Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 RNU6-707P-201ENST00000364647 95 ntBASIC2.51□□□□□ -2.01
ABCA3Q99758 MIR1294-201ENST00000408503 142 ntBASIC2.51□□□□□ -2.01
ABCA3Q99758 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC2.51□□□□□ -2.01
ABCA3Q99758 AL451074.3-201ENST00000437709 472 ntBASIC2.51□□□□□ -2.01
ABCA3Q99758 RPS29P12-201ENST00000460178 152 ntBASIC2.51□□□□□ -2.01
ABCA3Q99758 MLLT10P2-201ENST00000506434 249 ntBASIC2.51□□□□□ -2.01
ABCA3Q99758 C1GALT1P2-201ENST00000510813 1104 ntBASIC2.51□□□□□ -2.01
ABCA3Q99758 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC2.51□□□□□ -2.01
ABCA3Q99758 CD69-203ENST00000536709 1020 ntTSL 2 BASIC2.51□□□□□ -2.01
ABCA3Q99758 AC004486.1-201ENST00000546846 233 ntBASIC2.51□□□□□ -2.01
ABCA3Q99758 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC2.51□□□□□ -2.01
ABCA3Q99758 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC2.51□□□□□ -2.01
ABCA3Q99758 AC131902.3-201ENST00000611767 581 ntBASIC2.51□□□□□ -2.01
ABCA3Q99758 RMST_2.1-201ENST00000617263 136 ntBASIC2.51□□□□□ -2.01
ABCA3Q99758 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC2.51□□□□□ -2.01
ABCA3Q99758 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
ABCA3Q99758 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC2.51□□□□□ -2.01
ABCA3Q99758 AC104332.2-201ENST00000429959 156 ntBASIC2.51□□□□□ -2.01
ABCA3Q99758 NAP1L4P3-201ENST00000432820 1147 ntBASIC2.51□□□□□ -2.01
ABCA3Q99758 AC104308.1-201ENST00000454621 333 ntBASIC2.51□□□□□ -2.01
ABCA3Q99758 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
ABCA3Q99758 SNORA25.15-201ENST00000516487 89 ntBASIC2.51□□□□□ -2.01
ABCA3Q99758 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC2.51□□□□□ -2.01
ABCA3Q99758 AC060766.3-201ENST00000591442 263 ntBASIC2.51□□□□□ -2.01
ABCA3Q99758 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC2.5□□□□□ -2.01
ABCA3Q99758 RNU6-225P-201ENST00000384613 103 ntBASIC2.5□□□□□ -2.01
ABCA3Q99758 USP9YP6-201ENST00000413550 854 ntBASIC2.5□□□□□ -2.01
ABCA3Q99758 Z73417.1-201ENST00000447373 778 ntBASIC2.5□□□□□ -2.01
ABCA3Q99758 USP9YP34-201ENST00000453983 808 ntBASIC2.5□□□□□ -2.01
ABCA3Q99758 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC2.5□□□□□ -2.01
ABCA3Q99758 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC2.5□□□□□ -2.01
ABCA3Q99758 AC010678.1-201ENST00000614118 713 ntBASIC2.5□□□□□ -2.01
ABCA3Q99758 AC244517.1-201ENST00000606030 2086 ntBASIC2.5□□□□□ -2.01
ABCA3Q99758 AC006378.2-201ENST00000623178 2476 ntBASIC2.5□□□□□ -2.01
ABCA3Q99758 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.5□□□□□ -2.01
ABCA3Q99758 MIR1323-201ENST00000408090 73 ntBASIC2.49□□□□□ -2.01
ABCA3Q99758 AC090543.1-201ENST00000492168 485 ntBASIC2.49□□□□□ -2.01
ABCA3Q99758 TBCAP3-201ENST00000512475 312 ntBASIC2.49□□□□□ -2.01
ABCA3Q99758 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.49□□□□□ -2.01
ABCA3Q99758 RNU6-347P-201ENST00000516658 105 ntBASIC2.49□□□□□ -2.01
ABCA3Q99758 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC2.49□□□□□ -2.01
ABCA3Q99758 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC2.49□□□□□ -2.01
ABCA3Q99758 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC2.49□□□□□ -2.01
ABCA3Q99758 AC073387.2-201ENST00000604797 784 ntBASIC2.49□□□□□ -2.01
ABCA3Q99758 AL353748.2-201ENST00000622148 471 ntBASIC2.49□□□□□ -2.01
ABCA3Q99758 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.49□□□□□ -2.01
ABCA3Q99758 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
ABCA3Q99758 RNA5SP105-201ENST00000391123 113 ntBASIC2.48□□□□□ -2.01
ABCA3Q99758 RNU2-68P-201ENST00000410878 191 ntBASIC2.48□□□□□ -2.01
ABCA3Q99758 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC2.48□□□□□ -2.01
ABCA3Q99758 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC2.48□□□□□ -2.01
ABCA3Q99758 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC2.48□□□□□ -2.01
ABCA3Q99758 RPL5P13-201ENST00000462840 709 ntBASIC2.48□□□□□ -2.01
ABCA3Q99758 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC2.48□□□□□ -2.01
ABCA3Q99758 AC138649.5-201ENST00000637456 137 ntBASIC2.48□□□□□ -2.01
ABCA3Q99758 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.48□□□□□ -2.01
ABCA3Q99758 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC2.48□□□□□ -2.01
ABCA3Q99758 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC2.48□□□□□ -2.01
ABCA3Q99758 MIR613-201ENST00000385248 95 ntBASIC2.48□□□□□ -2.01
ABCA3Q99758 AC073310.1-201ENST00000423226 1033 ntBASIC2.48□□□□□ -2.01
ABCA3Q99758 RPL7P46-201ENST00000425129 740 ntBASIC2.48□□□□□ -2.01
ABCA3Q99758 HMGN2P20-201ENST00000437531 273 ntBASIC2.48□□□□□ -2.01
ABCA3Q99758 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC2.48□□□□□ -2.01
ABCA3Q99758 MOB1AP2-201ENST00000446060 614 ntBASIC2.48□□□□□ -2.01
ABCA3Q99758 RPL23AP20-201ENST00000447965 421 ntBASIC2.48□□□□□ -2.01
ABCA3Q99758 RPL23AP7-203ENST00000449021 469 ntBASIC2.48□□□□□ -2.01
ABCA3Q99758 CDC42P1-201ENST00000456658 548 ntBASIC2.48□□□□□ -2.01
ABCA3Q99758 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC2.48□□□□□ -2.01
ABCA3Q99758 AC011352.3-201ENST00000505162 593 ntBASIC2.48□□□□□ -2.01
ABCA3Q99758 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC2.48□□□□□ -2.01
ABCA3Q99758 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
ABCA3Q99758 MIR5089-201ENST00000580047 84 ntBASIC2.48□□□□□ -2.01
ABCA3Q99758 AC012360.2-201ENST00000609349 391 ntBASIC2.48□□□□□ -2.01
ABCA3Q99758 MIR6504-201ENST00000613520 61 ntBASIC2.48□□□□□ -2.01
ABCA3Q99758 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2.48□□□□□ -2.01
ABCA3Q99758 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC2.48□□□□□ -2.01
ABCA3Q99758 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.47□□□□□ -2.01
ABCA3Q99758 Z82209.1-201ENST00000422141 2135 ntBASIC2.47□□□□□ -2.01
ABCA3Q99758 Y_RNA.191-201ENST00000363972 113 ntBASIC2.47□□□□□ -2.01
ABCA3Q99758 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.47□□□□□ -2.01
ABCA3Q99758 RPL39P40-201ENST00000445481 146 ntBASIC2.47□□□□□ -2.01
ABCA3Q99758 BX322784.1-201ENST00000455793 1077 ntBASIC2.47□□□□□ -2.01
ABCA3Q99758 AC092798.1-201ENST00000458542 409 ntBASIC2.47□□□□□ -2.01
ABCA3Q99758 AC104472.2-201ENST00000469035 601 ntBASIC2.47□□□□□ -2.01
ABCA3Q99758 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
ABCA3Q99758 AC023050.1-201ENST00000498198 304 ntBASIC2.47□□□□□ -2.01
ABCA3Q99758 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC2.47□□□□□ -2.01
ABCA3Q99758 AC087241.2-201ENST00000535801 324 ntBASIC2.47□□□□□ -2.01
ABCA3Q99758 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC2.47□□□□□ -2.01
ABCA3Q99758 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC2.47□□□□□ -2.01
ABCA3Q99758 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
ABCA3Q99758 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
ABCA3Q99758 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC2.46□□□□□ -2.02
ABCA3Q99758 RNU4-7P-201ENST00000364758 141 ntBASIC2.46□□□□□ -2.02
ABCA3Q99758 AC019129.1-201ENST00000403786 261 ntBASIC2.46□□□□□ -2.02
ABCA3Q99758 AL589994.1-201ENST00000404962 340 ntBASIC2.46□□□□□ -2.02
ABCA3Q99758 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC2.46□□□□□ -2.02
ABCA3Q99758 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC2.46□□□□□ -2.02
ABCA3Q99758 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC2.46□□□□□ -2.02
ABCA3Q99758 RPS15AP1-201ENST00000457423 391 ntBASIC2.46□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 96.1 ms