Protein–RNA interactions for Protein: Q99909

SSX3, Protein SSX3, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3Q99909 AL445584.1-201ENST00000431451 330 ntBASIC3.12□□□□□ -1.91
SSX3Q99909 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.12□□□□□ -1.91
SSX3Q99909 AL117351.1-201ENST00000438864 766 ntBASIC3.12□□□□□ -1.91
SSX3Q99909 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC3.12□□□□□ -1.91
SSX3Q99909 RPS29P31-201ENST00000446147 164 ntBASIC3.12□□□□□ -1.91
SSX3Q99909 AC104978.1-201ENST00000449387 391 ntBASIC3.12□□□□□ -1.91
SSX3Q99909 AP001025.2-201ENST00000490908 477 ntBASIC3.12□□□□□ -1.91
SSX3Q99909 RPL7P23-201ENST00000493874 747 ntBASIC3.12□□□□□ -1.91
SSX3Q99909 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC3.12□□□□□ -1.91
SSX3Q99909 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC3.12□□□□□ -1.91
SSX3Q99909 AC093809.1-201ENST00000509155 340 ntBASIC3.12□□□□□ -1.91
SSX3Q99909 AC109464.2-201ENST00000510242 943 ntBASIC3.12□□□□□ -1.91
SSX3Q99909 AC034159.1-201ENST00000513885 583 ntBASIC3.12□□□□□ -1.91
SSX3Q99909 MTND5P4-201ENST00000514978 288 ntBASIC3.12□□□□□ -1.91
SSX3Q99909 AC087369.1-201ENST00000520775 996 ntBASIC3.12□□□□□ -1.91
SSX3Q99909 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC3.12□□□□□ -1.91
SSX3Q99909 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
SSX3Q99909 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC3.12□□□□□ -1.91
SSX3Q99909 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.12□□□□□ -1.91
SSX3Q99909 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC3.12□□□□□ -1.91
SSX3Q99909 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC3.12□□□□□ -1.91
SSX3Q99909 AC011260.1-201ENST00000578420 472 ntBASIC3.12□□□□□ -1.91
SSX3Q99909 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC3.12□□□□□ -1.91
SSX3Q99909 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.12□□□□□ -1.91
SSX3Q99909 AC245389.1-201ENST00000605141 529 ntBASIC3.12□□□□□ -1.91
SSX3Q99909 AP000254.1-201ENST00000609934 520 ntBASIC3.12□□□□□ -1.91
SSX3Q99909 AC019176.2-201ENST00000611579 315 ntBASIC3.12□□□□□ -1.91
SSX3Q99909 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
SSX3Q99909 AC073530.2-201ENST00000623987 261 ntBASIC3.12□□□□□ -1.91
SSX3Q99909 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.12□□□□□ -1.91
SSX3Q99909 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC3.12□□□□□ -1.91
SSX3Q99909 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
SSX3Q99909 AC104454.1-201ENST00000421341 1401 ntBASIC3.11□□□□□ -1.91
SSX3Q99909 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
SSX3Q99909 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC3.11□□□□□ -1.91
SSX3Q99909 AC092447.10-201ENST00000620607 1652 ntBASIC3.11□□□□□ -1.91
SSX3Q99909 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
SSX3Q99909 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
SSX3Q99909 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
SSX3Q99909 Y_RNA.548-201ENST00000384656 105 ntBASIC3.11□□□□□ -1.91
SSX3Q99909 MIR23B-201ENST00000384832 97 ntBASIC3.11□□□□□ -1.91
SSX3Q99909 MTND4P13-201ENST00000402078 1023 ntBASIC3.11□□□□□ -1.91
SSX3Q99909 RPS3AP24-201ENST00000407896 734 ntBASIC3.11□□□□□ -1.91
SSX3Q99909 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
SSX3Q99909 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC3.11□□□□□ -1.91
SSX3Q99909 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC3.11□□□□□ -1.91
SSX3Q99909 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC3.11□□□□□ -1.91
SSX3Q99909 BX842559.1-201ENST00000419615 532 ntBASIC3.11□□□□□ -1.91
SSX3Q99909 RPL27AP8-201ENST00000424277 446 ntBASIC3.11□□□□□ -1.91
SSX3Q99909 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC3.11□□□□□ -1.91
SSX3Q99909 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC3.11□□□□□ -1.91
SSX3Q99909 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.11□□□□□ -1.91
SSX3Q99909 LSM1P1-201ENST00000438629 273 ntBASIC3.11□□□□□ -1.91
SSX3Q99909 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC3.11□□□□□ -1.91
SSX3Q99909 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC3.11□□□□□ -1.91
SSX3Q99909 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC3.11□□□□□ -1.91
SSX3Q99909 SNORD121B-201ENST00000458838 81 ntBASIC3.11□□□□□ -1.91
SSX3Q99909 AL049714.1-201ENST00000466686 347 ntBASIC3.11□□□□□ -1.91
SSX3Q99909 RPL32P34-201ENST00000486380 400 ntBASIC3.11□□□□□ -1.91
SSX3Q99909 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
SSX3Q99909 AC118282.1-201ENST00000506408 765 ntBASIC3.11□□□□□ -1.91
SSX3Q99909 AC006445.2-201ENST00000510061 472 ntBASIC3.11□□□□□ -1.91
SSX3Q99909 AL359273.1-201ENST00000510918 627 ntBASIC3.11□□□□□ -1.91
SSX3Q99909 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC3.11□□□□□ -1.91
SSX3Q99909 RNA5SP164-201ENST00000516533 110 ntBASIC3.11□□□□□ -1.91
SSX3Q99909 RNA5SP380-201ENST00000517190 98 ntBASIC3.11□□□□□ -1.91
SSX3Q99909 AC022695.1-201ENST00000522089 237 ntBASIC3.11□□□□□ -1.91
SSX3Q99909 AC008489.1-201ENST00000524271 483 ntBASIC3.11□□□□□ -1.91
SSX3Q99909 ELOCP32-201ENST00000548625 324 ntBASIC3.11□□□□□ -1.91
SSX3Q99909 AC090888.2-201ENST00000559765 1144 ntBASIC3.11□□□□□ -1.91
SSX3Q99909 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC3.11□□□□□ -1.91
SSX3Q99909 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC3.11□□□□□ -1.91
SSX3Q99909 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC3.11□□□□□ -1.91
SSX3Q99909 BRDTP1-201ENST00000605735 677 ntBASIC3.11□□□□□ -1.91
SSX3Q99909 AC024560.3-201ENST00000608482 349 ntBASIC3.11□□□□□ -1.91
SSX3Q99909 AC006133.1-201ENST00000617106 264 ntBASIC3.11□□□□□ -1.91
SSX3Q99909 AC009159.2-201ENST00000617603 606 ntBASIC3.11□□□□□ -1.91
SSX3Q99909 DLEU1_2.1-201ENST00000617920 342 ntBASIC3.11□□□□□ -1.91
SSX3Q99909 CR392039.5-201ENST00000623201 510 ntBASIC3.11□□□□□ -1.91
SSX3Q99909 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
SSX3Q99909 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
SSX3Q99909 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.11□□□□□ -1.91
SSX3Q99909 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.11□□□□□ -1.91
SSX3Q99909 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.1□□□□□ -1.91
SSX3Q99909 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
SSX3Q99909 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
SSX3Q99909 FAM35CP-201ENST00000554755 2470 ntBASIC3.1□□□□□ -1.91
SSX3Q99909 AC012321.1-201ENST00000561622 1588 ntBASIC3.1□□□□□ -1.91
SSX3Q99909 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
SSX3Q99909 DEFB108F-201ENST00000344638 222 ntBASIC3.1□□□□□ -1.91
SSX3Q99909 RNA5SP88-201ENST00000365560 109 ntBASIC3.1□□□□□ -1.91
SSX3Q99909 MIR200C-201ENST00000384980 68 ntBASIC3.1□□□□□ -1.91
SSX3Q99909 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
SSX3Q99909 ATP5F1P3-201ENST00000397213 657 ntBASIC3.1□□□□□ -1.91
SSX3Q99909 AC119751.3-201ENST00000399720 670 ntBASIC3.1□□□□□ -1.91
SSX3Q99909 SKINT1L-201ENST00000401057 817 ntBASIC3.1□□□□□ -1.91
SSX3Q99909 HSPE1P8-201ENST00000406997 288 ntBASIC3.1□□□□□ -1.91
SSX3Q99909 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
SSX3Q99909 AC098592.1-201ENST00000419352 333 ntBASIC3.1□□□□□ -1.91
SSX3Q99909 AL139247.1-201ENST00000422768 325 ntBASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 94.8 ms