Protein–RNA interactions for Protein: Q99743

NPAS2, Neuronal PAS domain-containing protein 2, humanhuman

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS2Q99743 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC2.97□□□□□ -1.93
NPAS2Q99743 OR4K6P-201ENST00000416478 897 ntBASIC2.97□□□□□ -1.93
NPAS2Q99743 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC2.97□□□□□ -1.93
NPAS2Q99743 AL353678.1-201ENST00000422735 741 ntBASIC2.97□□□□□ -1.93
NPAS2Q99743 ZDHHC20P2-201ENST00000424108 429 ntBASIC2.97□□□□□ -1.93
NPAS2Q99743 DPPA2P1-201ENST00000428060 556 ntBASIC2.97□□□□□ -1.93
NPAS2Q99743 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC2.97□□□□□ -1.93
NPAS2Q99743 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC2.97□□□□□ -1.93
NPAS2Q99743 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC2.97□□□□□ -1.93
NPAS2Q99743 USP9YP22-201ENST00000438971 294 ntBASIC2.97□□□□□ -1.93
NPAS2Q99743 AC092427.1-201ENST00000439177 601 ntBASIC2.97□□□□□ -1.93
NPAS2Q99743 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC2.97□□□□□ -1.93
NPAS2Q99743 RAC1P7-201ENST00000445367 377 ntBASIC2.97□□□□□ -1.93
NPAS2Q99743 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC2.97□□□□□ -1.93
NPAS2Q99743 OFD1P3Y-201ENST00000453312 783 ntBASIC2.97□□□□□ -1.93
NPAS2Q99743 MTND2P39-201ENST00000457230 764 ntBASIC2.97□□□□□ -1.93
NPAS2Q99743 AP001992.1-205ENST00000462248 379 ntBASIC2.97□□□□□ -1.93
NPAS2Q99743 RN7SL863P-201ENST00000462370 296 ntBASIC2.97□□□□□ -1.93
NPAS2Q99743 AC104472.2-201ENST00000469035 601 ntBASIC2.97□□□□□ -1.93
NPAS2Q99743 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC2.97□□□□□ -1.93
NPAS2Q99743 RPS3AP43-201ENST00000479743 781 ntBASIC2.97□□□□□ -1.93
NPAS2Q99743 AC108860.1-201ENST00000484521 383 ntBASIC2.97□□□□□ -1.93
NPAS2Q99743 OR4G11P-201ENST00000492842 939 ntBASIC2.97□□□□□ -1.93
NPAS2Q99743 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC2.97□□□□□ -1.93
NPAS2Q99743 MTCYBP16-201ENST00000509187 1129 ntBASIC2.97□□□□□ -1.93
NPAS2Q99743 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC2.97□□□□□ -1.93
NPAS2Q99743 RNA5SP385-201ENST00000515947 110 ntBASIC2.97□□□□□ -1.93
NPAS2Q99743 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC2.97□□□□□ -1.93
NPAS2Q99743 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC2.97□□□□□ -1.93
NPAS2Q99743 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
NPAS2Q99743 AC106782.4-201ENST00000568264 210 ntBASIC2.97□□□□□ -1.93
NPAS2Q99743 MIR4325-201ENST00000583049 90 ntBASIC2.97□□□□□ -1.93
NPAS2Q99743 AC015688.2-201ENST00000584523 262 ntBASIC2.97□□□□□ -1.93
NPAS2Q99743 AC083760.1-201ENST00000589621 670 ntBASIC2.97□□□□□ -1.93
NPAS2Q99743 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC2.97□□□□□ -1.93
NPAS2Q99743 AC013444.2-201ENST00000603317 787 ntBASIC2.97□□□□□ -1.93
NPAS2Q99743 AC093673.2-201ENST00000609674 331 ntBASIC2.97□□□□□ -1.93
NPAS2Q99743 AC138932.5-201ENST00000617759 563 ntBASIC2.97□□□□□ -1.93
NPAS2Q99743 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC2.97□□□□□ -1.93
NPAS2Q99743 AC018692.3-201ENST00000623929 123 ntBASIC2.97□□□□□ -1.93
NPAS2Q99743 AP003476.1-201ENST00000623984 516 ntBASIC2.97□□□□□ -1.93
NPAS2Q99743 AC010872.1-201ENST00000624225 675 ntBASIC2.97□□□□□ -1.93
NPAS2Q99743 AC084035.1-201ENST00000634543 607 ntBASIC2.97□□□□□ -1.93
NPAS2Q99743 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC2.97□□□□□ -1.93
NPAS2Q99743 AC009812.4-201ENST00000569134 1805 ntBASIC2.97□□□□□ -1.93
NPAS2Q99743 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
NPAS2Q99743 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC2.97□□□□□ -1.93
NPAS2Q99743 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
NPAS2Q99743 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC2.96□□□□□ -1.94
NPAS2Q99743 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
NPAS2Q99743 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC2.96□□□□□ -1.94
NPAS2Q99743 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
NPAS2Q99743 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC2.96□□□□□ -1.94
NPAS2Q99743 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
NPAS2Q99743 SNRPEP2-201ENST00000397592 279 ntBASIC2.96□□□□□ -1.94
NPAS2Q99743 AL356131.1-201ENST00000405826 414 ntBASIC2.96□□□□□ -1.94
NPAS2Q99743 AL450338.1-201ENST00000407987 512 ntBASIC2.96□□□□□ -1.94
NPAS2Q99743 RNU2-43P-201ENST00000410306 190 ntBASIC2.96□□□□□ -1.94
NPAS2Q99743 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC2.96□□□□□ -1.94
NPAS2Q99743 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
NPAS2Q99743 AL390023.1-201ENST00000428836 262 ntBASIC2.96□□□□□ -1.94
NPAS2Q99743 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC2.96□□□□□ -1.94
NPAS2Q99743 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC2.96□□□□□ -1.94
NPAS2Q99743 NDUFB4P6-201ENST00000436819 366 ntBASIC2.96□□□□□ -1.94
NPAS2Q99743 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC2.96□□□□□ -1.94
NPAS2Q99743 GAPDHP27-201ENST00000447427 1020 ntBASIC2.96□□□□□ -1.94
NPAS2Q99743 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC2.96□□□□□ -1.94
NPAS2Q99743 MTND3P3-201ENST00000505004 126 ntBASIC2.96□□□□□ -1.94
NPAS2Q99743 AC087808.1-201ENST00000520501 361 ntBASIC2.96□□□□□ -1.94
NPAS2Q99743 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
NPAS2Q99743 OR10V3P-201ENST00000525712 725 ntBASIC2.96□□□□□ -1.94
NPAS2Q99743 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
NPAS2Q99743 AC024224.1-201ENST00000538284 609 ntBASIC2.96□□□□□ -1.94
NPAS2Q99743 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC2.96□□□□□ -1.94
NPAS2Q99743 MIR3921-201ENST00000577308 85 ntBASIC2.96□□□□□ -1.94
NPAS2Q99743 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC2.96□□□□□ -1.94
NPAS2Q99743 MIR4506-201ENST00000584693 77 ntBASIC2.96□□□□□ -1.94
NPAS2Q99743 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC2.96□□□□□ -1.94
NPAS2Q99743 AC068620.3-201ENST00000602749 560 ntBASIC2.96□□□□□ -1.94
NPAS2Q99743 AC012119.1-201ENST00000603184 222 ntBASIC2.96□□□□□ -1.94
NPAS2Q99743 TUG1_1.1-201ENST00000610654 145 ntBASIC2.96□□□□□ -1.94
NPAS2Q99743 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC2.96□□□□□ -1.94
NPAS2Q99743 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC2.96□□□□□ -1.94
NPAS2Q99743 AC120349.2-201ENST00000625002 298 ntBASIC2.96□□□□□ -1.94
NPAS2Q99743 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC2.96□□□□□ -1.94
NPAS2Q99743 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC2.96□□□□□ -1.94
NPAS2Q99743 MIR1322-201ENST00000638013 71 ntBASIC2.96□□□□□ -1.94
NPAS2Q99743 AP005901.5-201ENST00000545779 1796 ntBASIC2.96□□□□□ -1.94
NPAS2Q99743 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC2.96□□□□□ -1.94
NPAS2Q99743 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC2.96□□□□□ -1.94
NPAS2Q99743 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC2.96□□□□□ -1.94
NPAS2Q99743 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC2.96□□□□□ -1.94
NPAS2Q99743 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC2.95□□□□□ -1.94
NPAS2Q99743 AC108206.1-201ENST00000570186 4159 ntBASIC2.95□□□□□ -1.94
NPAS2Q99743 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC2.95□□□□□ -1.94
NPAS2Q99743 AC233263.6-201ENST00000631132 1963 ntBASIC2.95□□□□□ -1.94
NPAS2Q99743 DEFB108F-201ENST00000344638 222 ntBASIC2.95□□□□□ -1.94
NPAS2Q99743 Y_RNA.111-201ENST00000363248 100 ntBASIC2.95□□□□□ -1.94
NPAS2Q99743 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC2.95□□□□□ -1.94
NPAS2Q99743 RNU6-1257P-201ENST00000384625 110 ntBASIC2.95□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 77.4 ms