Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
NR1H4Q96RI1 MRPL42P2-201ENST00000403169 426 ntBASIC3.67□□□□□ -1.82
NR1H4Q96RI1 SNORA11F-201ENST00000408237 128 ntBASIC3.67□□□□□ -1.82
NR1H4Q96RI1 RNU6-55P-201ENST00000411092 107 ntBASIC3.67□□□□□ -1.82
NR1H4Q96RI1 RNU6-954P-201ENST00000411355 107 ntBASIC3.67□□□□□ -1.82
NR1H4Q96RI1 AC017079.2-201ENST00000416102 485 ntBASIC3.67□□□□□ -1.82
NR1H4Q96RI1 UBE2FP1-201ENST00000416536 447 ntBASIC3.67□□□□□ -1.82
NR1H4Q96RI1 AC006366.1-201ENST00000422002 759 ntBASIC3.67□□□□□ -1.82
NR1H4Q96RI1 PPP1R11P2-201ENST00000423543 382 ntBASIC3.67□□□□□ -1.82
NR1H4Q96RI1 RPL7L1P10-201ENST00000427790 463 ntBASIC3.67□□□□□ -1.82
NR1H4Q96RI1 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC3.67□□□□□ -1.82
NR1H4Q96RI1 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC3.67□□□□□ -1.82
NR1H4Q96RI1 AL662791.1-201ENST00000441992 928 ntBASIC3.67□□□□□ -1.82
NR1H4Q96RI1 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC3.67□□□□□ -1.82
NR1H4Q96RI1 AL162389.1-201ENST00000449233 177 ntBASIC3.67□□□□□ -1.82
NR1H4Q96RI1 AC010401.1-201ENST00000463867 348 ntBASIC3.67□□□□□ -1.82
NR1H4Q96RI1 AC109327.1-201ENST00000471666 403 ntBASIC3.67□□□□□ -1.82
NR1H4Q96RI1 RPL29P14-201ENST00000495837 428 ntBASIC3.67□□□□□ -1.82
NR1H4Q96RI1 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
NR1H4Q96RI1 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC3.67□□□□□ -1.82
NR1H4Q96RI1 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC3.67□□□□□ -1.82
NR1H4Q96RI1 AC010265.1-201ENST00000513509 211 ntBASIC3.67□□□□□ -1.82
NR1H4Q96RI1 GMPSP1-201ENST00000514075 579 ntBASIC3.67□□□□□ -1.82
NR1H4Q96RI1 PAICSP4-201ENST00000517543 1253 ntBASIC3.67□□□□□ -1.82
NR1H4Q96RI1 AP002748.2-201ENST00000528671 348 ntBASIC3.67□□□□□ -1.82
NR1H4Q96RI1 AP002453.2-201ENST00000533503 320 ntBASIC3.67□□□□□ -1.82
NR1H4Q96RI1 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC3.67□□□□□ -1.82
NR1H4Q96RI1 AL133153.1-201ENST00000557756 303 ntBASIC3.67□□□□□ -1.82
NR1H4Q96RI1 AC055876.1-202ENST00000567053 138 ntBASIC3.67□□□□□ -1.82
NR1H4Q96RI1 AC007448.1-201ENST00000582714 234 ntBASIC3.67□□□□□ -1.82
NR1H4Q96RI1 BDH2P1-201ENST00000602288 736 ntBASIC3.67□□□□□ -1.82
NR1H4Q96RI1 AC239868.4-201ENST00000608318 671 ntBASIC3.67□□□□□ -1.82
NR1H4Q96RI1 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC3.67□□□□□ -1.82
NR1H4Q96RI1 AL355472.4-201ENST00000610233 626 ntBASIC3.67□□□□□ -1.82
NR1H4Q96RI1 AL161616.1-201ENST00000611867 286 ntBASIC3.67□□□□□ -1.82
NR1H4Q96RI1 AC024941.1-201ENST00000612250 334 ntBASIC3.67□□□□□ -1.82
NR1H4Q96RI1 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
NR1H4Q96RI1 AC025594.3-201ENST00000613068 790 ntBASIC3.67□□□□□ -1.82
NR1H4Q96RI1 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC3.67□□□□□ -1.82
NR1H4Q96RI1 AC100827.5-201ENST00000615883 426 ntBASIC3.67□□□□□ -1.82
NR1H4Q96RI1 SNORA50A-202ENST00000629536 136 ntBASIC3.67□□□□□ -1.82
NR1H4Q96RI1 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.67□□□□□ -1.82
NR1H4Q96RI1 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
NR1H4Q96RI1 AL021368.2-201ENST00000606125 5352 ntBASIC3.67□□□□□ -1.82
NR1H4Q96RI1 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC3.67□□□□□ -1.82
NR1H4Q96RI1 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
NR1H4Q96RI1 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC3.67□□□□□ -1.82
NR1H4Q96RI1 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC3.67□□□□□ -1.82
NR1H4Q96RI1 AL353746.1-201ENST00000566293 6881 ntBASIC3.66□□□□□ -1.82
NR1H4Q96RI1 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
NR1H4Q96RI1 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
NR1H4Q96RI1 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
NR1H4Q96RI1 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
NR1H4Q96RI1 RNA5SP87-201ENST00000384155 118 ntBASIC3.66□□□□□ -1.82
NR1H4Q96RI1 RPL21P32-201ENST00000419877 477 ntBASIC3.66□□□□□ -1.82
NR1H4Q96RI1 RPL23AP38-201ENST00000423801 469 ntBASIC3.66□□□□□ -1.82
NR1H4Q96RI1 SLC44A3-AS1-205ENST00000424505 612 ntBASIC3.66□□□□□ -1.82
NR1H4Q96RI1 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
NR1H4Q96RI1 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC3.66□□□□□ -1.82
NR1H4Q96RI1 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC3.66□□□□□ -1.82
NR1H4Q96RI1 SETP5-201ENST00000437270 562 ntBASIC3.66□□□□□ -1.82
NR1H4Q96RI1 RPL23AP52-201ENST00000439311 478 ntBASIC3.66□□□□□ -1.82
NR1H4Q96RI1 RPL26P6-201ENST00000440913 438 ntBASIC3.66□□□□□ -1.82
NR1H4Q96RI1 ELOCP30-201ENST00000447108 299 ntBASIC3.66□□□□□ -1.82
NR1H4Q96RI1 AC073387.1-201ENST00000453261 709 ntBASIC3.66□□□□□ -1.82
NR1H4Q96RI1 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC3.66□□□□□ -1.82
NR1H4Q96RI1 AL122001.1-201ENST00000457027 370 ntBASIC3.66□□□□□ -1.82
NR1H4Q96RI1 snoU109.1-201ENST00000459339 135 ntBASIC3.66□□□□□ -1.82
NR1H4Q96RI1 RN7SL610P-201ENST00000463845 291 ntBASIC3.66□□□□□ -1.82
NR1H4Q96RI1 RPS23P3-201ENST00000470993 430 ntBASIC3.66□□□□□ -1.82
NR1H4Q96RI1 RPS4XP22-201ENST00000480755 780 ntBASIC3.66□□□□□ -1.82
NR1H4Q96RI1 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC3.66□□□□□ -1.82
NR1H4Q96RI1 CBX3P3-201ENST00000508108 532 ntBASIC3.66□□□□□ -1.82
NR1H4Q96RI1 RNU1-61P-201ENST00000516107 151 ntBASIC3.66□□□□□ -1.82
NR1H4Q96RI1 AP000873.5-201ENST00000533906 236 ntBASIC3.66□□□□□ -1.82
NR1H4Q96RI1 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC3.66□□□□□ -1.82
NR1H4Q96RI1 AC123904.2-201ENST00000548059 300 ntBASIC3.66□□□□□ -1.82
NR1H4Q96RI1 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC3.66□□□□□ -1.82
NR1H4Q96RI1 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC3.66□□□□□ -1.82
NR1H4Q96RI1 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC3.66□□□□□ -1.82
NR1H4Q96RI1 AP005205.1-201ENST00000563503 508 ntBASIC3.66□□□□□ -1.82
NR1H4Q96RI1 AC037471.2-201ENST00000564941 598 ntBASIC3.66□□□□□ -1.82
NR1H4Q96RI1 RPL23AP84-201ENST00000571193 464 ntBASIC3.66□□□□□ -1.82
NR1H4Q96RI1 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC3.66□□□□□ -1.82
NR1H4Q96RI1 AC105224.1-201ENST00000587055 421 ntBASIC3.66□□□□□ -1.82
NR1H4Q96RI1 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC3.66□□□□□ -1.82
NR1H4Q96RI1 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC3.66□□□□□ -1.82
NR1H4Q96RI1 AC138749.5-201ENST00000611461 208 ntBASIC3.66□□□□□ -1.82
NR1H4Q96RI1 TUG1_2.1-201ENST00000614234 87 ntBASIC3.66□□□□□ -1.82
NR1H4Q96RI1 MESTIT1_2.1-201ENST00000616328 235 ntBASIC3.66□□□□□ -1.82
NR1H4Q96RI1 AC009090.3-201ENST00000616553 565 ntBASIC3.66□□□□□ -1.82
NR1H4Q96RI1 AC116165.2-201ENST00000616705 206 ntBASIC3.66□□□□□ -1.82
NR1H4Q96RI1 AC104010.1-201ENST00000616889 150 ntBASIC3.66□□□□□ -1.82
NR1H4Q96RI1 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.66□□□□□ -1.82
NR1H4Q96RI1 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC3.66□□□□□ -1.82
NR1H4Q96RI1 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
NR1H4Q96RI1 AP003399.1-201ENST00000637534 361 ntBASIC3.66□□□□□ -1.82
NR1H4Q96RI1 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC3.66□□□□□ -1.82
NR1H4Q96RI1 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
NR1H4Q96RI1 AC007496.3-201ENST00000624987 3443 ntBASIC3.66□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 84.1 ms