00000580630 379 ntBASIC2.64□□□□□ -1.99
FOXC2Q99958 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC2.64□□□□□ -1.99
FOXC2Q99958 BNIP3P38-201ENST00000601117 544 ntBASIC2.64□□□□□ -1.99
FOXC2Q99958 KC877982.1-201ENST00000602313 470 ntBASIC2.64□□□□□ -1.99
FOXC2Q99958 AC012443.1-201ENST00000605605 231 ntBASIC2.64□□□□□ -1.99
FOXC2Q99958 AP002802.2-201ENST00000605877 235 ntBASIC2.64□□□□□ -1.99
FOXC2Q99958 AC087241.4-201ENST00000612441 480 ntBASIC2.64□□□□□ -1.99
FOXC2Q99958 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC2.64□□□□□ -1.99
FOXC2Q99958 AL138880.2-201ENST00000616214 239 ntBASIC2.64□□□□□ -1.99
FOXC2Q99958 AC231759.1-201ENST00000616455 597 ntBASIC2.64□□□□□ -1.99
FOXC2Q99958 AL049777.1-201ENST00000622740 518 ntBASIC2.64□□□□□ -1.99
FOXC2Q99958 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC2.64□□□□□ -1.99
FOXC2Q99958 AP003122.6-201ENST00000623831 495 ntBASIC2.64□□□□□ -1.99
FOXC2Q99958 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC2.64□□□□□ -1.99
FOXC2Q99958 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.64□□□□□ -1.99
FOXC2Q99958 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
FOXC2Q99958 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
FOXC2Q99958 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.64□□□□□ -1.99
FOXC2Q99958 AC007496.3-201ENST00000624987 3443 ntBASIC2.64□□□□□ -1.99
FOXC2Q99958 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
FOXC2Q99958 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC2.63□□□□□ -1.99
FOXC2Q99958 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC2.63□□□□□ -1.99
FOXC2Q99958 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
FOXC2Q99958 GABRG2-229ENST00000641017 3628 ntBASIC2.63□□□□□ -1.99
FOXC2Q99958 OR56A5-201ENST00000340110 738 ntBASIC2.63□□□□□ -1.99
FOXC2Q99958 RNU6-657P-201ENST00000383904 107 ntBASIC2.63□□□□□ -1.99
FOXC2Q99958 RNU6-1300P-201ENST00000391046 108 ntBASIC2.63□□□□□ -1.99
FOXC2Q99958 RPS4XP3-201ENST00000398541 413 ntBASIC2.63□□□□□ -1.99
FOXC2Q99958 RSL24D1P4-201ENST00000400938 484 ntBASIC2.63□□□□□ -1.99
FOXC2Q99958 RNA5SP107-201ENST00000411358 122 ntBASIC2.63□□□□□ -1.99
FOXC2Q99958 RPS7P13-201ENST00000413955 498 ntBASIC2.63□□□□□ -1.99
FOXC2Q99958 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC2.63□□□□□ -1.99
FOXC2Q99958 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC2.63□□□□□ -1.99
FOXC2Q99958 AC063976.3-201ENST00000426849 329 ntBASIC2.63□□□□□ -1.99
FOXC2Q99958 AC092634.2-201ENST00000428146 1010 ntBASIC2.63□□□□□ -1.99
FOXC2Q99958 EZH2P1-201ENST00000431167 291 ntBASIC2.63□□□□□ -1.99
FOXC2Q99958 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC2.63□□□□□ -1.99
FOXC2Q99958 AC092393.1-201ENST00000439625 742 ntBASIC2.63□□□□□ -1.99
FOXC2Q99958 ZNF736P1Y-201ENST00000440402 1276 ntBASIC2.63□□□□□ -1.99
FOXC2Q99958 AC125238.1-201ENST00000448842 249 ntBASIC2.63□□□□□ -1.99
FOXC2Q99958 USP9YP34-201ENST00000453983 808 ntBASIC2.63□□□□□ -1.99
FOXC2Q99958 Z82190.1-201ENST00000454534 490 ntBASIC2.63□□□□□ -1.99
FOXC2Q99958 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC2.63□□□□□ -1.99
FOXC2Q99958 RPS27P29-201ENST00000463110 252 ntBASIC2.63□□□□□ -1.99
FOXC2Q99958 AP002884.2-201ENST00000471647 395 ntBASIC2.63□□□□□ -1.99
FOXC2Q99958 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC2.63□□□□□ -1.99
FOXC2Q99958 TXNP6-201ENST00000510190 310 ntBASIC2.63□□□□□ -1.99
FOXC2Q99958 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
FOXC2Q99958 AP001636.2-201ENST00000525517 696 ntBASIC2.63□□□□□ -1.99
FOXC2Q99958 AHI1-217ENST00000534469 680 ntTSL 3 BASIC2.63□□□□□ -1.99
FOXC2Q99958 CD69-203ENST00000536709 1020 ntTSL 2 BASIC2.63□□□□□ -1.99
FOXC2Q99958 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC2.63□□□□□ -1.99
FOXC2Q99958 SETP7-201ENST00000552169 453 ntBASIC2.63□□□□□ -1.99
FOXC2Q99958 AC091544.4-201ENST00000555268 342 ntBASIC2.63□□□□□ -1.99
FOXC2Q99958 AC104072.1-201ENST00000568817 668 ntBASIC2.63□□□□□ -1.99
FOXC2Q99958 LARP7P2-201ENST00000575306 125 ntBASIC2.63□□□□□ -1.99
FOXC2Q99958 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC2.63□□□□□ -1.99
FOXC2Q99958 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC2.63□□□□□ -1.99
FOXC2Q99958 AL022099.1-201ENST00000604551 712 ntBASIC2.63□□□□□ -1.99
FOXC2Q99958 ATP1B3P1-201ENST00000605365 821 ntBASIC2.63□□□□□ -1.99
FOXC2Q99958 AC018645.2-201ENST00000609151 472 ntBASIC2.63□□□□□ -1.99
FOXC2Q99958 AC124016.2-201ENST00000610058 665 ntBASIC2.63□□□□□ -1.99
FOXC2Q99958 AC091046.2-201ENST00000620775 665 ntBASIC2.63□□□□□ -1.99
FOXC2Q99958 AC022149.2-201ENST00000621061 203 ntBASIC2.63□□□□□ -1.99
FOXC2Q99958 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC2.63□□□□□ -1.99
FOXC2Q99958 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
FOXC2Q99958 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
FOXC2Q99958 RNU6-805P-201ENST00000365643 106 ntBASIC2.62□□□□□ -1.99
FOXC2Q99958 RNU6-851P-201ENST00000384565 107 ntBASIC2.62□□□□□ -1.99
FOXC2Q99958 MIR493-201ENST00000385254 89 ntBASIC2.62□□□□□ -1.99
FOXC2Q99958 MCTS2P-201ENST00000394552 546 ntBASIC2.62□□□□□ -1.99
FOXC2Q99958 AC069282.1-201ENST00000411911 526 ntBASIC2.62□□□□□ -1.99
FOXC2Q99958 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC2.62□□□□□ -1.99
FOXC2Q99958 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC2.62□□□□□ -1.99
FOXC2Q99958 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC2.62□□□□□ -1.99
FOXC2Q99958 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC2.62□□□□□ -1.99
FOXC2Q99958 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC2.62□□□□□ -1.99
FOXC2Q99958 AC016696.1-201ENST00000446949 318 ntBASIC2.62□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 109 ms