Protein–RNA interactions for Protein: Q92994

BRF1, Transcription factor IIIB 90 kDa subunit, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1Q92994 AC103710.2-201ENST00000609912 942 ntBASIC5.14□□□□□ -1.59
BRF1Q92994 RMST_7.1-201ENST00000621935 268 ntBASIC5.14□□□□□ -1.59
BRF1Q92994 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC5.14□□□□□ -1.59
BRF1Q92994 AC055839.1-201ENST00000634467 498 ntBASIC5.14□□□□□ -1.59
BRF1Q92994 MIR1302-1-201ENST00000637932 143 ntBASIC5.14□□□□□ -1.59
BRF1Q92994 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC5.14□□□□□ -1.59
BRF1Q92994 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC5.14□□□□□ -1.59
BRF1Q92994 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
BRF1Q92994 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
BRF1Q92994 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
BRF1Q92994 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC5.14□□□□□ -1.59
BRF1Q92994 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
BRF1Q92994 AL451142.2-201ENST00000429076 2090 ntBASIC5.14□□□□□ -1.59
BRF1Q92994 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
BRF1Q92994 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
BRF1Q92994 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
BRF1Q92994 AC025031.4-201ENST00000621248 3271 ntBASIC5.13□□□□□ -1.59
BRF1Q92994 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
BRF1Q92994 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
BRF1Q92994 MIR331-201ENST00000362302 94 ntBASIC5.13□□□□□ -1.59
BRF1Q92994 Y_RNA.22-201ENST00000362492 102 ntBASIC5.13□□□□□ -1.59
BRF1Q92994 Y_RNA.367-201ENST00000365544 101 ntBASIC5.13□□□□□ -1.59
BRF1Q92994 MIR585-201ENST00000384887 94 ntBASIC5.13□□□□□ -1.59
BRF1Q92994 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
BRF1Q92994 AL583835.1-201ENST00000399570 407 ntBASIC5.13□□□□□ -1.59
BRF1Q92994 RNU6-193P-201ENST00000410977 107 ntBASIC5.13□□□□□ -1.59
BRF1Q92994 RN7SKP216-201ENST00000411050 312 ntBASIC5.13□□□□□ -1.59
BRF1Q92994 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC5.13□□□□□ -1.59
BRF1Q92994 MAP1LC3BP1-201ENST00000417653 379 ntBASIC5.13□□□□□ -1.59
BRF1Q92994 AL356387.2-201ENST00000422272 243 ntBASIC5.13□□□□□ -1.59
BRF1Q92994 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC5.13□□□□□ -1.59
BRF1Q92994 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC5.13□□□□□ -1.59
BRF1Q92994 AL353597.2-202ENST00000434901 373 ntBASIC5.13□□□□□ -1.59
BRF1Q92994 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC5.13□□□□□ -1.59
BRF1Q92994 AC127537.2-201ENST00000439258 465 ntBASIC5.13□□□□□ -1.59
BRF1Q92994 RPL21P89-201ENST00000444021 467 ntBASIC5.13□□□□□ -1.59
BRF1Q92994 MTND4P19-201ENST00000446659 478 ntBASIC5.13□□□□□ -1.59
BRF1Q92994 AC108059.3-201ENST00000456388 214 ntBASIC5.13□□□□□ -1.59
BRF1Q92994 AL049714.1-201ENST00000466686 347 ntBASIC5.13□□□□□ -1.59
BRF1Q92994 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
BRF1Q92994 AC026427.2-201ENST00000506228 536 ntBASIC5.13□□□□□ -1.59
BRF1Q92994 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC5.13□□□□□ -1.59
BRF1Q92994 RNU4ATAC8P-201ENST00000516196 109 ntBASIC5.13□□□□□ -1.59
BRF1Q92994 RNU6-1314P-201ENST00000517139 104 ntBASIC5.13□□□□□ -1.59
BRF1Q92994 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC5.13□□□□□ -1.59
BRF1Q92994 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC5.13□□□□□ -1.59
BRF1Q92994 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC5.13□□□□□ -1.59
BRF1Q92994 MGST1-215ENST00000540056 546 ntTSL 3 BASIC5.13□□□□□ -1.59
BRF1Q92994 PSMA3P-201ENST00000555485 635 ntBASIC5.13□□□□□ -1.59
BRF1Q92994 RPL21P12-201ENST00000559810 515 ntBASIC5.13□□□□□ -1.59
BRF1Q92994 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC5.13□□□□□ -1.59
BRF1Q92994 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC5.13□□□□□ -1.59
BRF1Q92994 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC5.13□□□□□ -1.59
BRF1Q92994 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC5.13□□□□□ -1.59
BRF1Q92994 AC007566.2-201ENST00000603642 413 ntBASIC5.13□□□□□ -1.59
BRF1Q92994 AL354984.3-201ENST00000604803 325 ntBASIC5.13□□□□□ -1.59
BRF1Q92994 AC113139.1-201ENST00000605049 239 ntBASIC5.13□□□□□ -1.59
BRF1Q92994 AC021646.1-201ENST00000605469 484 ntBASIC5.13□□□□□ -1.59
BRF1Q92994 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC5.13□□□□□ -1.59
BRF1Q92994 AC007546.1-201ENST00000619452 559 ntBASIC5.13□□□□□ -1.59
BRF1Q92994 CCL14-204ENST00000622526 472 ntTSL 3 BASIC5.13□□□□□ -1.59
BRF1Q92994 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
BRF1Q92994 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC5.13□□□□□ -1.59
BRF1Q92994 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC5.13□□□□□ -1.59
BRF1Q92994 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC5.13□□□□□ -1.59
BRF1Q92994 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
BRF1Q92994 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
BRF1Q92994 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC5.12□□□□□ -1.59
BRF1Q92994 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
BRF1Q92994 AC004972.1-201ENST00000623934 2209 ntBASIC5.12□□□□□ -1.59
BRF1Q92994 AL645937.1-201ENST00000641739 1652 ntBASIC5.12□□□□□ -1.59
BRF1Q92994 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
BRF1Q92994 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
BRF1Q92994 OR5P1P-201ENST00000299512 925 ntBASIC5.12□□□□□ -1.59
BRF1Q92994 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
BRF1Q92994 U3.11-201ENST00000364476 212 ntBASIC5.12□□□□□ -1.59
BRF1Q92994 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
BRF1Q92994 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
BRF1Q92994 MIR558-201ENST00000384920 94 ntBASIC5.12□□□□□ -1.59
BRF1Q92994 MIR454-201ENST00000390180 115 ntBASIC5.12□□□□□ -1.59
BRF1Q92994 TXNP7-201ENST00000406296 293 ntBASIC5.12□□□□□ -1.59
BRF1Q92994 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC5.12□□□□□ -1.59
BRF1Q92994 RNU2-15P-201ENST00000410692 191 ntBASIC5.12□□□□□ -1.59
BRF1Q92994 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC5.12□□□□□ -1.59
BRF1Q92994 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC5.12□□□□□ -1.59
BRF1Q92994 AL645937.1-202ENST00000421799 937 ntBASIC5.12□□□□□ -1.59
BRF1Q92994 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC5.12□□□□□ -1.59
BRF1Q92994 CHIAP3-201ENST00000423668 1133 ntBASIC5.12□□□□□ -1.59
BRF1Q92994 RPL12P34-201ENST00000424532 479 ntBASIC5.12□□□□□ -1.59
BRF1Q92994 OR4F13P-201ENST00000428478 931 ntBASIC5.12□□□□□ -1.59
BRF1Q92994 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC5.12□□□□□ -1.59
BRF1Q92994 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC5.12□□□□□ -1.59
BRF1Q92994 ATP6V0E1P2-201ENST00000441771 245 ntBASIC5.12□□□□□ -1.59
BRF1Q92994 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC5.12□□□□□ -1.59
BRF1Q92994 AC079804.1-201ENST00000461922 436 ntBASIC5.12□□□□□ -1.59
BRF1Q92994 RPS4XP10-201ENST00000465034 731 ntBASIC5.12□□□□□ -1.59
BRF1Q92994 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
BRF1Q92994 RN7SL812P-201ENST00000493791 279 ntBASIC5.12□□□□□ -1.59
BRF1Q92994 AL139099.1-201ENST00000497398 403 ntBASIC5.12□□□□□ -1.59
BRF1Q92994 Y_RNA.691-201ENST00000516611 103 ntBASIC5.12□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms